RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 TUBB2BQ9BVA1 445 aa12.08□□□□□ -0.48
SHANK2-219ENST00000606715 COL4A3BPQ9Y5P4 624 aa12.08□□□□□ -0.48
SHANK2-219ENST00000606715 NRXN1Q9ULB1 1477 aa12.08□□□□□ -0.48
SHANK2-219ENST00000606715 KRT33BQ14525 404 aa12.08□□□□□ -0.48
SHANK2-219ENST00000606715 ARMCX5Q6P1M9 558 aa12.08□□□□□ -0.48
SHANK2-219ENST00000606715 FAM178BQ8IXR5 827 aa12.08□□□□□ -0.48
SHANK2-219ENST00000606715 ATP2A3Q93084 1043 aa12.08□□□□□ -0.48
SHANK2-219ENST00000606715 ANKRD36BP1Q96IX9 119 aa12.08□□□□□ -0.48
SHANK2-219ENST00000606715 FOXP1Q9H334 677 aaPredicted RBP12.08□□□□□ -0.48
SHANK2-219ENST00000606715 PIDD1Q9HB75 910 aa12.08□□□□□ -0.48
SHANK2-219ENST00000606715 ADAMTS13Q76LX8 1427 aa12.07□□□□□ -0.48
SHANK2-219ENST00000606715 NEXMIFQ5QGS0 1516 aa12.07□□□□□ -0.48
SHANK2-219ENST00000606715 JAK2O60674 1132 aa12.07□□□□□ -0.48
SHANK2-219ENST00000606715 PDIA3P30101 505 aaKnown RBP12.07□□□□□ -0.48
SHANK2-219ENST00000606715 TMEM179Q6ZVK1 233 aa12.07□□□□□ -0.48
SHANK2-219ENST00000606715 IGSF22Q8N9C0 903 aa12.07□□□□□ -0.48
SHANK2-219ENST00000606715 AK8Q96MA6 479 aa12.07□□□□□ -0.48
SHANK2-219ENST00000606715 TRIM56Q9BRZ2 755 aaKnown RBP12.07□□□□□ -0.48
SHANK2-219ENST00000606715 MTA3Q9BTC8 594 aa12.07□□□□□ -0.48
SHANK2-219ENST00000606715 GDF11O95390 407 aa12.07□□□□□ -0.48
SHANK2-219ENST00000606715 PRPSAP1Q14558 356 aa12.07□□□□□ -0.48
SHANK2-219ENST00000606715 ARFGAP2Q8N6H7 521 aa12.07□□□□□ -0.48
SHANK2-219ENST00000606715 LBHD1Q9BQE6 289 aaPredicted RBP12.07□□□□□ -0.48
SHANK2-219ENST00000606715 BRD1O95696 1058 aa12.07□□□□□ -0.48
SHANK2-219ENST00000606715 PIK3CAP42336 1068 aa12.07□□□□□ -0.48
SHANK2-219ENST00000606715 PSMD6Q15008 389 aa12.07□□□□□ -0.48
SHANK2-219ENST00000606715 INTS8Q75QN2 995 aaKnown RBP12.07□□□□□ -0.48
SHANK2-219ENST00000606715 SP8Q8IXZ3 490 aa12.07□□□□□ -0.48
SHANK2-219ENST00000606715 TPCN1Q9ULQ1 816 aa12.07□□□□□ -0.48
SHANK2-219ENST00000606715 RFX7Q2KHR2 1363 aa12.07□□□□□ -0.48
SHANK2-219ENST00000606715 LIFRP42702 1097 aa12.07□□□□□ -0.48
SHANK2-219ENST00000606715 STAT2P52630 851 aa12.07□□□□□ -0.48
SHANK2-219ENST00000606715 HLFQ16534 295 aa12.07□□□□□ -0.48
SHANK2-219ENST00000606715 MIGA2Q7L4E1 593 aa12.07□□□□□ -0.48
SHANK2-219ENST00000606715 DGKHQ86XP1 1220 aa12.07□□□□□ -0.48
SHANK2-219ENST00000606715 SYCE1Q8N0S2 351 aa12.07□□□□□ -0.48
SHANK2-219ENST00000606715 PRDM5Q9NQX1 630 aaPredicted RBP12.07□□□□□ -0.48
SHANK2-219ENST00000606715 RSPH14Q9UHP6 348 aa12.07□□□□□ -0.48
SHANK2-219ENST00000606715 A6NJR5 290 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 ADD1P35611 737 aaKnown RBP12.06□□□□□ -0.48
SHANK2-219ENST00000606715 RASGRF1Q13972 1273 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 POMGNT1Q8WZA1 660 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 MECOMQ03112 1051 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 APOA5Q6Q788 366 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 MTIF3Q9H2K0 278 aaKnown RBP12.06□□□□□ -0.48
SHANK2-219ENST00000606715 PREX1Q8TCU6 1659 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 XRCC5P13010 732 aaKnown RBP12.06□□□□□ -0.48
SHANK2-219ENST00000606715 PPFIA1Q13136 1202 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 SFMBT2Q5VUG0 894 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 CYP26C1Q6V0L0 522 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 SYNE4Q8N205 404 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 UBN1Q9NPG3 1134 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 MINPP1Q9UNW1 487 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 GNAT1P11488 350 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 CMA1P23946 247 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 TECP42680 631 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 UBXN2AP68543 259 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 CCDC105Q8IYK2 499 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 MYOCDQ8IZQ8 938 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 FBXO18Q8NFZ0 1043 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 BAG1Q99933 345 aaPredicted RBP12.06□□□□□ -0.48
SHANK2-219ENST00000606715 METTL14Q9HCE5 456 aaKnown RBP12.06□□□□□ -0.48
SHANK2-219ENST00000606715 IMPACTQ9P2X3 320 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 PCDHA4Q9UN74 947 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 KCNH4Q9UQ05 1017 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 TTC36A6NLP5 189 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 I3L4J1 428 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 CACTINQ8WUQ7 758 aaKnown RBP12.06□□□□□ -0.48
SHANK2-219ENST00000606715 PPME1Q9Y570 386 aa12.06□□□□□ -0.48
SHANK2-219ENST00000606715 CCDC121Q6ZUS5 278 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 PPP4R1Q8TF05 950 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 CCDC127Q96BQ5 260 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 ZNF577Q9BSK1 485 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 TRIM31Q9BZY9 425 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 MOSPD1Q9UJG1 213 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 ZNF233A6NK53 670 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 WDR64B1ANS9 1081 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 BNIP3LO60238 219 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 PPP2R3CQ969Q6 453 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 TLR7Q9NYK1 1049 aaKnown RBP12.05□□□□□ -0.48
SHANK2-219ENST00000606715 IGKV5-2P06315 115 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 GSTA1P08263 222 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 GSTA2P09210 222 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 RHOXF2BP0C7M4 288 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 PDE6CP51160 858 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 GTF2A1P52655 376 aaPredicted RBP12.05□□□□□ -0.48
SHANK2-219ENST00000606715 MFSD14CQ5VZR4 134 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 RNF219Q5W0B1 726 aaPredicted RBP12.05□□□□□ -0.48
SHANK2-219ENST00000606715 CRAMP1Q96RY5 1269 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 RHOXF2Q9BQY4 288 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 FBXO40Q9UH90 709 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 RIPOR2Q9Y4F9 1068 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 HNRNPDLO14979 420 aaKnown RBP12.05□□□□□ -0.48
SHANK2-219ENST00000606715 NFKBIAP25963 317 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 DYNLL1P63167 89 aaKnown RBP12.05□□□□□ -0.48
SHANK2-219ENST00000606715 SYDE2Q5VT97 1194 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 CTAGE3PQ8IX95 158 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 LCORLQ8N3X6 602 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 RAET1EQ8TD07 263 aa12.05□□□□□ -0.48
SHANK2-219ENST00000606715 TTC1Q99614 292 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms