RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 PPP6R2O75170 966 aa21.13■□□□□ 0.97
SSBP4-212ENST00000601919 PRPF40AO75400 957 aaKnown RBP21.13■□□□□ 0.97
SSBP4-212ENST00000601919 MCM7P33993 719 aa21.13■□□□□ 0.97
SSBP4-212ENST00000601919 ARHGAP4P98171 946 aa21.13■□□□□ 0.97
SSBP4-212ENST00000601919 ZNF174Q15697 407 aa21.13■□□□□ 0.97
SSBP4-212ENST00000601919 MOXD1Q6UVY6 613 aa21.13■□□□□ 0.97
SSBP4-212ENST00000601919 A1CFQ9NQ94 594 aaKnown RBP21.13■□□□□ 0.97
SSBP4-212ENST00000601919 CYP39A1Q9NYL5 469 aa21.13■□□□□ 0.97
SSBP4-212ENST00000601919 CYP3A4P08684 503 aa21.12■□□□□ 0.97
SSBP4-212ENST00000601919 ME1P48163 572 aa21.12■□□□□ 0.97
SSBP4-212ENST00000601919 NBR1Q14596 966 aa21.12■□□□□ 0.97
SSBP4-212ENST00000601919 PTPAQ15257 358 aa21.12■□□□□ 0.97
SSBP4-212ENST00000601919 Q3C1V9 767 aa21.12■□□□□ 0.97
SSBP4-212ENST00000601919 PPP4R3AQ6IN85 833 aa21.12■□□□□ 0.97
SSBP4-212ENST00000601919 SLC30A10Q6XR72 485 aa21.12■□□□□ 0.97
SSBP4-212ENST00000601919 NEMFO60524 1076 aa21.11■□□□□ 0.97
SSBP4-212ENST00000601919 PEX10O60683 326 aa21.11■□□□□ 0.97
SSBP4-212ENST00000601919 FCER1AP12319 257 aa21.11■□□□□ 0.97
SSBP4-212ENST00000601919 KCTD2Q14681 263 aa21.11■□□□□ 0.97
SSBP4-212ENST00000601919 WDR78Q5VTH9 848 aa21.11■□□□□ 0.97
SSBP4-212ENST00000601919 MMP19Q99542 508 aa21.11■□□□□ 0.97
SSBP4-212ENST00000601919 FRMPD4Q14CM0 1322 aa21.1■□□□□ 0.97
SSBP4-212ENST00000601919 RPTORQ8N122 1335 aa21.1■□□□□ 0.97
SSBP4-212ENST00000601919 ADGRA2Q96PE1 1338 aa21.1■□□□□ 0.97
SSBP4-212ENST00000601919 CYP3A7-CYP3A51PA0A087WV96 503 aa21.1■□□□□ 0.97
SSBP4-212ENST00000601919 B4DLN1 442 aa21.1■□□□□ 0.97
SSBP4-212ENST00000601919 CA12O43570 354 aa21.1■□□□□ 0.97
SSBP4-212ENST00000601919 TLR2O60603 784 aa21.1■□□□□ 0.97
SSBP4-212ENST00000601919 CYP3A7P24462 503 aa21.1■□□□□ 0.97
SSBP4-212ENST00000601919 MAPK4P31152 587 aa21.1■□□□□ 0.97
SSBP4-212ENST00000601919 MAP2K2P36507 400 aa21.1■□□□□ 0.97
SSBP4-212ENST00000601919 ZNF76P36508 570 aa21.1■□□□□ 0.97
SSBP4-212ENST00000601919 UBE2HP62256 183 aa21.1■□□□□ 0.97
SSBP4-212ENST00000601919 PTGDRQ13258 359 aa21.1■□□□□ 0.97
SSBP4-212ENST00000601919 ARHGEF16Q5VV41 709 aa21.1■□□□□ 0.97
SSBP4-212ENST00000601919 XRRA1Q6P2D8 792 aa21.1■□□□□ 0.97
SSBP4-212ENST00000601919 NSUN6Q8TEA1 469 aaKnown RBP21.1■□□□□ 0.97
SSBP4-212ENST00000601919 CRYGNQ8WXF5 182 aa21.1■□□□□ 0.97
SSBP4-212ENST00000601919 FERMT2Q96AC1 680 aa21.1■□□□□ 0.97
SSBP4-212ENST00000601919 RMDN3Q96TC7 470 aa21.1■□□□□ 0.97
SSBP4-212ENST00000601919 MPHOSPH6Q99547 160 aaKnown RBP21.1■□□□□ 0.97
SSBP4-212ENST00000601919 LMBRD1Q9NUN5 540 aa21.1■□□□□ 0.97
SSBP4-212ENST00000601919 IVNS1ABPQ9Y6Y0 642 aa21.1■□□□□ 0.97
SSBP4-212ENST00000601919 STRNO43815 780 aa21.09■□□□□ 0.97
SSBP4-212ENST00000601919 CIITAP33076 1130 aa21.09■□□□□ 0.97
SSBP4-212ENST00000601919 ATP2C1P98194 919 aaPredicted RBP21.09■□□□□ 0.97
SSBP4-212ENST00000601919 ARL6IP4Q66PJ3 421 aaKnown RBP21.09■□□□□ 0.97
SSBP4-212ENST00000601919 ABRAQ8N0Z2 381 aa21.09■□□□□ 0.97
SSBP4-212ENST00000601919 KRI1Q8N9T8 703 aaKnown RBP21.09■□□□□ 0.97
SSBP4-212ENST00000601919 DNERQ8NFT8 737 aa21.09■□□□□ 0.97
SSBP4-212ENST00000601919 TAAR1Q96RJ0 339 aa21.09■□□□□ 0.97
SSBP4-212ENST00000601919 PXMP2Q9NR77 195 aa21.09■□□□□ 0.97
SSBP4-212ENST00000601919 COL20A1Q9P218 1284 aa21.09■□□□□ 0.97
SSBP4-212ENST00000601919 ADD3Q9UEY8 706 aaKnown RBP21.09■□□□□ 0.97
SSBP4-212ENST00000601919 DDX25Q9UHL0 483 aaKnown RBP21.09■□□□□ 0.97
SSBP4-212ENST00000601919 ZNFX1Q9P2E3 1918 aaKnown RBP21.08■□□□□ 0.97
SSBP4-212ENST00000601919 POTEB2H3BUK9 544 aa21.08■□□□□ 0.97
SSBP4-212ENST00000601919 CUTAO60888 179 aa21.08■□□□□ 0.97
SSBP4-212ENST00000601919 AOC2O75106 756 aa21.08■□□□□ 0.97
SSBP4-212ENST00000601919 BCRP11274 1271 aa21.08■□□□□ 0.97
SSBP4-212ENST00000601919 PCNX4Q63HM2 1172 aa21.08■□□□□ 0.97
SSBP4-212ENST00000601919 ZIC5Q96T25 663 aa21.08■□□□□ 0.97
SSBP4-212ENST00000601919 CPA4Q9UI42 421 aa21.08■□□□□ 0.97
SSBP4-212ENST00000601919 PLXNB2O15031 1838 aa21.07■□□□□ 0.96
SSBP4-212ENST00000601919 WNT7AO00755 349 aa21.07■□□□□ 0.96
SSBP4-212ENST00000601919 MARCKSP29966 332 aaPredicted RBP21.07■□□□□ 0.96
SSBP4-212ENST00000601919 PRPHP41219 470 aa21.07■□□□□ 0.96
SSBP4-212ENST00000601919 CRHR2Q13324 411 aa21.07■□□□□ 0.96
SSBP4-212ENST00000601919 CALCRLQ16602 461 aa21.07■□□□□ 0.96
SSBP4-212ENST00000601919 SKOR2Q2VWA4 1001 aaPredicted RBP21.07■□□□□ 0.96
SSBP4-212ENST00000601919 ADALQ6DHV7 355 aa21.07■□□□□ 0.96
SSBP4-212ENST00000601919 C17orf99Q6UX52 265 aa21.07■□□□□ 0.96
SSBP4-212ENST00000601919 MBOAT7Q96N66 472 aa21.07■□□□□ 0.96
SSBP4-212ENST00000601919 IWS1Q96ST2 819 aa21.07■□□□□ 0.96
SSBP4-212ENST00000601919 PORCNQ9H237 461 aa21.07■□□□□ 0.96
SSBP4-212ENST00000601919 EFCC1Q9HA90 598 aa21.07■□□□□ 0.96
SSBP4-212ENST00000601919 PCDHA7Q9UN72 937 aa21.07■□□□□ 0.96
SSBP4-212ENST00000601919 SRPRBQ9Y5M8 271 aaKnown RBP21.07■□□□□ 0.96
SSBP4-212ENST00000601919 MARCH6O60337 910 aa21.06■□□□□ 0.96
SSBP4-212ENST00000601919 TDP2O95551 362 aa21.06■□□□□ 0.96
SSBP4-212ENST00000601919 MBD3O95983 291 aa21.06■□□□□ 0.96
SSBP4-212ENST00000601919 OR52Z1P0C646 297 aa21.06■□□□□ 0.96
SSBP4-212ENST00000601919 EIF2AK2P19525 551 aaKnown RBP21.06■□□□□ 0.96
SSBP4-212ENST00000601919 PTPREP23469 700 aa21.06■□□□□ 0.96
SSBP4-212ENST00000601919 CCND2P30279 289 aa21.06■□□□□ 0.96
SSBP4-212ENST00000601919 SETQ01105 290 aaPredicted RBP21.06■□□□□ 0.96
SSBP4-212ENST00000601919 PGM5Q15124 567 aa21.06■□□□□ 0.96
SSBP4-212ENST00000601919 Q4G0T1 1027 aa21.06■□□□□ 0.96
SSBP4-212ENST00000601919 PDCD2LQ9BRP1 358 aa21.06■□□□□ 0.96
SSBP4-212ENST00000601919 LOC102724159A0A0B4J2E5 919 aa21.05■□□□□ 0.96
SSBP4-212ENST00000601919 A0A1W2PQ27 194 aa21.05■□□□□ 0.96
SSBP4-212ENST00000601919 A0A1W2PQ64 194 aa21.05■□□□□ 0.96
SSBP4-212ENST00000601919 A0A1W2PQD8 194 aa21.05■□□□□ 0.96
SSBP4-212ENST00000601919 TBX3O15119 743 aa21.05■□□□□ 0.96
SSBP4-212ENST00000601919 STAM2O75886 525 aa21.05■□□□□ 0.96
SSBP4-212ENST00000601919 VEGFBP49765 207 aa21.05■□□□□ 0.96
SSBP4-212ENST00000601919 PWP2Q15269 919 aaKnown RBP21.05■□□□□ 0.96
SSBP4-212ENST00000601919 CEP55Q53EZ4 464 aa21.05■□□□□ 0.96
SSBP4-212ENST00000601919 DTHD1Q6ZMT9 781 aa21.05■□□□□ 0.96
SSBP4-212ENST00000601919 NIPA1Q7RTP0 329 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms