RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 LCTP09848 1927 aa21.69■■□□□ 1.06
CCDC9-205ENST00000600117 DNAJC25-GNG10A0A024R161 153 aa21.69■■□□□ 1.06
CCDC9-205ENST00000600117 COL6A1P12109 1028 aa21.69■■□□□ 1.06
CCDC9-205ENST00000600117 ADORA2AP29274 412 aa21.69■■□□□ 1.06
CCDC9-205ENST00000600117 KCTD2Q14681 263 aa21.69■■□□□ 1.06
CCDC9-205ENST00000600117 RGS22Q8NE09 1264 aa21.69■■□□□ 1.06
CCDC9-205ENST00000600117 MAF1Q9H063 256 aa21.69■■□□□ 1.06
CCDC9-205ENST00000600117 CYP39A1Q9NYL5 469 aa21.69■■□□□ 1.06
CCDC9-205ENST00000600117 PRKAR2AP13861 404 aaKnown RBP21.68■■□□□ 1.06
CCDC9-205ENST00000600117 NAPAP54920 295 aa21.68■■□□□ 1.06
CCDC9-205ENST00000600117 NSMFQ6X4W1 530 aa21.68■■□□□ 1.06
CCDC9-205ENST00000600117 SLC30A10Q6XR72 485 aa21.68■■□□□ 1.06
CCDC9-205ENST00000600117 GUCD1Q96NT3 240 aa21.68■■□□□ 1.06
CCDC9-205ENST00000600117 VPS54Q9P1Q0 977 aa21.68■■□□□ 1.06
CCDC9-205ENST00000600117 COBLO75128 1261 aa21.67■■□□□ 1.06
CCDC9-205ENST00000600117 XRCC5P13010 732 aaKnown RBP21.67■■□□□ 1.06
CCDC9-205ENST00000600117 HMGN5P82970 282 aaKnown RBP21.67■■□□□ 1.06
CCDC9-205ENST00000600117 MAP2K5Q13163 448 aa21.67■■□□□ 1.06
CCDC9-205ENST00000600117 BAATQ14032 418 aaPredicted RBP21.67■■□□□ 1.06
CCDC9-205ENST00000600117 MCF2L2Q86YR7 1114 aa21.67■■□□□ 1.06
CCDC9-205ENST00000600117 ANKRD35Q8N283 1001 aa21.67■■□□□ 1.06
CCDC9-205ENST00000600117 SOCS4Q8WXH5 440 aa21.67■■□□□ 1.06
CCDC9-205ENST00000600117 NUDT12Q9BQG2 462 aa21.67■■□□□ 1.06
CCDC9-205ENST00000600117 ALG1Q9BT22 464 aa21.67■■□□□ 1.06
CCDC9-205ENST00000600117 SH3GLB2Q9NR46 395 aa21.67■■□□□ 1.06
CCDC9-205ENST00000600117 ESYT2A0FGR8 921 aa21.66■■□□□ 1.06
CCDC9-205ENST00000600117 PGK2P07205 417 aa21.66■■□□□ 1.06
CCDC9-205ENST00000600117 CYP2B6P20813 491 aa21.66■■□□□ 1.06
CCDC9-205ENST00000600117 HSD17B4P51659 736 aa21.66■■□□□ 1.06
CCDC9-205ENST00000600117 RPS6P62753 249 aaKnown RBP21.66■■□□□ 1.06
CCDC9-205ENST00000600117 RNF207Q6ZRF8 634 aa21.66■■□□□ 1.06
CCDC9-205ENST00000600117 FAM133AQ8N9E0 248 aa21.66■■□□□ 1.06
CCDC9-205ENST00000600117 WASF1Q92558 559 aa21.66■■□□□ 1.06
CCDC9-205ENST00000600117 FGD4Q96M96 766 aa21.66■■□□□ 1.06
CCDC9-205ENST00000600117 CDH23Q9H251 3354 aa21.65■■□□□ 1.06
CCDC9-205ENST00000600117 CFBP00751 764 aa21.65■■□□□ 1.06
CCDC9-205ENST00000600117 HOXC6P09630 235 aa21.65■■□□□ 1.06
CCDC9-205ENST00000600117 MDM2Q00987 491 aaPredicted RBP21.65■■□□□ 1.06
CCDC9-205ENST00000600117 CNTN2Q02246 1040 aa21.65■■□□□ 1.06
CCDC9-205ENST00000600117 LRRC26Q2I0M4 334 aa21.65■■□□□ 1.06
CCDC9-205ENST00000600117 ZNF792Q3KQV3 632 aa21.65■■□□□ 1.06
CCDC9-205ENST00000600117 TRMT44Q8IYL2 757 aaKnown RBP21.65■■□□□ 1.06
CCDC9-205ENST00000600117 SAMD3Q8N6K7 520 aa21.65■■□□□ 1.06
CCDC9-205ENST00000600117 SYTL5Q8TDW5 730 aaPredicted RBP21.65■■□□□ 1.06
CCDC9-205ENST00000600117 INTS4Q96HW7 963 aaKnown RBP21.65■■□□□ 1.06
CCDC9-205ENST00000600117 ZMYND12Q9H0C1 365 aa21.65■■□□□ 1.06
CCDC9-205ENST00000600117 GJB4Q9NTQ9 266 aa21.65■■□□□ 1.06
CCDC9-205ENST00000600117 COL20A1Q9P218 1284 aa21.65■■□□□ 1.06
CCDC9-205ENST00000600117 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.65■■□□□ 1.06
CCDC9-205ENST00000600117 PLXNA1Q9UIW2 1896 aa21.64■■□□□ 1.06
CCDC9-205ENST00000600117 SMCO2A6NFE2 343 aa21.64■■□□□ 1.05
CCDC9-205ENST00000600117 MEIS2O14770 477 aa21.64■■□□□ 1.05
CCDC9-205ENST00000600117 ADAMTS3O15072 1205 aa21.64■■□□□ 1.05
CCDC9-205ENST00000600117 RGS2P41220 211 aa21.64■■□□□ 1.05
CCDC9-205ENST00000600117 FAM177A1Q8N128 213 aaPredicted RBP21.64■■□□□ 1.05
CCDC9-205ENST00000600117 CCDC148Q8NFR7 591 aa21.64■■□□□ 1.05
CCDC9-205ENST00000600117 NPLOC4Q8TAT6 608 aa21.64■■□□□ 1.05
CCDC9-205ENST00000600117 CCDC12Q8WUD4 166 aaPredicted RBP21.64■■□□□ 1.05
CCDC9-205ENST00000600117 PURBQ96QR8 312 aaKnown RBP21.64■■□□□ 1.05
CCDC9-205ENST00000600117 PSTPIP2Q9H939 334 aa21.64■■□□□ 1.05
CCDC9-205ENST00000600117 RIC8AQ9NPQ8 531 aa21.64■■□□□ 1.05
CCDC9-205ENST00000600117 MAP3K20Q9NYL2 800 aaKnown RBP21.64■■□□□ 1.05
CCDC9-205ENST00000600117 ASTN1O14525 1302 aa21.63■■□□□ 1.05
CCDC9-205ENST00000600117 MUC3AQ02505 3323 aa21.63■■□□□ 1.05
CCDC9-205ENST00000600117 SOWAHBA6NEL2 793 aa21.63■■□□□ 1.05
CCDC9-205ENST00000600117 GCOM1H8Y6P7 765 aaPredicted RBP21.63■■□□□ 1.05
CCDC9-205ENST00000600117 PIK3CDO00329 1044 aa21.63■■□□□ 1.05
CCDC9-205ENST00000600117 POLR2MP0CAP2 368 aa21.63■■□□□ 1.05
CCDC9-205ENST00000600117 CALML3P27482 149 aa21.63■■□□□ 1.05
CCDC9-205ENST00000600117 HOXA13P31271 388 aaPredicted RBP21.63■■□□□ 1.05
CCDC9-205ENST00000600117 ADCY7P51828 1080 aa21.63■■□□□ 1.05
CCDC9-205ENST00000600117 NPY5RQ15761 445 aa21.63■■□□□ 1.05
CCDC9-205ENST00000600117 LHX8Q68G74 356 aa21.63■■□□□ 1.05
CCDC9-205ENST00000600117 USP17L6PQ6QN14 398 aa21.63■■□□□ 1.05
CCDC9-205ENST00000600117 APBA2Q99767 749 aa21.63■■□□□ 1.05
CCDC9-205ENST00000600117 SMC3Q9UQE7 1217 aa21.63■■□□□ 1.05
CCDC9-205ENST00000600117 FRMPD3Q5JV73 1810 aa21.62■■□□□ 1.05
CCDC9-205ENST00000600117 GJB2P29033 226 aa21.62■■□□□ 1.05
CCDC9-205ENST00000600117 CACNB2Q08289 660 aaPredicted RBP21.62■■□□□ 1.05
CCDC9-205ENST00000600117 UBE2SQ16763 222 aa21.62■■□□□ 1.05
CCDC9-205ENST00000600117 DPP9Q86TI2 863 aa21.62■■□□□ 1.05
CCDC9-205ENST00000600117 TEX2Q8IWB9 1127 aa21.62■■□□□ 1.05
CCDC9-205ENST00000600117 CUL5Q93034 780 aa21.62■■□□□ 1.05
CCDC9-205ENST00000600117 PHF20Q9BVI0 1012 aa21.62■■□□□ 1.05
CCDC9-205ENST00000600117 TSHZ2Q9NRE2 1034 aa21.62■■□□□ 1.05
CCDC9-205ENST00000600117 KCNJ14Q9UNX9 436 aa21.62■■□□□ 1.05
CCDC9-205ENST00000600117 DIS3Q9Y2L1 958 aaKnown RBP21.62■■□□□ 1.05
CCDC9-205ENST00000600117 IGHA2P01877 340 aa21.61■■□□□ 1.05
CCDC9-205ENST00000600117 CLK2P49760 499 aaKnown RBP21.61■■□□□ 1.05
CCDC9-205ENST00000600117 MRPL12P52815 198 aaKnown RBP21.61■■□□□ 1.05
CCDC9-205ENST00000600117 NLRP5P59047 1200 aa21.61■■□□□ 1.05
CCDC9-205ENST00000600117 DAGLBQ8NCG7 672 aa21.61■■□□□ 1.05
CCDC9-205ENST00000600117 MAML3Q96JK9 1138 aa21.61■■□□□ 1.05
CCDC9-205ENST00000600117 TAAR1Q96RJ0 339 aa21.61■■□□□ 1.05
CCDC9-205ENST00000600117 LBHD1Q9BQE6 289 aaPredicted RBP21.61■■□□□ 1.05
CCDC9-205ENST00000600117 C6orf50Q9HD87 102 aa21.61■■□□□ 1.05
CCDC9-205ENST00000600117 FOSBP53539 338 aa21.6■■□□□ 1.05
CCDC9-205ENST00000600117 CCL14Q16627 93 aa21.6■■□□□ 1.05
CCDC9-205ENST00000600117 FAM184AQ8NB25 1140 aa21.6■■□□□ 1.05
CCDC9-205ENST00000600117 FAM161BQ96MY7 647 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms