RNA–Protein interactions for RNA: ENST00000598972.5

DDX49-207, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-207ENST00000598972 SYNE3Q6ZMZ3 975 aa17.01■□□□□ 0.31
DDX49-207ENST00000598972 SGMS1Q86VZ5 419 aa17.01■□□□□ 0.31
DDX49-207ENST00000598972 RAB11FIP4Q86YS3 637 aa17.01■□□□□ 0.31
DDX49-207ENST00000598972 SRBD1Q8N5C6 995 aaKnown RBP17.01■□□□□ 0.31
DDX49-207ENST00000598972 SAMD3Q8N6K7 520 aa17.01■□□□□ 0.31
DDX49-207ENST00000598972 FANCBQ8NB91 859 aa17.01■□□□□ 0.31
DDX49-207ENST00000598972 KCNB2Q92953 911 aa17.01■□□□□ 0.31
DDX49-207ENST00000598972 TCEANC2Q96MN5 208 aa17.01■□□□□ 0.31
DDX49-207ENST00000598972 IWS1Q96ST2 819 aa17.01■□□□□ 0.31
DDX49-207ENST00000598972 SPZ1Q9BXG8 430 aa17.01■□□□□ 0.31
DDX49-207ENST00000598972 ZEB2O60315 1214 aa17■□□□□ 0.31
DDX49-207ENST00000598972 REC8O95072 547 aa17■□□□□ 0.31
DDX49-207ENST00000598972 PLEKHA8P1O95397 391 aa17■□□□□ 0.31
DDX49-207ENST00000598972 EIF2AK2P19525 551 aaKnown RBP17■□□□□ 0.31
DDX49-207ENST00000598972 HSPA4P34932 840 aa17■□□□□ 0.31
DDX49-207ENST00000598972 RANBP2P49792 3224 aaKnown RBP17■□□□□ 0.31
DDX49-207ENST00000598972 MDM2Q00987 491 aaPredicted RBP17■□□□□ 0.31
DDX49-207ENST00000598972 GHRHRQ02643 423 aa17■□□□□ 0.31
DDX49-207ENST00000598972 STXBP2Q15833 593 aa17■□□□□ 0.31
DDX49-207ENST00000598972 CMTR1Q8N1G2 835 aaKnown RBP17■□□□□ 0.31
DDX49-207ENST00000598972 SCFD2Q8WU76 684 aa17■□□□□ 0.31
DDX49-207ENST00000598972 RRP36Q96EU6 259 aaKnown RBP17■□□□□ 0.31
DDX49-207ENST00000598972 PRDM5Q9NQX1 630 aaPredicted RBP17■□□□□ 0.31
DDX49-207ENST00000598972 KIAA1217Q5T5P2 1943 aa17■□□□□ 0.31
DDX49-207ENST00000598972 GCOM1H8Y6P7 765 aaPredicted RBP16.99■□□□□ 0.31
DDX49-207ENST00000598972 PQBP1O60828 265 aaKnown RBP16.99■□□□□ 0.31
DDX49-207ENST00000598972 HMGB1P09429 215 aaKnown RBP16.99■□□□□ 0.31
DDX49-207ENST00000598972 POLR2MP0CAP2 368 aa16.99■□□□□ 0.31
DDX49-207ENST00000598972 HOXA13P31271 388 aaPredicted RBP16.99■□□□□ 0.31
DDX49-207ENST00000598972 SH3RF1Q7Z6J0 888 aa16.99■□□□□ 0.31
DDX49-207ENST00000598972 LBHD1Q9BQE6 289 aaPredicted RBP16.99■□□□□ 0.31
DDX49-207ENST00000598972 UBE2OQ9C0C9 1292 aaKnown RBP16.99■□□□□ 0.31
DDX49-207ENST00000598972 PXMP2Q9NR77 195 aa16.99■□□□□ 0.31
DDX49-207ENST00000598972 SNX14Q9Y5W7 946 aa16.99■□□□□ 0.31
DDX49-207ENST00000598972 A0A0U1RQG5 324 aaPredicted RBP16.98■□□□□ 0.31
DDX49-207ENST00000598972 A0A1W2PPC1 479 aa16.98■□□□□ 0.31
DDX49-207ENST00000598972 ARVCFO00192 962 aa16.98■□□□□ 0.31
DDX49-207ENST00000598972 NKRFO15226 690 aaKnown RBP eCLIP16.98■□□□□ 0.31
DDX49-207ENST00000598972 CABYRO75952 493 aa16.98■□□□□ 0.31
DDX49-207ENST00000598972 NR3C2P08235 984 aa16.98■□□□□ 0.31
DDX49-207ENST00000598972 TXNP10599 105 aaKnown RBP16.98■□□□□ 0.31
DDX49-207ENST00000598972 CDK7P50613 346 aa16.98■□□□□ 0.31
DDX49-207ENST00000598972 FXR1P51114 621 aaKnown RBP eCLIP16.98■□□□□ 0.31
DDX49-207ENST00000598972 TTLL4Q14679 1199 aa16.98■□□□□ 0.31
DDX49-207ENST00000598972 PPP2R5BQ15173 497 aa16.98■□□□□ 0.31
DDX49-207ENST00000598972 CXCL17Q6UXB2 119 aa16.98■□□□□ 0.31
DDX49-207ENST00000598972 SEPT14Q6ZU15 432 aa16.98■□□□□ 0.31
DDX49-207ENST00000598972 ANKRD33Q7Z3H0 272 aa16.98■□□□□ 0.31
DDX49-207ENST00000598972 MICU3Q86XE3 530 aa16.98■□□□□ 0.31
DDX49-207ENST00000598972 OR6J1Q8NGC5 347 aa16.98■□□□□ 0.31
DDX49-207ENST00000598972 COPS5Q92905 334 aa16.98■□□□□ 0.31
DDX49-207ENST00000598972 TOX2Q96NM4 488 aa16.98■□□□□ 0.31
DDX49-207ENST00000598972 PDLIM7Q9NR12 457 aa16.98■□□□□ 0.31
DDX49-207ENST00000598972 SEC63Q9UGP8 760 aaKnown RBP16.98■□□□□ 0.31
DDX49-207ENST00000598972 TRIM43BA6NCK2 446 aa16.97■□□□□ 0.31
DDX49-207ENST00000598972 DCDC2CA8MYV0 355 aa16.97■□□□□ 0.31
DDX49-207ENST00000598972 EIF3JO75822 258 aaKnown RBP16.97■□□□□ 0.31
DDX49-207ENST00000598972 CLTBP09497 229 aa16.97■□□□□ 0.31
DDX49-207ENST00000598972 CPA1P15085 419 aa16.97■□□□□ 0.31
DDX49-207ENST00000598972 APOA5Q6Q788 366 aa16.97■□□□□ 0.31
DDX49-207ENST00000598972 FCHSD1Q86WN1 690 aa16.97■□□□□ 0.31
DDX49-207ENST00000598972 CCDC82Q8N4S0 544 aa16.97■□□□□ 0.31
DDX49-207ENST00000598972 TRIM43Q96BQ3 446 aaPredicted RBP16.97■□□□□ 0.31
DDX49-207ENST00000598972 JAKMIP1Q96N16 626 aaKnown RBP16.97■□□□□ 0.31
DDX49-207ENST00000598972 BRPF3Q9ULD4 1205 aa16.97■□□□□ 0.31
DDX49-207ENST00000598972 MYH7BA7E2Y1 1941 aa16.96■□□□□ 0.31
DDX49-207ENST00000598972 ZBTB43O43298 467 aa16.96■□□□□ 0.31
DDX49-207ENST00000598972 ARIH2O95376 493 aa16.96■□□□□ 0.31
DDX49-207ENST00000598972 MYCLP12524 364 aaPredicted RBP16.96■□□□□ 0.31
DDX49-207ENST00000598972 FGD1P98174 961 aa16.96■□□□□ 0.31
DDX49-207ENST00000598972 FAAP100Q0VG06 881 aa16.96■□□□□ 0.31
DDX49-207ENST00000598972 CCDC62Q6P9F0 684 aa16.96■□□□□ 0.31
DDX49-207ENST00000598972 BLOC1S2Q6QNY1 142 aa16.96■□□□□ 0.31
DDX49-207ENST00000598972 TMTC3Q6ZXV5 915 aa16.96■□□□□ 0.31
DDX49-207ENST00000598972 PDCD2LQ9BRP1 358 aa16.96■□□□□ 0.31
DDX49-207ENST00000598972 TMEM39AQ9NV64 488 aa16.96■□□□□ 0.31
DDX49-207ENST00000598972 MROH7Q68CQ1 1323 aa16.96■□□□□ 0.3
DDX49-207ENST00000598972 KLF18A0A0U1RQI7 1052 aa16.95■□□□□ 0.3
DDX49-207ENST00000598972 hCG_1642624A0A1W2PR95 340 aa16.95■□□□□ 0.3
DDX49-207ENST00000598972 EPB41L2O43491 1005 aaKnown RBP16.95■□□□□ 0.3
DDX49-207ENST00000598972 SLC34A2O95436 690 aa16.95■□□□□ 0.3
DDX49-207ENST00000598972 MYL3P08590 195 aa16.95■□□□□ 0.3
DDX49-207ENST00000598972 CPT1AP50416 773 aa16.95■□□□□ 0.3
DDX49-207ENST00000598972 ITGA7Q13683 1181 aa16.95■□□□□ 0.3
DDX49-207ENST00000598972 LY6KQ17RY6 165 aa16.95■□□□□ 0.3
DDX49-207ENST00000598972 BRDTQ58F21 947 aaPredicted RBP16.95■□□□□ 0.3
DDX49-207ENST00000598972 Q6ZUG5 572 aa16.95■□□□□ 0.3
DDX49-207ENST00000598972 VSIG10LQ86VR7 867 aa16.95■□□□□ 0.3
DDX49-207ENST00000598972 BADQ92934 168 aa16.95■□□□□ 0.3
DDX49-207ENST00000598972 POLR3EQ9NVU0 708 aa16.95■□□□□ 0.3
DDX49-207ENST00000598972 RBM28Q9NW13 759 aaKnown RBP16.95■□□□□ 0.3
DDX49-207ENST00000598972 LTBP2Q14767 1821 aa16.95■□□□□ 0.3
DDX49-207ENST00000598972 KIAA0355O15063 1070 aa16.94■□□□□ 0.3
DDX49-207ENST00000598972 PSMA5P28066 241 aa16.94■□□□□ 0.3
DDX49-207ENST00000598972 PGM5Q15124 567 aa16.94■□□□□ 0.3
DDX49-207ENST00000598972 RTN1Q16799 776 aa16.94■□□□□ 0.3
DDX49-207ENST00000598972 TDHQ8IZJ6 230 aa16.94■□□□□ 0.3
DDX49-207ENST00000598972 SLC43A3Q8NBI5 491 aa16.94■□□□□ 0.3
DDX49-207ENST00000598972 CUL5Q93034 780 aa16.94■□□□□ 0.3
DDX49-207ENST00000598972 USP26Q9BXU7 913 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms