RNA–Protein interactions for RNA: ENST00000595974.5

TRIM28-206, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-206ENST00000595974 SRBD1Q8N5C6 995 aaKnown RBP18.75■□□□□ 0.59
TRIM28-206ENST00000595974 SCFD2Q8WU76 684 aa18.75■□□□□ 0.59
TRIM28-206ENST00000595974 WDR11Q9BZH6 1224 aa18.75■□□□□ 0.59
TRIM28-206ENST00000595974 STARD7Q9NQZ5 370 aa18.75■□□□□ 0.59
TRIM28-206ENST00000595974 RBM28Q9NW13 759 aaKnown RBP18.75■□□□□ 0.59
TRIM28-206ENST00000595974 ATP11BQ9Y2G3 1177 aa18.75■□□□□ 0.59
TRIM28-206ENST00000595974 NKRFO15226 690 aaKnown RBP eCLIP18.74■□□□□ 0.59
TRIM28-206ENST00000595974 ZBTB43O43298 467 aa18.74■□□□□ 0.59
TRIM28-206ENST00000595974 ASGR1P07306 291 aa18.74■□□□□ 0.59
TRIM28-206ENST00000595974 SYN1P17600 705 aa18.74■□□□□ 0.59
TRIM28-206ENST00000595974 PSMA5P28066 241 aa18.74■□□□□ 0.59
TRIM28-206ENST00000595974 IRX5P78411 483 aaPredicted RBP18.74■□□□□ 0.59
TRIM28-206ENST00000595974 FGD1P98174 961 aa18.74■□□□□ 0.59
TRIM28-206ENST00000595974 PPP2R5BQ15173 497 aa18.74■□□□□ 0.59
TRIM28-206ENST00000595974 TRIM60Q495X7 471 aa18.74■□□□□ 0.59
TRIM28-206ENST00000595974 ARHGEF16Q5VV41 709 aa18.74■□□□□ 0.59
TRIM28-206ENST00000595974 RAB11FIP4Q86YS3 637 aa18.74■□□□□ 0.59
TRIM28-206ENST00000595974 PIBF1Q8WXW3 757 aa18.74■□□□□ 0.59
TRIM28-206ENST00000595974 GLT1D1Q96MS3 346 aa18.74■□□□□ 0.59
TRIM28-206ENST00000595974 PRO3102Q9H379 93 aa18.74■□□□□ 0.59
TRIM28-206ENST00000595974 PXMP2Q9NR77 195 aa18.74■□□□□ 0.59
TRIM28-206ENST00000595974 ELP1O95163 1332 aa18.74■□□□□ 0.59
TRIM28-206ENST00000595974 GCOM1H8Y6P7 765 aaPredicted RBP18.73■□□□□ 0.59
TRIM28-206ENST00000595974 DYNC1LI2O43237 492 aaPredicted RBP18.73■□□□□ 0.59
TRIM28-206ENST00000595974 POLR2MP0CAP2 368 aa18.73■□□□□ 0.59
TRIM28-206ENST00000595974 EIF2AK2P19525 551 aaKnown RBP18.73■□□□□ 0.59
TRIM28-206ENST00000595974 STXBP2Q15833 593 aa18.73■□□□□ 0.59
TRIM28-206ENST00000595974 FSCN1Q16658 493 aaKnown RBP18.73■□□□□ 0.59
TRIM28-206ENST00000595974 HABP4Q5JVS0 413 aaKnown RBP18.73■□□□□ 0.59
TRIM28-206ENST00000595974 BRPF3Q9ULD4 1205 aa18.73■□□□□ 0.59
TRIM28-206ENST00000595974 MYH7BA7E2Y1 1941 aa18.72■□□□□ 0.59
TRIM28-206ENST00000595974 KLF18A0A0U1RQI7 1052 aa18.72■□□□□ 0.59
TRIM28-206ENST00000595974 ZEB2O60315 1214 aa18.72■□□□□ 0.59
TRIM28-206ENST00000595974 RPS6KB1P23443 525 aa18.72■□□□□ 0.59
TRIM28-206ENST00000595974 HOXA13P31271 388 aaPredicted RBP18.72■□□□□ 0.59
TRIM28-206ENST00000595974 BEX3Q00994 111 aa18.72■□□□□ 0.59
TRIM28-206ENST00000595974 TTLL4Q14679 1199 aa18.72■□□□□ 0.59
TRIM28-206ENST00000595974 RTN1Q16799 776 aa18.72■□□□□ 0.59
TRIM28-206ENST00000595974 FBXL16Q8N461 479 aa18.72■□□□□ 0.59
TRIM28-206ENST00000595974 GDF15Q99988 308 aa18.72■□□□□ 0.59
TRIM28-206ENST00000595974 USP26Q9BXU7 913 aa18.72■□□□□ 0.59
TRIM28-206ENST00000595974 PRKAG2Q9UGJ0 569 aa18.72■□□□□ 0.59
TRIM28-206ENST00000595974 CNTNAP5Q8WYK1 1306 aa18.72■□□□□ 0.59
TRIM28-206ENST00000595974 SCN10AQ9Y5Y9 1956 aa18.72■□□□□ 0.59
TRIM28-206ENST00000595974 A0A1W2PPC1 479 aa18.71■□□□□ 0.59
TRIM28-206ENST00000595974 GOLGA8AA7E2F4 631 aa18.71■□□□□ 0.59
TRIM28-206ENST00000595974 GOLGA8BA8MQT2 603 aa18.71■□□□□ 0.59
TRIM28-206ENST00000595974 CABYRO75952 493 aa18.71■□□□□ 0.59
TRIM28-206ENST00000595974 NR3C2P08235 984 aa18.71■□□□□ 0.59
TRIM28-206ENST00000595974 CPA1P15085 419 aa18.71■□□□□ 0.59
TRIM28-206ENST00000595974 CASTP20810 708 aaKnown RBP18.71■□□□□ 0.59
TRIM28-206ENST00000595974 PTGS1P23219 599 aa18.71■□□□□ 0.59
TRIM28-206ENST00000595974 TMEM63BQ5T3F8 832 aa18.71■□□□□ 0.59
TRIM28-206ENST00000595974 Q6ZUG5 572 aa18.71■□□□□ 0.59
TRIM28-206ENST00000595974 CMTR1Q8N1G2 835 aaKnown RBP18.71■□□□□ 0.59
TRIM28-206ENST00000595974 PDCD2LQ9BRP1 358 aa18.71■□□□□ 0.59
TRIM28-206ENST00000595974 RBM27Q9P2N5 1060 aaKnown RBP18.71■□□□□ 0.59
TRIM28-206ENST00000595974 MROH7Q68CQ1 1323 aa18.71■□□□□ 0.59
TRIM28-206ENST00000595974 NID2Q14112 1375 aa18.7■□□□□ 0.58
TRIM28-206ENST00000595974 A0A0U1RQG5 324 aaPredicted RBP18.7■□□□□ 0.58
TRIM28-206ENST00000595974 EIF3JO75822 258 aaKnown RBP18.7■□□□□ 0.58
TRIM28-206ENST00000595974 TXNP10599 105 aaKnown RBP18.7■□□□□ 0.58
TRIM28-206ENST00000595974 BMP8BP34820 402 aa18.7■□□□□ 0.58
TRIM28-206ENST00000595974 MAGEA10P43363 369 aaPredicted RBP18.7■□□□□ 0.58
TRIM28-206ENST00000595974 CPT1AP50416 773 aa18.7■□□□□ 0.58
TRIM28-206ENST00000595974 TLE2Q04725 743 aa18.7■□□□□ 0.58
TRIM28-206ENST00000595974 ANKRD33Q7Z3H0 272 aa18.7■□□□□ 0.58
TRIM28-206ENST00000595974 OR6J1Q8NGC5 347 aa18.7■□□□□ 0.58
TRIM28-206ENST00000595974 BRF1Q92994 677 aa18.7■□□□□ 0.58
TRIM28-206ENST00000595974 TOX2Q96NM4 488 aa18.7■□□□□ 0.58
TRIM28-206ENST00000595974 AGXT2Q9BYV1 514 aa18.7■□□□□ 0.58
TRIM28-206ENST00000595974 PDLIM7Q9NR12 457 aa18.7■□□□□ 0.58
TRIM28-206ENST00000595974 FRMPD4Q14CM0 1322 aa18.7■□□□□ 0.58
TRIM28-206ENST00000595974 PGM5Q15124 567 aa18.69■□□□□ 0.58
TRIM28-206ENST00000595974 BRDTQ58F21 947 aaPredicted RBP18.69■□□□□ 0.58
TRIM28-206ENST00000595974 CCDC62Q6P9F0 684 aa18.69■□□□□ 0.58
TRIM28-206ENST00000595974 CXCL17Q6UXB2 119 aa18.69■□□□□ 0.58
TRIM28-206ENST00000595974 FCHSD1Q86WN1 690 aa18.69■□□□□ 0.58
TRIM28-206ENST00000595974 CCDC82Q8N4S0 544 aa18.69■□□□□ 0.58
TRIM28-206ENST00000595974 CUL5Q93034 780 aa18.69■□□□□ 0.58
TRIM28-206ENST00000595974 POLR3EQ9NVU0 708 aa18.69■□□□□ 0.58
TRIM28-206ENST00000595974 CCDC196A0A1B0GTZ2 297 aa18.68■□□□□ 0.58
TRIM28-206ENST00000595974 DCDC2CA8MYV0 355 aa18.68■□□□□ 0.58
TRIM28-206ENST00000595974 PIK3CDO00329 1044 aa18.68■□□□□ 0.58
TRIM28-206ENST00000595974 PQBP1O60828 265 aaKnown RBP18.68■□□□□ 0.58
TRIM28-206ENST00000595974 ARIH2O95376 493 aa18.68■□□□□ 0.58
TRIM28-206ENST00000595974 CLTBP09497 229 aa18.68■□□□□ 0.58
TRIM28-206ENST00000595974 CCND2P30279 289 aa18.68■□□□□ 0.58
TRIM28-206ENST00000595974 METAP2P50579 478 aaKnown RBP eCLIP18.68■□□□□ 0.588e-9■□□□□ 9.5
TRIM28-206ENST00000595974 APOBRQ0VD83 1088 aa18.68■□□□□ 0.58
TRIM28-206ENST00000595974 FUT2Q10981 343 aa18.68■□□□□ 0.58
TRIM28-206ENST00000595974 SEPT14Q6ZU15 432 aa18.68■□□□□ 0.58
TRIM28-206ENST00000595974 VTI1AQ96AJ9 217 aa18.68■□□□□ 0.58
TRIM28-206ENST00000595974 LBHD1Q9BQE6 289 aaPredicted RBP18.68■□□□□ 0.58
TRIM28-206ENST00000595974 SEZ6LQ9BYH1 1024 aa18.68■□□□□ 0.58
TRIM28-206ENST00000595974 TM6SF1Q9BZW5 370 aa18.68■□□□□ 0.58
TRIM28-206ENST00000595974 PRDM5Q9NQX1 630 aaPredicted RBP18.68■□□□□ 0.58
TRIM28-206ENST00000595974 NAP1L2Q9ULW6 460 aaPredicted RBP18.68■□□□□ 0.58
TRIM28-206ENST00000595974 hCG_1642624A0A1W2PR95 340 aa18.67■□□□□ 0.58
TRIM28-206ENST00000595974 hCG_1984214I3L0E3 225 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms