RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 LMNTD2Q8IXW0 634 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 FBXL16Q8N461 479 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 ZBTB9Q96C00 473 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 NRDE2Q9H7Z3 1164 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 ABCB6Q9NP58 842 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 ANO2Q9NQ90 1003 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 TRMT1Q9NXH9 659 aaKnown RBP4.85□□□□□ -1.63
LRIT3-202ENST00000594814 PCDH10Q9P2E7 1040 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 NOSIPQ9Y314 301 aaKnown RBP4.85□□□□□ -1.63
LRIT3-202ENST00000594814 GRIN2DO15399 1336 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 A6NHS1 94 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 STXBP3O00186 592 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 IPO5O00410 1097 aaKnown RBP4.85□□□□□ -1.63
LRIT3-202ENST00000594814 BIRC5O15392 142 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 BAG3O95817 575 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 IGHA2P01877 340 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 CHGBP05060 677 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 CCND1P24385 295 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 HOXA7P31268 230 aaPredicted RBP4.85□□□□□ -1.63
LRIT3-202ENST00000594814 PAPOLAP51003 745 aaKnown RBP4.85□□□□□ -1.63
LRIT3-202ENST00000594814 WASHC5Q12768 1159 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 RESTQ13127 1097 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 CUL3Q13618 768 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 LRRC23Q53EV4 343 aaPredicted RBP4.85□□□□□ -1.63
LRIT3-202ENST00000594814 CYB5D1Q6P9G0 228 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 C3orf67Q6ZVT6 689 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 RASGRP2Q7LDG7 609 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 TRIM74Q86UV6 250 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 TRIM73Q86UV7 250 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 MTMR14Q8NCE2 650 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 MRPS27Q92552 414 aaKnown RBP4.85□□□□□ -1.63
LRIT3-202ENST00000594814 GLMNQ92990 594 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 LSG1Q9H089 658 aaKnown RBP4.85□□□□□ -1.63
LRIT3-202ENST00000594814 SLC40A1Q9NP59 571 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 KMT5AQ9NQR1 393 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 DDX21Q9NR30 783 aaKnown RBP eCLIP4.85□□□□□ -1.63
LRIT3-202ENST00000594814 TUBA8Q9NY65 449 aaPredicted RBP4.85□□□□□ -1.63
LRIT3-202ENST00000594814 KIAA1468Q9P260 1216 aa4.85□□□□□ -1.63
LRIT3-202ENST00000594814 PA2G4Q9UQ80 394 aaKnown RBP4.85□□□□□ -1.63
LRIT3-202ENST00000594814 ZNF330Q9Y3S2 320 aaPredicted RBP4.85□□□□□ -1.63
LRIT3-202ENST00000594814 NDUFAB1O14561 156 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 CCT5P48643 541 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 EPHB4P54760 987 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 IGBP1P78318 339 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 CLDN10P78369 228 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 FANCCQ00597 558 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 MORC3Q14149 939 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 KRT72Q14CN4 511 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 LCA5Q86VQ0 697 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 TMTC1Q8IUR5 882 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 TMEM139Q8IV31 216 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 CNGA4Q8IV77 575 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 IGSF22Q8N9C0 903 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 LMBR1Q8WVP7 490 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 CENPTQ96BT3 561 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 SUCLG2Q96I99 432 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 ZCCHC17Q9NP64 241 aaKnown RBP4.84□□□□□ -1.63
LRIT3-202ENST00000594814 UTP6Q9NYH9 597 aaKnown RBP4.84□□□□□ -1.63
LRIT3-202ENST00000594814 DBF4Q9UBU7 674 aaPredicted RBP4.84□□□□□ -1.63
LRIT3-202ENST00000594814 SFMBT1Q9UHJ3 866 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 TUBE1Q9UJT0 475 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 GJD2Q9UKL4 321 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 TRPC6Q9Y210 931 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 C15orf41Q9Y2V0 281 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 LOC102724428A0A0B4J2F2 783 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 RASSF10A6NK89 507 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 FAM25EA8MYX2 175 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 PSMD14O00487 310 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 CCDC166P0CW27 439 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 RXRBP28702 533 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 CASP14P31944 242 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 CCNHP51946 323 aaPredicted RBP4.84□□□□□ -1.63
LRIT3-202ENST00000594814 SIK1P57059 783 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 ITIH4Q14624 930 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 PRPF38BQ5VTL8 546 aaKnown RBP4.84□□□□□ -1.63
LRIT3-202ENST00000594814 CCDC174Q6PII3 467 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 LVRNQ6Q4G3 990 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 MMGT1Q8N4V1 131 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 GIMAP8Q8ND71 665 aaPredicted RBP4.84□□□□□ -1.63
LRIT3-202ENST00000594814 PHC3Q8NDX5 983 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 C17orf50Q8WW18 174 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 CUL5Q93034 780 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 SMC6Q96SB8 1091 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 MYD88Q99836 296 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 HAUS7Q99871 368 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 TANGO6Q9C0B7 1094 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 XPO4Q9C0E2 1151 aaKnown RBP4.84□□□□□ -1.63
LRIT3-202ENST00000594814 RTEL1Q9NZ71 1219 aa4.84□□□□□ -1.63
LRIT3-202ENST00000594814 SBF2Q86WG5 1849 aa4.84□□□□□ -1.64
LRIT3-202ENST00000594814 BIN1O00499 593 aa4.84□□□□□ -1.64
LRIT3-202ENST00000594814 GNAI2P04899 355 aa4.84□□□□□ -1.64
LRIT3-202ENST00000594814 CRKLP46109 303 aaKnown RBP4.84□□□□□ -1.64
LRIT3-202ENST00000594814 BIRC3Q13489 604 aa4.84□□□□□ -1.64
LRIT3-202ENST00000594814 LAMB3Q13751 1172 aa4.84□□□□□ -1.64
LRIT3-202ENST00000594814 SPECC1LQ69YQ0 1117 aa4.84□□□□□ -1.64
LRIT3-202ENST00000594814 OTUD6AQ7L8S5 288 aa4.84□□□□□ -1.64
LRIT3-202ENST00000594814 BRSK2Q8IWQ3 736 aa4.84□□□□□ -1.64
LRIT3-202ENST00000594814 CCDC13Q8IYE1 715 aa4.84□□□□□ -1.64
LRIT3-202ENST00000594814 FUKQ8N0W3 1084 aa4.84□□□□□ -1.64
LRIT3-202ENST00000594814 CCDC12Q8WUD4 166 aaPredicted RBP4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms