RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 REC8O95072 547 aa21.42■■□□□ 1.02
SHKBP1-202ENST00000593764 BMP8BP34820 402 aa21.42■■□□□ 1.02
SHKBP1-202ENST00000593764 GNAQP50148 359 aa21.42■■□□□ 1.02
SHKBP1-202ENST00000593764 MRPL12P52815 198 aaKnown RBP21.42■■□□□ 1.02
SHKBP1-202ENST00000593764 TLE2Q04725 743 aa21.42■■□□□ 1.02
SHKBP1-202ENST00000593764 TRAF1Q13077 416 aa21.42■■□□□ 1.02
SHKBP1-202ENST00000593764 CMTR1Q8N1G2 835 aaKnown RBP21.42■■□□□ 1.02
SHKBP1-202ENST00000593764 SAMD3Q8N6K7 520 aa21.42■■□□□ 1.02
SHKBP1-202ENST00000593764 IWS1Q96ST2 819 aa21.42■■□□□ 1.02
SHKBP1-202ENST00000593764 AP5M1Q9H0R1 490 aa21.42■■□□□ 1.02
SHKBP1-202ENST00000593764 STARD7Q9NQZ5 370 aa21.42■■□□□ 1.02
SHKBP1-202ENST00000593764 BRPF3Q9ULD4 1205 aa21.42■■□□□ 1.02
SHKBP1-202ENST00000593764 ELP1O95163 1332 aa21.41■■□□□ 1.02
SHKBP1-202ENST00000593764 HMGB1P09429 215 aaKnown RBP21.41■■□□□ 1.02
SHKBP1-202ENST00000593764 CPA1P15085 419 aa21.41■■□□□ 1.02
SHKBP1-202ENST00000593764 HOXA13P31271 388 aaPredicted RBP21.41■■□□□ 1.02
SHKBP1-202ENST00000593764 FSCN1Q16658 493 aaKnown RBP21.41■■□□□ 1.02
SHKBP1-202ENST00000593764 APOA5Q6Q788 366 aa21.41■■□□□ 1.02
SHKBP1-202ENST00000593764 RRP36Q96EU6 259 aaKnown RBP21.41■■□□□ 1.02
SHKBP1-202ENST00000593764 PXMP2Q9NR77 195 aa21.41■■□□□ 1.02
SHKBP1-202ENST00000593764 CDK7P50613 346 aa21.4■■□□□ 1.02
SHKBP1-202ENST00000593764 ARHGEF16Q5VV41 709 aa21.4■■□□□ 1.02
SHKBP1-202ENST00000593764 SH3RF1Q7Z6J0 888 aa21.4■■□□□ 1.02
SHKBP1-202ENST00000593764 MICU3Q86XE3 530 aa21.4■■□□□ 1.02
SHKBP1-202ENST00000593764 SCFD2Q8WU76 684 aa21.4■■□□□ 1.02
SHKBP1-202ENST00000593764 GLT1D1Q96MS3 346 aa21.4■■□□□ 1.02
SHKBP1-202ENST00000593764 PDLIM7Q9NR12 457 aa21.4■■□□□ 1.02
SHKBP1-202ENST00000593764 TRIM43BA6NCK2 446 aa21.39■■□□□ 1.01
SHKBP1-202ENST00000593764 NR3C2P08235 984 aa21.39■■□□□ 1.01
SHKBP1-202ENST00000593764 EIF2AK2P19525 551 aaKnown RBP21.39■■□□□ 1.01
SHKBP1-202ENST00000593764 FXR1P51114 621 aaKnown RBP eCLIP21.39■■□□□ 1.01
SHKBP1-202ENST00000593764 STXBP2Q15833 593 aa21.39■■□□□ 1.01
SHKBP1-202ENST00000593764 CCDC62Q6P9F0 684 aa21.39■■□□□ 1.01
SHKBP1-202ENST00000593764 TMTC3Q6ZXV5 915 aa21.39■■□□□ 1.01
SHKBP1-202ENST00000593764 ANKRD33Q7Z3H0 272 aa21.39■■□□□ 1.01
SHKBP1-202ENST00000593764 TRIM43Q96BQ3 446 aaPredicted RBP21.39■■□□□ 1.01
SHKBP1-202ENST00000593764 JAKMIP1Q96N16 626 aaKnown RBP21.39■■□□□ 1.01
SHKBP1-202ENST00000593764 SZT2Q5T011 3432 aa21.39■■□□□ 1.01
SHKBP1-202ENST00000593764 GCOM1H8Y6P7 765 aaPredicted RBP21.38■■□□□ 1.01
SHKBP1-202ENST00000593764 EPB41L2O43491 1005 aaKnown RBP21.38■■□□□ 1.01
SHKBP1-202ENST00000593764 ARIH2O95376 493 aa21.38■■□□□ 1.01
SHKBP1-202ENST00000593764 POLR2MP0CAP2 368 aa21.38■■□□□ 1.01
SHKBP1-202ENST00000593764 MDM2Q00987 491 aaPredicted RBP21.38■■□□□ 1.01
SHKBP1-202ENST00000593764 CXCL17Q6UXB2 119 aa21.38■■□□□ 1.01
SHKBP1-202ENST00000593764 SYNE3Q6ZMZ3 975 aa21.38■■□□□ 1.01
SHKBP1-202ENST00000593764 CCDC82Q8N4S0 544 aa21.38■■□□□ 1.01
SHKBP1-202ENST00000593764 COPS5Q92905 334 aa21.38■■□□□ 1.01
SHKBP1-202ENST00000593764 TOX2Q96NM4 488 aa21.38■■□□□ 1.01
SHKBP1-202ENST00000593764 PDCD2LQ9BRP1 358 aa21.38■■□□□ 1.01
SHKBP1-202ENST00000593764 USP26Q9BXU7 913 aa21.38■■□□□ 1.01
SHKBP1-202ENST00000593764 A0A1W2PPC1 479 aa21.37■■□□□ 1.01
SHKBP1-202ENST00000593764 NKRFO15226 690 aaKnown RBP eCLIP21.37■■□□□ 1.01
SHKBP1-202ENST00000593764 PQBP1O60828 265 aaKnown RBP21.37■■□□□ 1.01
SHKBP1-202ENST00000593764 EIF3JO75822 258 aaKnown RBP21.37■■□□□ 1.01
SHKBP1-202ENST00000593764 TXNP10599 105 aaKnown RBP21.37■■□□□ 1.01
SHKBP1-202ENST00000593764 FAAP100Q0VG06 881 aa21.37■■□□□ 1.01
SHKBP1-202ENST00000593764 PPP2R5BQ15173 497 aa21.37■■□□□ 1.01
SHKBP1-202ENST00000593764 SEPT14Q6ZU15 432 aa21.37■■□□□ 1.01
SHKBP1-202ENST00000593764 VTI1AQ96AJ9 217 aa21.37■■□□□ 1.01
SHKBP1-202ENST00000593764 FAM217BQ9NTX9 383 aaPredicted RBP21.37■■□□□ 1.01
SHKBP1-202ENST00000593764 PRKAG2Q9UGJ0 569 aa21.37■■□□□ 1.01
SHKBP1-202ENST00000593764 SEC63Q9UGP8 760 aaKnown RBP21.37■■□□□ 1.01
SHKBP1-202ENST00000593764 GRIN2DO15399 1336 aa21.36■■□□□ 1.01
SHKBP1-202ENST00000593764 A0A0U1RQG5 324 aaPredicted RBP21.36■■□□□ 1.01
SHKBP1-202ENST00000593764 hCG_1642624A0A1W2PR95 340 aa21.36■■□□□ 1.01
SHKBP1-202ENST00000593764 ARVCFO00192 962 aa21.36■■□□□ 1.01
SHKBP1-202ENST00000593764 ZBTB43O43298 467 aa21.36■■□□□ 1.01
SHKBP1-202ENST00000593764 ZEB2O60315 1214 aa21.36■■□□□ 1.01
SHKBP1-202ENST00000593764 FUT2Q10981 343 aa21.36■■□□□ 1.01
SHKBP1-202ENST00000593764 TTLL4Q14679 1199 aa21.36■■□□□ 1.01
SHKBP1-202ENST00000593764 PGM5Q15124 567 aa21.36■■□□□ 1.01
SHKBP1-202ENST00000593764 FCHSD1Q86WN1 690 aa21.36■■□□□ 1.01
SHKBP1-202ENST00000593764 SLC43A3Q8NBI5 491 aa21.36■■□□□ 1.01
SHKBP1-202ENST00000593764 OR6J1Q8NGC5 347 aa21.36■■□□□ 1.01
SHKBP1-202ENST00000593764 IL31RAQ8NI17 732 aa21.36■■□□□ 1.01
SHKBP1-202ENST00000593764 PRDM5Q9NQX1 630 aaPredicted RBP21.36■■□□□ 1.01
SHKBP1-202ENST00000593764 LAMA2P24043 3122 aaKnown RBP21.35■■□□□ 1.01
SHKBP1-202ENST00000593764 KLF18A0A0U1RQI7 1052 aa21.35■■□□□ 1.01
SHKBP1-202ENST00000593764 CABYRO75952 493 aa21.35■■□□□ 1.01
SHKBP1-202ENST00000593764 RGS20O76081 388 aa21.35■■□□□ 1.01
SHKBP1-202ENST00000593764 CLTBP09497 229 aa21.35■■□□□ 1.01
SHKBP1-202ENST00000593764 RPS6KB1P23443 525 aa21.35■■□□□ 1.01
SHKBP1-202ENST00000593764 ITGB8P26012 769 aa21.35■■□□□ 1.01
SHKBP1-202ENST00000593764 LY6KQ17RY6 165 aa21.35■■□□□ 1.01
SHKBP1-202ENST00000593764 BLOC1S2Q6QNY1 142 aa21.35■■□□□ 1.01
SHKBP1-202ENST00000593764 Q6ZUG5 572 aa21.35■■□□□ 1.01
SHKBP1-202ENST00000593764 VSIG10LQ86VR7 867 aa21.35■■□□□ 1.01
SHKBP1-202ENST00000593764 FBXL16Q8N461 479 aa21.35■■□□□ 1.01
SHKBP1-202ENST00000593764 RBM28Q9NW13 759 aaKnown RBP21.35■■□□□ 1.01
SHKBP1-202ENST00000593764 KIAA1217Q5T5P2 1943 aa21.34■■□□□ 1.01
SHKBP1-202ENST00000593764 A6NJR5 290 aa21.34■■□□□ 1.01
SHKBP1-202ENST00000593764 DCDC2CA8MYV0 355 aa21.34■■□□□ 1.01
SHKBP1-202ENST00000593764 MEIS2O14770 477 aa21.34■■□□□ 1.01
SHKBP1-202ENST00000593764 KIAA0355O15063 1070 aa21.34■■□□□ 1.01
SHKBP1-202ENST00000593764 SLC34A2O95436 690 aa21.34■■□□□ 1.01
SHKBP1-202ENST00000593764 CDC27P30260 824 aa21.34■■□□□ 1.01
SHKBP1-202ENST00000593764 RCAN1P53805 252 aa21.34■■□□□ 1.01
SHKBP1-202ENST00000593764 RTN1Q16799 776 aa21.34■■□□□ 1.01
SHKBP1-202ENST00000593764 LBHD1Q9BQE6 289 aaPredicted RBP21.34■■□□□ 1.01
SHKBP1-202ENST00000593764 AGXT2Q9BYV1 514 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms