RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 C17orf99Q6UX52 265 aa6.91□□□□□ -1.3
DNMT1-220ENST00000589351 MIGA2Q7L4E1 593 aa6.91□□□□□ -1.3
DNMT1-220ENST00000589351 FASTKD5Q7L8L6 764 aaKnown RBP6.91□□□□□ -1.3
DNMT1-220ENST00000589351 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.91□□□□□ -1.3
DNMT1-220ENST00000589351 UTP4Q969X6 686 aaKnown RBP6.91□□□□□ -1.3
DNMT1-220ENST00000589351 SUCLG2Q96I99 432 aa6.91□□□□□ -1.3
DNMT1-220ENST00000589351 PARK7Q99497 189 aaKnown RBP6.91□□□□□ -1.3
DNMT1-220ENST00000589351 DBNDD2Q9BQY9 259 aa6.91□□□□□ -1.3
DNMT1-220ENST00000589351 RNF208Q9H0X6 261 aa6.91□□□□□ -1.3
DNMT1-220ENST00000589351 BICC1Q9H694 974 aaKnown RBP6.91□□□□□ -1.3
DNMT1-220ENST00000589351 KCNK4Q9NYG8 393 aa6.91□□□□□ -1.3
DNMT1-220ENST00000589351 AOX1Q06278 1338 aa6.91□□□□□ -1.3
DNMT1-220ENST00000589351 CXCL11O14625 94 aa6.9□□□□□ -1.3
DNMT1-220ENST00000589351 XYLBO75191 536 aa6.9□□□□□ -1.3
DNMT1-220ENST00000589351 LDHBP07195 334 aaKnown RBP6.9□□□□□ -1.3
DNMT1-220ENST00000589351 PSAPP07602 524 aa6.9□□□□□ -1.3
DNMT1-220ENST00000589351 GJB1P08034 283 aa6.9□□□□□ -1.3
DNMT1-220ENST00000589351 IGFBP4P22692 258 aa6.9□□□□□ -1.3
DNMT1-220ENST00000589351 GJA8P48165 433 aa6.9□□□□□ -1.3
DNMT1-220ENST00000589351 RABL6Q3YEC7 729 aaPredicted RBP6.9□□□□□ -1.3
DNMT1-220ENST00000589351 LRRC24Q50LG9 513 aa6.9□□□□□ -1.3
DNMT1-220ENST00000589351 APOBEC3HQ6NTF7 200 aaKnown RBP6.9□□□□□ -1.3
DNMT1-220ENST00000589351 ZGPATQ8N5A5 531 aaKnown RBP6.9□□□□□ -1.3
DNMT1-220ENST00000589351 LPIN2Q92539 896 aa6.9□□□□□ -1.3
DNMT1-220ENST00000589351 FAM46AQ96IP4 442 aaKnown RBP6.9□□□□□ -1.3
DNMT1-220ENST00000589351 KRTAP4-2Q9BYR5 136 aa6.9□□□□□ -1.3
DNMT1-220ENST00000589351 CEP41Q9BYV8 373 aa6.9□□□□□ -1.3
DNMT1-220ENST00000589351 CWC22Q9HCG8 908 aaKnown RBP6.9□□□□□ -1.3
DNMT1-220ENST00000589351 PICK1Q9NRD5 415 aa6.9□□□□□ -1.3
DNMT1-220ENST00000589351 CPA4Q9UI42 421 aa6.9□□□□□ -1.3
DNMT1-220ENST00000589351 PPME1Q9Y570 386 aa6.9□□□□□ -1.3
DNMT1-220ENST00000589351 UTYO14607 1347 aa6.9□□□□□ -1.3
DNMT1-220ENST00000589351 MYPNQ86TC9 1320 aa6.9□□□□□ -1.3
DNMT1-220ENST00000589351 KIF16BQ96L93 1317 aa6.9□□□□□ -1.3
DNMT1-220ENST00000589351 KIAA0100Q14667 2235 aaKnown RBP6.9□□□□□ -1.3
DNMT1-220ENST00000589351 LINC01387J3KSC0 135 aa6.89□□□□□ -1.31
DNMT1-220ENST00000589351 TFRCP02786 760 aaKnown RBP6.89□□□□□ -1.31
DNMT1-220ENST00000589351 CCL5P13501 91 aa6.89□□□□□ -1.31
DNMT1-220ENST00000589351 KCNA1Q09470 495 aa6.89□□□□□ -1.31
DNMT1-220ENST00000589351 TCP10Q12799 353 aa6.89□□□□□ -1.31
DNMT1-220ENST00000589351 CCDC184Q52MB2 194 aa6.89□□□□□ -1.31
DNMT1-220ENST00000589351 ACAD11Q709F0 780 aa6.89□□□□□ -1.31
DNMT1-220ENST00000589351 ZSCAN29Q8IWY8 852 aaPredicted RBP6.89□□□□□ -1.31
DNMT1-220ENST00000589351 CMTR1Q8N1G2 835 aaKnown RBP6.89□□□□□ -1.31
DNMT1-220ENST00000589351 SHKBP1Q8TBC3 707 aa6.89□□□□□ -1.31
DNMT1-220ENST00000589351 COA7Q96BR5 231 aa6.89□□□□□ -1.31
DNMT1-220ENST00000589351 ARHGAP39Q9C0H5 1083 aa6.89□□□□□ -1.31
DNMT1-220ENST00000589351 MUC3BQ9H195 1237 aa6.89□□□□□ -1.31
DNMT1-220ENST00000589351 USP40Q9NVE5 1235 aa6.89□□□□□ -1.31
DNMT1-220ENST00000589351 ZNF112Q9UJU3 913 aa6.89□□□□□ -1.31
DNMT1-220ENST00000589351 DENND2AQ9ULE3 1009 aa6.89□□□□□ -1.31
DNMT1-220ENST00000589351 LRRFIP2Q9Y608 721 aaKnown RBP6.89□□□□□ -1.31
DNMT1-220ENST00000589351 PTPRCP08575 1304 aa6.89□□□□□ -1.31
DNMT1-220ENST00000589351 RPAP1Q9BWH6 1393 aaPredicted RBP6.89□□□□□ -1.31
DNMT1-220ENST00000589351 AK9Q5TCS8 1911 aa6.89□□□□□ -1.31
DNMT1-220ENST00000589351 OTOFQ9HC10 1997 aa6.88□□□□□ -1.31
DNMT1-220ENST00000589351 A0A1B0GUL6 1792 aa6.88□□□□□ -1.31
DNMT1-220ENST00000589351 ARAP2Q8WZ64 1704 aa6.88□□□□□ -1.31
DNMT1-220ENST00000589351 A0A1W2PPC1 479 aa6.88□□□□□ -1.31
DNMT1-220ENST00000589351 EYA2O00167 538 aa6.88□□□□□ -1.31
DNMT1-220ENST00000589351 TM4SF5O14894 197 aa6.88□□□□□ -1.31
DNMT1-220ENST00000589351 ENTPD3O75355 529 aa6.88□□□□□ -1.31
DNMT1-220ENST00000589351 SGPL1O95470 568 aa6.88□□□□□ -1.31
DNMT1-220ENST00000589351 CD68P34810 354 aaPredicted RBP6.88□□□□□ -1.31
DNMT1-220ENST00000589351 CAP1Q01518 475 aa6.88□□□□□ -1.31
DNMT1-220ENST00000589351 PABPC4Q13310 644 aaKnown RBP eCLIP6.88□□□□□ -1.31
DNMT1-220ENST00000589351 UVSSAQ2YD98 709 aa6.88□□□□□ -1.31
DNMT1-220ENST00000589351 C11orf91Q3C1V1 193 aa6.88□□□□□ -1.31
DNMT1-220ENST00000589351 NOL9Q5SY16 702 aaKnown RBP6.88□□□□□ -1.31
DNMT1-220ENST00000589351 SPTY2D1Q68D10 685 aaPredicted RBP6.88□□□□□ -1.31
DNMT1-220ENST00000589351 OGFOD2Q6N063 350 aa6.88□□□□□ -1.31
DNMT1-220ENST00000589351 CDC42EP5Q6NZY7 148 aa6.88□□□□□ -1.31
DNMT1-220ENST00000589351 TXNDC11Q6PKC3 985 aa6.88□□□□□ -1.31
DNMT1-220ENST00000589351 GADL1Q6ZQY3 521 aa6.88□□□□□ -1.31
DNMT1-220ENST00000589351 ABI1Q8IZP0 508 aa6.88□□□□□ -1.31
DNMT1-220ENST00000589351 SMCR8Q8TEV9 937 aaPredicted RBP6.88□□□□□ -1.31
DNMT1-220ENST00000589351 U2AF1L4Q8WU68 220 aaKnown RBP6.88□□□□□ -1.31
DNMT1-220ENST00000589351 KAZALD1Q96I82 304 aa6.88□□□□□ -1.31
DNMT1-220ENST00000589351 MYRFLQ96LU7 910 aa6.88□□□□□ -1.31
DNMT1-220ENST00000589351 RBSNQ9H1K0 784 aa6.88□□□□□ -1.31
DNMT1-220ENST00000589351 SLC45A1Q9Y2W3 748 aa6.88□□□□□ -1.31
DNMT1-220ENST00000589351 ZHX2Q9Y6X8 837 aa6.88□□□□□ -1.31
DNMT1-220ENST00000589351 TNPO2O14787 897 aaKnown RBP6.87□□□□□ -1.31
DNMT1-220ENST00000589351 ADCY3O60266 1144 aa6.87□□□□□ -1.31
DNMT1-220ENST00000589351 FARP2O94887 1054 aaPredicted RBP6.87□□□□□ -1.31
DNMT1-220ENST00000589351 HOXD8P13378 290 aaPredicted RBP6.87□□□□□ -1.31
DNMT1-220ENST00000589351 FGFR2P21802 821 aa6.87□□□□□ -1.31
DNMT1-220ENST00000589351 ATP2B3Q16720 1220 aa6.87□□□□□ -1.31
DNMT1-220ENST00000589351 KIAA1211Q6ZU35 1233 aa6.87□□□□□ -1.31
DNMT1-220ENST00000589351 SCYL3Q8IZE3 742 aa6.87□□□□□ -1.31
DNMT1-220ENST00000589351 RGL4Q8IZJ4 473 aa6.87□□□□□ -1.31
DNMT1-220ENST00000589351 FAM9BQ8IZU0 186 aa6.87□□□□□ -1.31
DNMT1-220ENST00000589351 VGLL2Q8N8G2 317 aa6.87□□□□□ -1.31
DNMT1-220ENST00000589351 SLC17A8Q8NDX2 589 aa6.87□□□□□ -1.31
DNMT1-220ENST00000589351 USP44Q9H0E7 712 aa6.87□□□□□ -1.31
DNMT1-220ENST00000589351 DAGLAQ9Y4D2 1042 aa6.87□□□□□ -1.31
DNMT1-220ENST00000589351 CENPFP49454 3210 aa6.86□□□□□ -1.31
DNMT1-220ENST00000589351 SALL1Q9NSC2 1324 aa6.86□□□□□ -1.31
DNMT1-220ENST00000589351 A0A0G2JLL6 359 aaPredicted RBP6.86□□□□□ -1.31
DNMT1-220ENST00000589351 CTNND1O60716 968 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms