RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 TRIM43BA6NCK2 446 aa15.26■□□□□ 0.03
ERBB2-220ENST00000584684 DCDC2CA8MYV0 355 aa15.26■□□□□ 0.03
ERBB2-220ENST00000584684 ARVCFO00192 962 aa15.26■□□□□ 0.03
ERBB2-220ENST00000584684 PQBP1O60828 265 aaKnown RBP15.26■□□□□ 0.03
ERBB2-220ENST00000584684 CALM1P0DP23 149 aa15.26■□□□□ 0.03
ERBB2-220ENST00000584684 CALM2P0DP24 149 aa15.26■□□□□ 0.03
ERBB2-220ENST00000584684 CALM3P0DP25 149 aa15.26■□□□□ 0.03
ERBB2-220ENST00000584684 BEX3Q00994 111 aa15.26■□□□□ 0.03
ERBB2-220ENST00000584684 COL9A3Q14050 684 aaPredicted RBP15.26■□□□□ 0.03
ERBB2-220ENST00000584684 TBC1D5Q92609 795 aa15.26■□□□□ 0.03
ERBB2-220ENST00000584684 TRIM43Q96BQ3 446 aaPredicted RBP15.26■□□□□ 0.03
ERBB2-220ENST00000584684 PIGSQ96S52 555 aa15.26■□□□□ 0.03
ERBB2-220ENST00000584684 RMDN3Q96TC7 470 aa15.26■□□□□ 0.03
ERBB2-220ENST00000584684 PRDM5Q9NQX1 630 aaPredicted RBP15.26■□□□□ 0.03
ERBB2-220ENST00000584684 GPHNQ9NQX3 736 aaPredicted RBP15.26■□□□□ 0.03
ERBB2-220ENST00000584684 TBX21Q9UL17 535 aa15.26■□□□□ 0.03
ERBB2-220ENST00000584684 CCDC69A6NI79 296 aa15.25■□□□□ 0.03
ERBB2-220ENST00000584684 DYNC1LI2O43237 492 aaPredicted RBP15.25■□□□□ 0.03
ERBB2-220ENST00000584684 GNAQP50148 359 aa15.25■□□□□ 0.03
ERBB2-220ENST00000584684 CPT1AP50416 773 aa15.25■□□□□ 0.03
ERBB2-220ENST00000584684 FAAP100Q0VG06 881 aa15.25■□□□□ 0.03
ERBB2-220ENST00000584684 KRT32Q14532 448 aa15.25■□□□□ 0.03
ERBB2-220ENST00000584684 TMEM63BQ5T3F8 832 aa15.25■□□□□ 0.03
ERBB2-220ENST00000584684 GPR153Q6NV75 609 aa15.25■□□□□ 0.03
ERBB2-220ENST00000584684 CXCL17Q6UXB2 119 aa15.25■□□□□ 0.03
ERBB2-220ENST00000584684 SH3RF1Q7Z6J0 888 aa15.25■□□□□ 0.03
ERBB2-220ENST00000584684 HOMER1Q86YM7 354 aa15.25■□□□□ 0.03
ERBB2-220ENST00000584684 FAM126BQ8IXS8 530 aa15.25■□□□□ 0.03
ERBB2-220ENST00000584684 TAAR1Q96RJ0 339 aa15.25■□□□□ 0.03
ERBB2-220ENST00000584684 PXMP2Q9NR77 195 aa15.25■□□□□ 0.03
ERBB2-220ENST00000584684 FRMPD4Q14CM0 1322 aa15.24■□□□□ 0.03
ERBB2-220ENST00000584684 SOX1O00570 391 aaPredicted RBP15.24■□□□□ 0.03
ERBB2-220ENST00000584684 CFBP00751 764 aa15.24■□□□□ 0.03
ERBB2-220ENST00000584684 PTGS1P23219 599 aa15.24■□□□□ 0.03
ERBB2-220ENST00000584684 TTLL4Q14679 1199 aa15.24■□□□□ 0.03
ERBB2-220ENST00000584684 STXBP2Q15833 593 aa15.24■□□□□ 0.03
ERBB2-220ENST00000584684 ERICH6BQ5W0A0 696 aa15.24■□□□□ 0.03
ERBB2-220ENST00000584684 CCDC62Q6P9F0 684 aa15.24■□□□□ 0.03
ERBB2-220ENST00000584684 KCNB2Q92953 911 aa15.24■□□□□ 0.03
ERBB2-220ENST00000584684 NEK1Q96PY6 1258 aa15.24■□□□□ 0.03
ERBB2-220ENST00000584684 MYL10Q9BUA6 226 aa15.24■□□□□ 0.03
ERBB2-220ENST00000584684 POLR3EQ9NVU0 708 aa15.24■□□□□ 0.03
ERBB2-220ENST00000584684 A6NJR5 290 aa15.23■□□□□ 0.03
ERBB2-220ENST00000584684 TXNP10599 105 aaKnown RBP15.23■□□□□ 0.03
ERBB2-220ENST00000584684 ITGB8P26012 769 aa15.23■□□□□ 0.03
ERBB2-220ENST00000584684 PURAQ00577 322 aaKnown RBP15.23■□□□□ 0.03
ERBB2-220ENST00000584684 EXOSC10Q01780 885 aaKnown RBP15.23■□□□□ 0.03
ERBB2-220ENST00000584684 BRDTQ58F21 947 aaPredicted RBP15.23■□□□□ 0.03
ERBB2-220ENST00000584684 ARHGEF16Q5VV41 709 aa15.23■□□□□ 0.03
ERBB2-220ENST00000584684 NFXL1Q6ZNB6 911 aa15.23■□□□□ 0.03
ERBB2-220ENST00000584684 RASEFQ8IZ41 740 aa15.23■□□□□ 0.03
ERBB2-220ENST00000584684 OR6J1Q8NGC5 347 aa15.23■□□□□ 0.03
ERBB2-220ENST00000584684 BADQ92934 168 aa15.23■□□□□ 0.03
ERBB2-220ENST00000584684 RRP36Q96EU6 259 aaKnown RBP15.23■□□□□ 0.03
ERBB2-220ENST00000584684 PDCD2LQ9BRP1 358 aa15.23■□□□□ 0.03
ERBB2-220ENST00000584684 TMEM39AQ9NV64 488 aa15.23■□□□□ 0.03
ERBB2-220ENST00000584684 PCDH10Q9P2E7 1040 aa15.23■□□□□ 0.03
ERBB2-220ENST00000584684 SLC12A7Q9Y666 1083 aa15.23■□□□□ 0.03
ERBB2-220ENST00000584684 GRIN2DO15399 1336 aa15.22■□□□□ 0.03
ERBB2-220ENST00000584684 GCOM1H8Y6P7 765 aaPredicted RBP15.22■□□□□ 0.03
ERBB2-220ENST00000584684 TLR3O15455 904 aaKnown RBP15.22■□□□□ 0.03
ERBB2-220ENST00000584684 EPB41L2O43491 1005 aaKnown RBP15.22■□□□□ 0.03
ERBB2-220ENST00000584684 KPNA6O60684 536 aa15.22■□□□□ 0.03
ERBB2-220ENST00000584684 EIF3JO75822 258 aaKnown RBP15.22■□□□□ 0.03
ERBB2-220ENST00000584684 ARIH2O95376 493 aa15.22■□□□□ 0.03
ERBB2-220ENST00000584684 CD4P01730 458 aa15.22■□□□□ 0.03
ERBB2-220ENST00000584684 NR3C2P08235 984 aa15.22■□□□□ 0.03
ERBB2-220ENST00000584684 HMGB1P09429 215 aaKnown RBP15.22■□□□□ 0.03
ERBB2-220ENST00000584684 POLR2MP0CAP2 368 aa15.22■□□□□ 0.03
ERBB2-220ENST00000584684 RAG1P15918 1043 aa15.22■□□□□ 0.03
ERBB2-220ENST00000584684 EIF2AK2P19525 551 aaKnown RBP15.22■□□□□ 0.03
ERBB2-220ENST00000584684 RCAN1P53805 252 aa15.22■□□□□ 0.03
ERBB2-220ENST00000584684 ITGA7Q13683 1181 aa15.22■□□□□ 0.03
ERBB2-220ENST00000584684 APOA5Q6Q788 366 aa15.22■□□□□ 0.03
ERBB2-220ENST00000584684 DHX32Q7L7V1 743 aaKnown RBP15.22■□□□□ 0.03
ERBB2-220ENST00000584684 EMID1Q96A84 441 aaPredicted RBP15.22■□□□□ 0.03
ERBB2-220ENST00000584684 VTI1AQ96AJ9 217 aa15.22■□□□□ 0.03
ERBB2-220ENST00000584684 SEC63Q9UGP8 760 aaKnown RBP15.22■□□□□ 0.03
ERBB2-220ENST00000584684 REC8O95072 547 aa15.21■□□□□ 0.03
ERBB2-220ENST00000584684 PLEKHA8P1O95397 391 aa15.21■□□□□ 0.03
ERBB2-220ENST00000584684 TIMP1P01033 207 aa15.21■□□□□ 0.03
ERBB2-220ENST00000584684 HOXA13P31271 388 aaPredicted RBP15.21■□□□□ 0.03
ERBB2-220ENST00000584684 HSPA4P34932 840 aa15.21■□□□□ 0.03
ERBB2-220ENST00000584684 ADCK5Q3MIX3 580 aa15.21■□□□□ 0.03
ERBB2-220ENST00000584684 TMTC3Q6ZXV5 915 aa15.21■□□□□ 0.03
ERBB2-220ENST00000584684 SRBD1Q8N5C6 995 aaKnown RBP15.21■□□□□ 0.03
ERBB2-220ENST00000584684 FANCBQ8NB91 859 aa15.21■□□□□ 0.03
ERBB2-220ENST00000584684 PIK3CDO00329 1044 aa15.2■□□□□ 0.02
ERBB2-220ENST00000584684 GH1P01241 217 aa15.2■□□□□ 0.02
ERBB2-220ENST00000584684 FPGSQ05932 587 aa15.2■□□□□ 0.02
ERBB2-220ENST00000584684 ARHGAP1Q07960 439 aa15.2■□□□□ 0.02
ERBB2-220ENST00000584684 PGM5Q15124 567 aa15.2■□□□□ 0.02
ERBB2-220ENST00000584684 KCNV1Q6PIU1 500 aa15.2■□□□□ 0.02
ERBB2-220ENST00000584684 VSIG10LQ86VR7 867 aa15.2■□□□□ 0.02
ERBB2-220ENST00000584684 MICU3Q86XE3 530 aa15.2■□□□□ 0.02
ERBB2-220ENST00000584684 TEX2Q8IWB9 1127 aa15.2■□□□□ 0.02
ERBB2-220ENST00000584684 LRCH3Q96II8 777 aa15.2■□□□□ 0.02
ERBB2-220ENST00000584684 MTG1Q9BT17 334 aaPredicted RBP15.2■□□□□ 0.02
ERBB2-220ENST00000584684 LRRC2Q9BYS8 371 aa15.2■□□□□ 0.02
ERBB2-220ENST00000584684 STAM2O75886 525 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms