RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 CABYRO75952 493 aa24.9■■□□□ 1.58
PPP4R1-228ENST00000584074 HSD17B4P51659 736 aa24.9■■□□□ 1.58
PPP4R1-228ENST00000584074 PPP2R5BQ15173 497 aa24.9■■□□□ 1.58
PPP4R1-228ENST00000584074 OR6J1Q8NGC5 347 aa24.9■■□□□ 1.58
PPP4R1-228ENST00000584074 PIBF1Q8WXW3 757 aa24.9■■□□□ 1.58
PPP4R1-228ENST00000584074 TMEM87BQ96K49 555 aa24.9■■□□□ 1.58
PPP4R1-228ENST00000584074 GRIN2DO15399 1336 aa24.89■■□□□ 1.58
PPP4R1-228ENST00000584074 PNMA6FA0A0J9YX94 578 aa24.89■■□□□ 1.58
PPP4R1-228ENST00000584074 DDAH1O94760 285 aa24.89■■□□□ 1.58
PPP4R1-228ENST00000584074 TXNP10599 105 aaKnown RBP24.89■■□□□ 1.58
PPP4R1-228ENST00000584074 NFXL1Q6ZNB6 911 aa24.89■■□□□ 1.58
PPP4R1-228ENST00000584074 FAM126BQ8IXS8 530 aa24.89■■□□□ 1.58
PPP4R1-228ENST00000584074 SLC43A3Q8NBI5 491 aa24.89■■□□□ 1.58
PPP4R1-228ENST00000584074 COPS5Q92905 334 aa24.89■■□□□ 1.58
PPP4R1-228ENST00000584074 IWS1Q96ST2 819 aa24.89■■□□□ 1.58
PPP4R1-228ENST00000584074 MAP3K14Q99558 947 aa24.89■■□□□ 1.58
PPP4R1-228ENST00000584074 LRRC2Q9BYS8 371 aa24.89■■□□□ 1.58
PPP4R1-228ENST00000584074 TBX21Q9UL17 535 aa24.89■■□□□ 1.58
PPP4R1-228ENST00000584074 ARIH2O95376 493 aa24.88■■□□□ 1.57
PPP4R1-228ENST00000584074 EIF2AK2P19525 551 aaKnown RBP24.88■■□□□ 1.57
PPP4R1-228ENST00000584074 HOXA13P31271 388 aaPredicted RBP24.88■■□□□ 1.57
PPP4R1-228ENST00000584074 PSMC6P62333 389 aa24.88■■□□□ 1.57
PPP4R1-228ENST00000584074 GHRHRQ02643 423 aa24.88■■□□□ 1.57
PPP4R1-228ENST00000584074 ITGA7Q13683 1181 aa24.88■■□□□ 1.57
PPP4R1-228ENST00000584074 SHHQ15465 462 aa24.88■■□□□ 1.57
PPP4R1-228ENST00000584074 C9orf50Q5SZB4 431 aa24.88■■□□□ 1.57
PPP4R1-228ENST00000584074 ARHGEF16Q5VV41 709 aa24.88■■□□□ 1.57
PPP4R1-228ENST00000584074 SEPT14Q6ZU15 432 aa24.88■■□□□ 1.57
PPP4R1-228ENST00000584074 CTCFLQ8NI51 663 aaPredicted RBP24.88■■□□□ 1.57
PPP4R1-228ENST00000584074 PXMP2Q9NR77 195 aa24.88■■□□□ 1.57
PPP4R1-228ENST00000584074 CCDC69A6NI79 296 aa24.87■■□□□ 1.57
PPP4R1-228ENST00000584074 KIF5BP33176 963 aa24.87■■□□□ 1.57
PPP4R1-228ENST00000584074 CPT1AP50416 773 aa24.87■■□□□ 1.57
PPP4R1-228ENST00000584074 STXBP2Q15833 593 aa24.87■■□□□ 1.57
PPP4R1-228ENST00000584074 RNF20Q5VTR2 975 aa24.87■■□□□ 1.57
PPP4R1-228ENST00000584074 TMTC2Q8N394 836 aa24.87■■□□□ 1.57
PPP4R1-228ENST00000584074 NKRFO15226 690 aaKnown RBP eCLIP24.86■■□□□ 1.573e-11■■□□□ 12.2
PPP4R1-228ENST00000584074 RXRAP19793 462 aa24.86■■□□□ 1.57
PPP4R1-228ENST00000584074 LIFRP42702 1097 aa24.86■■□□□ 1.57
PPP4R1-228ENST00000584074 EPHB4P54760 987 aa24.86■■□□□ 1.57
PPP4R1-228ENST00000584074 TRAF1Q13077 416 aa24.86■■□□□ 1.57
PPP4R1-228ENST00000584074 TTLL4Q14679 1199 aa24.86■■□□□ 1.57
PPP4R1-228ENST00000584074 CCDC62Q6P9F0 684 aa24.86■■□□□ 1.57
PPP4R1-228ENST00000584074 TIMP1P01033 207 aa24.85■■□□□ 1.57
PPP4R1-228ENST00000584074 CD4P01730 458 aa24.85■■□□□ 1.57
PPP4R1-228ENST00000584074 NR3C2P08235 984 aa24.85■■□□□ 1.57
PPP4R1-228ENST00000584074 MYL3P08590 195 aa24.85■■□□□ 1.57
PPP4R1-228ENST00000584074 PURAQ00577 322 aaKnown RBP24.85■■□□□ 1.57
PPP4R1-228ENST00000584074 RAB11FIP4Q86YS3 637 aa24.85■■□□□ 1.57
PPP4R1-228ENST00000584074 RASEFQ8IZ41 740 aa24.85■■□□□ 1.57
PPP4R1-228ENST00000584074 SPZ1Q9BXG8 430 aa24.85■■□□□ 1.57
PPP4R1-228ENST00000584074 POLR3EQ9NVU0 708 aa24.85■■□□□ 1.57
PPP4R1-228ENST00000584074 MAP3K20Q9NYL2 800 aaKnown RBP24.85■■□□□ 1.57
PPP4R1-228ENST00000584074 MYH6P13533 1939 aa24.84■■□□□ 1.57
PPP4R1-228ENST00000584074 TLR3O15455 904 aaKnown RBP24.84■■□□□ 1.57
PPP4R1-228ENST00000584074 EIF3JO75822 258 aaKnown RBP24.84■■□□□ 1.57
PPP4R1-228ENST00000584074 PLEKHA8P1O95397 391 aa24.84■■□□□ 1.57
PPP4R1-228ENST00000584074 FPGSQ05932 587 aa24.84■■□□□ 1.57
PPP4R1-228ENST00000584074 LY6KQ17RY6 165 aa24.84■■□□□ 1.57
PPP4R1-228ENST00000584074 CMTR1Q8N1G2 835 aaKnown RBP24.84■■□□□ 1.57
PPP4R1-228ENST00000584074 NEK1Q96PY6 1258 aa24.84■■□□□ 1.57
PPP4R1-228ENST00000584074 TRPV6Q9H1D0 765 aa24.84■■□□□ 1.57
PPP4R1-228ENST00000584074 A6NJR5 290 aa24.83■■□□□ 1.57
PPP4R1-228ENST00000584074 GCOM1H8Y6P7 765 aaPredicted RBP24.83■■□□□ 1.57
PPP4R1-228ENST00000584074 NEFLP07196 543 aa24.83■■□□□ 1.57
PPP4R1-228ENST00000584074 POLR2MP0CAP2 368 aa24.83■■□□□ 1.57
PPP4R1-228ENST00000584074 SRBD1Q8N5C6 995 aaKnown RBP24.83■■□□□ 1.57
PPP4R1-228ENST00000584074 SAMD3Q8N6K7 520 aa24.83■■□□□ 1.57
PPP4R1-228ENST00000584074 RRP36Q96EU6 259 aaKnown RBP24.83■■□□□ 1.57
PPP4R1-228ENST00000584074 LZTS2Q9BRK4 669 aa24.83■■□□□ 1.57
PPP4R1-228ENST00000584074 PDCD2LQ9BRP1 358 aa24.83■■□□□ 1.57
PPP4R1-228ENST00000584074 SLC12A7Q9Y666 1083 aa24.83■■□□□ 1.57
PPP4R1-228ENST00000584074 MYCLP12524 364 aaPredicted RBP24.82■■□□□ 1.56
PPP4R1-228ENST00000584074 SMARCA1P28370 1054 aa24.82■■□□□ 1.56
PPP4R1-228ENST00000584074 GNAQP50148 359 aa24.82■■□□□ 1.56
PPP4R1-228ENST00000584074 ADCK5Q3MIX3 580 aa24.82■■□□□ 1.56
PPP4R1-228ENST00000584074 BRDTQ58F21 947 aaPredicted RBP24.82■■□□□ 1.56
PPP4R1-228ENST00000584074 MFSD5Q6N075 450 aa24.82■■□□□ 1.56
PPP4R1-228ENST00000584074 GPR153Q6NV75 609 aa24.82■■□□□ 1.56
PPP4R1-228ENST00000584074 FCHSD1Q86WN1 690 aa24.82■■□□□ 1.56
PPP4R1-228ENST00000584074 IL31RAQ8NI17 732 aa24.82■■□□□ 1.56
PPP4R1-228ENST00000584074 MTG1Q9BT17 334 aaPredicted RBP24.82■■□□□ 1.56
PPP4R1-228ENST00000584074 PPP1R12CQ9BZL4 782 aa24.82■■□□□ 1.56
PPP4R1-228ENST00000584074 B4GALT4O60513 344 aa24.81■■□□□ 1.56
PPP4R1-228ENST00000584074 CALM1P0DP23 149 aa24.81■■□□□ 1.56
PPP4R1-228ENST00000584074 CALM2P0DP24 149 aa24.81■■□□□ 1.56
PPP4R1-228ENST00000584074 CALM3P0DP25 149 aa24.81■■□□□ 1.56
PPP4R1-228ENST00000584074 EXOSC10Q01780 885 aaKnown RBP24.81■■□□□ 1.56
PPP4R1-228ENST00000584074 ARHGAP1Q07960 439 aa24.81■■□□□ 1.56
PPP4R1-228ENST00000584074 TSGA10IPQ3SY00 556 aa24.81■■□□□ 1.56
PPP4R1-228ENST00000584074 Q7L0L9 218 aa24.81■■□□□ 1.56
PPP4R1-228ENST00000584074 SGMS1Q86VZ5 419 aa24.81■■□□□ 1.56
PPP4R1-228ENST00000584074 AFG1LQ8WV93 481 aa24.81■■□□□ 1.56
PPP4R1-228ENST00000584074 TCEANC2Q96MN5 208 aa24.81■■□□□ 1.56
PPP4R1-228ENST00000584074 SEZ6LQ9BYH1 1024 aa24.81■■□□□ 1.56
PPP4R1-228ENST00000584074 DDX41Q9UJV9 622 aaKnown RBP24.81■■□□□ 1.56
PPP4R1-228ENST00000584074 GH1P01241 217 aa24.8■■□□□ 1.56
PPP4R1-228ENST00000584074 CYP2C18P33260 490 aa24.8■■□□□ 1.56
PPP4R1-228ENST00000584074 PGM5Q15124 567 aa24.8■■□□□ 1.56
PPP4R1-228ENST00000584074 VSIG10LQ86VR7 867 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms