RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 PRO3102Q9H379 93 aa19.26■□□□□ 0.67
SREBF1-219ENST00000580540 DNAH12Q6ZR08 3092 aa19.26■□□□□ 0.67
SREBF1-219ENST00000580540 LRRC37A2A6NM11 1700 aa19.25■□□□□ 0.67
SREBF1-219ENST00000580540 OPLAHO14841 1288 aa19.25■□□□□ 0.67
SREBF1-219ENST00000580540 ZEB2O60315 1214 aa19.25■□□□□ 0.67
SREBF1-219ENST00000580540 REC8O95072 547 aa19.25■□□□□ 0.67
SREBF1-219ENST00000580540 FGD1P98174 961 aa19.25■□□□□ 0.67
SREBF1-219ENST00000580540 PPP2R5BQ15173 497 aa19.25■□□□□ 0.67
SREBF1-219ENST00000580540 TSGA10IPQ3SY00 556 aa19.25■□□□□ 0.67
SREBF1-219ENST00000580540 C1orf53Q5VUE5 145 aa19.25■□□□□ 0.67
SREBF1-219ENST00000580540 CXCL17Q6UXB2 119 aa19.25■□□□□ 0.67
SREBF1-219ENST00000580540 CCDC82Q8N4S0 544 aa19.25■□□□□ 0.67
SREBF1-219ENST00000580540 OR6J1Q8NGC5 347 aa19.25■□□□□ 0.67
SREBF1-219ENST00000580540 SCFD2Q8WU76 684 aa19.25■□□□□ 0.67
SREBF1-219ENST00000580540 SPZ1Q9BXG8 430 aa19.25■□□□□ 0.67
SREBF1-219ENST00000580540 SEC63Q9UGP8 760 aaKnown RBP19.25■□□□□ 0.67
SREBF1-219ENST00000580540 NAP1L2Q9ULW6 460 aaPredicted RBP19.25■□□□□ 0.67
SREBF1-219ENST00000580540 Q9Y3F1 56 aa19.25■□□□□ 0.67
SREBF1-219ENST00000580540 RBM47A0AV96 593 aaKnown RBP19.24■□□□□ 0.67
SREBF1-219ENST00000580540 GCOM1H8Y6P7 765 aaPredicted RBP19.24■□□□□ 0.67
SREBF1-219ENST00000580540 POLR2MP0CAP2 368 aa19.24■□□□□ 0.67
SREBF1-219ENST00000580540 TXNP10599 105 aaKnown RBP19.24■□□□□ 0.67
SREBF1-219ENST00000580540 MYCLP12524 364 aaPredicted RBP19.24■□□□□ 0.67
SREBF1-219ENST00000580540 HSD17B4P51659 736 aa19.24■□□□□ 0.67
SREBF1-219ENST00000580540 EXOSC10Q01780 885 aaKnown RBP19.24■□□□□ 0.67
SREBF1-219ENST00000580540 STXBP2Q15833 593 aa19.24■□□□□ 0.67
SREBF1-219ENST00000580540 SH3RF1Q7Z6J0 888 aa19.24■□□□□ 0.67
SREBF1-219ENST00000580540 FCHSD1Q86WN1 690 aa19.24■□□□□ 0.67
SREBF1-219ENST00000580540 SRBD1Q8N5C6 995 aaKnown RBP19.24■□□□□ 0.67
SREBF1-219ENST00000580540 FANCBQ8NB91 859 aa19.24■□□□□ 0.67
SREBF1-219ENST00000580540 JAKMIP1Q96N16 626 aaKnown RBP19.24■□□□□ 0.67
SREBF1-219ENST00000580540 IWS1Q96ST2 819 aa19.24■□□□□ 0.67
SREBF1-219ENST00000580540 PDLIM7Q9NR12 457 aa19.24■□□□□ 0.67
SREBF1-219ENST00000580540 ELP1O95163 1332 aa19.24■□□□□ 0.67
SREBF1-219ENST00000580540 DCDC2CA8MYV0 355 aa19.23■□□□□ 0.67
SREBF1-219ENST00000580540 CLTBP09497 229 aa19.23■□□□□ 0.67
SREBF1-219ENST00000580540 CPA1P15085 419 aa19.23■□□□□ 0.67
SREBF1-219ENST00000580540 BMP8BP34820 402 aa19.23■□□□□ 0.67
SREBF1-219ENST00000580540 HSPA4P34932 840 aa19.23■□□□□ 0.67
SREBF1-219ENST00000580540 TTLL4Q14679 1199 aa19.23■□□□□ 0.67
SREBF1-219ENST00000580540 SGMS1Q86VZ5 419 aa19.23■□□□□ 0.67
SREBF1-219ENST00000580540 COPS5Q92905 334 aa19.23■□□□□ 0.67
SREBF1-219ENST00000580540 PXMP2Q9NR77 195 aa19.23■□□□□ 0.67
SREBF1-219ENST00000580540 TMEM39AQ9NV64 488 aa19.23■□□□□ 0.67
SREBF1-219ENST00000580540 A0A0U1RQG5 324 aaPredicted RBP19.22■□□□□ 0.67
SREBF1-219ENST00000580540 hCG_1642624A0A1W2PR95 340 aa19.22■□□□□ 0.67
SREBF1-219ENST00000580540 NR3C2P08235 984 aa19.22■□□□□ 0.67
SREBF1-219ENST00000580540 MYL3P08590 195 aa19.22■□□□□ 0.67
SREBF1-219ENST00000580540 HMGB1P09429 215 aaKnown RBP19.22■□□□□ 0.67
SREBF1-219ENST00000580540 SMARCA1P28370 1054 aa19.22■□□□□ 0.67
SREBF1-219ENST00000580540 FXR1P51114 621 aaKnown RBP eCLIP19.22■□□□□ 0.67
SREBF1-219ENST00000580540 NKX3-2P78367 333 aa19.22■□□□□ 0.67
SREBF1-219ENST00000580540 MAP3K20Q9NYL2 800 aaKnown RBP19.22■□□□□ 0.67
SREBF1-219ENST00000580540 SNX14Q9Y5W7 946 aa19.22■□□□□ 0.67
SREBF1-219ENST00000580540 KLF18A0A0U1RQI7 1052 aa19.21■□□□□ 0.67
SREBF1-219ENST00000580540 TRIM43BA6NCK2 446 aa19.21■□□□□ 0.67
SREBF1-219ENST00000580540 ARVCFO00192 962 aa19.21■□□□□ 0.67
SREBF1-219ENST00000580540 NKRFO15226 690 aaKnown RBP eCLIP19.21■□□□□ 0.67
SREBF1-219ENST00000580540 ZBTB43O43298 467 aa19.21■□□□□ 0.67
SREBF1-219ENST00000580540 CABYRO75952 493 aa19.21■□□□□ 0.67
SREBF1-219ENST00000580540 BRDTQ58F21 947 aaPredicted RBP19.21■□□□□ 0.67
SREBF1-219ENST00000580540 APOA5Q6Q788 366 aa19.21■□□□□ 0.67
SREBF1-219ENST00000580540 SAMD3Q8N6K7 520 aa19.21■□□□□ 0.67
SREBF1-219ENST00000580540 BADQ92934 168 aa19.21■□□□□ 0.67
SREBF1-219ENST00000580540 TRIM43Q96BQ3 446 aaPredicted RBP19.21■□□□□ 0.67
SREBF1-219ENST00000580540 BRPF3Q9ULD4 1205 aa19.21■□□□□ 0.67
SREBF1-219ENST00000580540 A0A1W2PPC1 479 aa19.2■□□□□ 0.66
SREBF1-219ENST00000580540 EIF3JO75822 258 aaKnown RBP19.2■□□□□ 0.66
SREBF1-219ENST00000580540 ARIH2O95376 493 aa19.2■□□□□ 0.66
SREBF1-219ENST00000580540 CPT1AP50416 773 aa19.2■□□□□ 0.66
SREBF1-219ENST00000580540 PSMC6P62333 389 aa19.2■□□□□ 0.66
SREBF1-219ENST00000580540 GHRHRQ02643 423 aa19.2■□□□□ 0.66
SREBF1-219ENST00000580540 RTN1Q16799 776 aa19.2■□□□□ 0.66
SREBF1-219ENST00000580540 LY6KQ17RY6 165 aa19.2■□□□□ 0.66
SREBF1-219ENST00000580540 BLOC1S2Q6QNY1 142 aa19.2■□□□□ 0.66
SREBF1-219ENST00000580540 TMTC3Q6ZXV5 915 aa19.2■□□□□ 0.66
SREBF1-219ENST00000580540 ANKRD33Q7Z3H0 272 aa19.2■□□□□ 0.66
SREBF1-219ENST00000580540 KCNB2Q92953 911 aa19.2■□□□□ 0.66
SREBF1-219ENST00000580540 CUL5Q93034 780 aa19.2■□□□□ 0.66
SREBF1-219ENST00000580540 ZFP91Q96JP5 570 aaPredicted RBP19.2■□□□□ 0.66
SREBF1-219ENST00000580540 TOX2Q96NM4 488 aa19.2■□□□□ 0.66
SREBF1-219ENST00000580540 PDCD2LQ9BRP1 358 aa19.2■□□□□ 0.66
SREBF1-219ENST00000580540 MROH7Q68CQ1 1323 aa19.2■□□□□ 0.66
SREBF1-219ENST00000580540 GOLGA8AA7E2F4 631 aa19.19■□□□□ 0.66
SREBF1-219ENST00000580540 GOLGA8BA8MQT2 603 aa19.19■□□□□ 0.66
SREBF1-219ENST00000580540 RAG1P15918 1043 aa19.19■□□□□ 0.66
SREBF1-219ENST00000580540 CDK7P50613 346 aa19.19■□□□□ 0.66
SREBF1-219ENST00000580540 FAAP100Q0VG06 881 aa19.19■□□□□ 0.66
SREBF1-219ENST00000580540 ITGA7Q13683 1181 aa19.19■□□□□ 0.66
SREBF1-219ENST00000580540 Q6ZUG5 572 aa19.19■□□□□ 0.66
SREBF1-219ENST00000580540 TDHQ8IZJ6 230 aa19.19■□□□□ 0.66
SREBF1-219ENST00000580540 SMARCC2Q8TAQ2 1214 aa19.19■□□□□ 0.66
SREBF1-219ENST00000580540 POLR3EQ9NVU0 708 aa19.19■□□□□ 0.66
SREBF1-219ENST00000580540 RBM28Q9NW13 759 aaKnown RBP19.19■□□□□ 0.66
SREBF1-219ENST00000580540 MRVI1Q9Y6F6 885 aa19.19■□□□□ 0.66
SREBF1-219ENST00000580540 TLR3O15455 904 aaKnown RBP19.18■□□□□ 0.66
SREBF1-219ENST00000580540 SLC34A2O95436 690 aa19.18■□□□□ 0.66
SREBF1-219ENST00000580540 CCND2P30279 289 aa19.18■□□□□ 0.66
SREBF1-219ENST00000580540 CHMP4BP1P59074 171 aa19.18■□□□□ 0.66
SREBF1-219ENST00000580540 APOBRQ0VD83 1088 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms