RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 PRPF38AQ8NAV1 312 aaKnown RBP9.63□□□□□ -0.87
PPP4R1-211ENST00000578875 DBF4BQ8NFT6 615 aa9.63□□□□□ -0.87
PPP4R1-211ENST00000578875 KIFC2Q96AC6 838 aa9.63□□□□□ -0.87
PPP4R1-211ENST00000578875 RIOK1Q9BRS2 568 aaKnown RBP9.63□□□□□ -0.87
PPP4R1-211ENST00000578875 PHF7Q9BWX1 381 aaPredicted RBP9.63□□□□□ -0.87
PPP4R1-211ENST00000578875 A1CFQ9NQ94 594 aaKnown RBP9.63□□□□□ -0.87
PPP4R1-211ENST00000578875 GPHNQ9NQX3 736 aaPredicted RBP9.63□□□□□ -0.87
PPP4R1-211ENST00000578875 BARX2Q9UMQ3 279 aaPredicted RBP9.63□□□□□ -0.87
PPP4R1-211ENST00000578875 ASB14A6NK59 587 aa9.62□□□□□ -0.87
PPP4R1-211ENST00000578875 ATP2A1O14983 1001 aa9.62□□□□□ -0.87
PPP4R1-211ENST00000578875 ZBED4O75132 1171 aa9.62□□□□□ -0.87
PPP4R1-211ENST00000578875 LINC00271P0C7V0 271 aa9.62□□□□□ -0.87
PPP4R1-211ENST00000578875 ZNF618Q5T7W0 954 aa9.62□□□□□ -0.87
PPP4R1-211ENST00000578875 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.62□□□□□ -0.87
PPP4R1-211ENST00000578875 WDR63Q8IWG1 891 aa9.62□□□□□ -0.87
PPP4R1-211ENST00000578875 SMRP1Q8NCR6 262 aa9.62□□□□□ -0.87
PPP4R1-211ENST00000578875 CHST13Q8NET6 341 aa9.62□□□□□ -0.87
PPP4R1-211ENST00000578875 AFAP1L1Q8TED9 768 aa9.62□□□□□ -0.87
PPP4R1-211ENST00000578875 SDR42E1Q8WUS8 393 aa9.62□□□□□ -0.87
PPP4R1-211ENST00000578875 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.62□□□□□ -0.87
PPP4R1-211ENST00000578875 WDR11Q9BZH6 1224 aa9.62□□□□□ -0.87
PPP4R1-211ENST00000578875 USP17L12C9JPN9 530 aa9.61□□□□□ -0.87
PPP4R1-211ENST00000578875 USP17L21D6R901 530 aa9.61□□□□□ -0.87
PPP4R1-211ENST00000578875 SRGAP3O43295 1099 aa9.61□□□□□ -0.87
PPP4R1-211ENST00000578875 BRD1O95696 1058 aa9.61□□□□□ -0.87
PPP4R1-211ENST00000578875 DNAJB1P25685 340 aa9.61□□□□□ -0.87
PPP4R1-211ENST00000578875 CDK8P49336 464 aa9.61□□□□□ -0.87
PPP4R1-211ENST00000578875 ZNF200P98182 395 aaPredicted RBP9.61□□□□□ -0.87
PPP4R1-211ENST00000578875 COL9A3Q14050 684 aaPredicted RBP9.61□□□□□ -0.87
PPP4R1-211ENST00000578875 ACAP1Q15027 740 aa9.61□□□□□ -0.87
PPP4R1-211ENST00000578875 MCTP2Q6DN12 878 aa9.61□□□□□ -0.87
PPP4R1-211ENST00000578875 ASTLQ6HA08 431 aaPredicted RBP9.61□□□□□ -0.87
PPP4R1-211ENST00000578875 ZBTB33Q86T24 672 aa9.61□□□□□ -0.87
PPP4R1-211ENST00000578875 RBM23Q86U06 439 aaKnown RBP9.61□□□□□ -0.87
PPP4R1-211ENST00000578875 OR6J1Q8NGC5 347 aa9.61□□□□□ -0.87
PPP4R1-211ENST00000578875 TOP1MTQ969P6 601 aa9.61□□□□□ -0.87
PPP4R1-211ENST00000578875 CHAMP1Q96JM3 812 aa9.61□□□□□ -0.87
PPP4R1-211ENST00000578875 SAMD11Q96NU1 681 aa9.61□□□□□ -0.87
PPP4R1-211ENST00000578875 YME1L1Q96TA2 773 aa9.61□□□□□ -0.87
PPP4R1-211ENST00000578875 SH2D4AQ9H788 454 aa9.61□□□□□ -0.87
PPP4R1-211ENST00000578875 SLC38A10Q9HBR0 1119 aa9.61□□□□□ -0.87
PPP4R1-211ENST00000578875 COG6Q9Y2V7 657 aa9.61□□□□□ -0.87
PPP4R1-211ENST00000578875 R4GN57 208 aa9.61□□□□□ -0.87
PPP4R1-211ENST00000578875 ATG2AQ2TAZ0 1938 aa9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 ZNF316A6NFI3 1004 aaPredicted RBP9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 F5H6K3 240 aa9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 PRKAB2O43741 272 aa9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 GLP2RO95838 553 aa9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 LMNAP02545 664 aaKnown RBP9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 AMHP03971 560 aa9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 CTNNB1P35222 781 aa9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 BMPR1AP36894 532 aa9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 ATXN1P54253 815 aaKnown RBP9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 SNAP25P60880 206 aa9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 PTPN11Q06124 597 aaPredicted RBP9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 KLRC3Q07444 240 aa9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 COASYQ13057 564 aa9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 KREMEN2Q8NCW0 462 aa9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 CAGE1Q8TC20 777 aa9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 SSH1Q8WYL5 1049 aa9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 CHMP4CQ96CF2 233 aa9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 MEIS3Q99687 375 aa9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 KANSL2Q9H9L4 492 aa9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 GOPCQ9HD26 462 aa9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 DCP1AQ9NPI6 582 aaPredicted RBP9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 FBXO40Q9UH90 709 aa9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 CTDP1Q9Y5B0 961 aaPredicted RBP9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 MYO10Q9HD67 2058 aa9.6□□□□□ -0.87
PPP4R1-211ENST00000578875 TANC1Q9C0D5 1861 aa9.59□□□□□ -0.87
PPP4R1-211ENST00000578875 SCN10AQ9Y5Y9 1956 aa9.59□□□□□ -0.87
PPP4R1-211ENST00000578875 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.59□□□□□ -0.87
PPP4R1-211ENST00000578875 DCDC2BA2VCK2 349 aa9.59□□□□□ -0.87
PPP4R1-211ENST00000578875 NDUFB10O96000 172 aa9.59□□□□□ -0.87
PPP4R1-211ENST00000578875 CPT1AP50416 773 aa9.59□□□□□ -0.87
PPP4R1-211ENST00000578875 HIC1Q14526 733 aa9.59□□□□□ -0.87
PPP4R1-211ENST00000578875 ANGPT1Q15389 498 aa9.59□□□□□ -0.87
PPP4R1-211ENST00000578875 TRIM71Q2Q1W2 868 aaKnown RBP9.59□□□□□ -0.87
PPP4R1-211ENST00000578875 SLFNL1Q499Z3 407 aa9.59□□□□□ -0.87
PPP4R1-211ENST00000578875 MUM1L1Q5H9M0 696 aa9.59□□□□□ -0.87
PPP4R1-211ENST00000578875 CCDC158Q5M9N0 1113 aa9.59□□□□□ -0.87
PPP4R1-211ENST00000578875 APOL5Q9BWW9 433 aa9.59□□□□□ -0.87
PPP4R1-211ENST00000578875 PRKRIP1Q9H875 184 aaPredicted RBP9.59□□□□□ -0.87
PPP4R1-211ENST00000578875 SH2B1Q9NRF2 756 aaPredicted RBP9.59□□□□□ -0.87
PPP4R1-211ENST00000578875 RNF146Q9NTX7 359 aa9.59□□□□□ -0.87
PPP4R1-211ENST00000578875 HDAC6Q9UBN7 1215 aa9.59□□□□□ -0.87
PPP4R1-211ENST00000578875 CDH22Q9UJ99 828 aa9.59□□□□□ -0.87
PPP4R1-211ENST00000578875 PTPRCP08575 1304 aa9.58□□□□□ -0.88
PPP4R1-211ENST00000578875 ANKRD11Q6UB99 2663 aaPredicted RBP9.58□□□□□ -0.88
PPP4R1-211ENST00000578875 MAGEB6P1A0A0J9YX57 407 aa9.58□□□□□ -0.88
PPP4R1-211ENST00000578875 A6NJR5 290 aa9.58□□□□□ -0.88
PPP4R1-211ENST00000578875 C5orf67F2Z3F1 127 aa9.58□□□□□ -0.88
PPP4R1-211ENST00000578875 PER2O15055 1255 aa9.58□□□□□ -0.88
PPP4R1-211ENST00000578875 EFCAB14O75071 495 aa9.58□□□□□ -0.88
PPP4R1-211ENST00000578875 NRIP1P48552 1158 aa9.58□□□□□ -0.88
PPP4R1-211ENST00000578875 EFHBQ8N7U6 833 aa9.58□□□□□ -0.88
PPP4R1-211ENST00000578875 CYP2W1Q8TAV3 490 aa9.58□□□□□ -0.88
PPP4R1-211ENST00000578875 SUSD6Q92537 303 aa9.58□□□□□ -0.88
PPP4R1-211ENST00000578875 KAT2BQ92831 832 aa9.58□□□□□ -0.88
PPP4R1-211ENST00000578875 HINFPQ9BQA5 517 aa9.58□□□□□ -0.88
PPP4R1-211ENST00000578875 ACAD9Q9H845 621 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms