RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 MYPNQ86TC9 1320 aa11.09□□□□□ -0.63
NPLOC4-219ENST00000576713 TNRC18O15417 2968 aaPredicted RBP11.08□□□□□ -0.64
NPLOC4-219ENST00000576713 TRDNQ13061 729 aa11.08□□□□□ -0.64
NPLOC4-219ENST00000576713 CCDC96Q2M329 555 aa11.08□□□□□ -0.64
NPLOC4-219ENST00000576713 TMEM67Q5HYA8 995 aa11.08□□□□□ -0.64
NPLOC4-219ENST00000576713 IFIT1BQ5T764 474 aaKnown RBP11.08□□□□□ -0.64
NPLOC4-219ENST00000576713 NBPF11Q86T75 865 aa11.08□□□□□ -0.64
NPLOC4-219ENST00000576713 RAB11FIP4Q86YS3 637 aa11.08□□□□□ -0.64
NPLOC4-219ENST00000576713 DCAF4Q8WV16 495 aa11.08□□□□□ -0.64
NPLOC4-219ENST00000576713 UCN2Q96RP3 112 aa11.08□□□□□ -0.64
NPLOC4-219ENST00000576713 UBAC1Q9BSL1 405 aa11.08□□□□□ -0.64
NPLOC4-219ENST00000576713 UBA5Q9GZZ9 404 aa11.08□□□□□ -0.64
NPLOC4-219ENST00000576713 KAT14Q9H8E8 782 aa11.08□□□□□ -0.64
NPLOC4-219ENST00000576713 SLC38A10Q9HBR0 1119 aa11.08□□□□□ -0.64
NPLOC4-219ENST00000576713 RAVER2Q9HCJ3 691 aaKnown RBP11.08□□□□□ -0.64
NPLOC4-219ENST00000576713 SRRDQ9UH36 339 aa11.08□□□□□ -0.64
NPLOC4-219ENST00000576713 FEM1BQ9UK73 627 aa11.08□□□□□ -0.64
NPLOC4-219ENST00000576713 PRR12Q9ULL5 1215 aa11.08□□□□□ -0.64
NPLOC4-219ENST00000576713 TNPO2O14787 897 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-219ENST00000576713 REC8O95072 547 aa11.07□□□□□ -0.64
NPLOC4-219ENST00000576713 ERCC3P19447 782 aa11.07□□□□□ -0.64
NPLOC4-219ENST00000576713 RXRAP19793 462 aa11.07□□□□□ -0.64
NPLOC4-219ENST00000576713 FLT3LGP49771 235 aa11.07□□□□□ -0.64
NPLOC4-219ENST00000576713 STAT2P52630 851 aa11.07□□□□□ -0.64
NPLOC4-219ENST00000576713 FCGRTP55899 365 aa11.07□□□□□ -0.64
NPLOC4-219ENST00000576713 TROAPQ12815 778 aa11.07□□□□□ -0.64
NPLOC4-219ENST00000576713 PLS1Q14651 629 aa11.07□□□□□ -0.64
NPLOC4-219ENST00000576713 BTNL9Q6UXG8 535 aa11.07□□□□□ -0.64
NPLOC4-219ENST00000576713 GPR142Q7Z601 462 aa11.07□□□□□ -0.64
NPLOC4-219ENST00000576713 PRPF38AQ8NAV1 312 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-219ENST00000576713 SH3TC2Q8TF17 1288 aa11.07□□□□□ -0.64
NPLOC4-219ENST00000576713 USP6NLQ92738 828 aa11.07□□□□□ -0.64
NPLOC4-219ENST00000576713 AGBL1Q96MI9 1066 aa11.07□□□□□ -0.64
NPLOC4-219ENST00000576713 JAKMIP1Q96N16 626 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-219ENST00000576713 NEK1Q96PY6 1258 aa11.07□□□□□ -0.64
NPLOC4-219ENST00000576713 ARID3AQ99856 593 aa11.07□□□□□ -0.64
NPLOC4-219ENST00000576713 PKD2L1Q9P0L9 805 aa11.07□□□□□ -0.64
NPLOC4-219ENST00000576713 MAD2L2Q9UI95 211 aa11.07□□□□□ -0.64
NPLOC4-219ENST00000576713 CDV3Q9UKY7 258 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-219ENST00000576713 ISY1Q9ULR0 285 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-219ENST00000576713 DNAH12Q6ZR08 3092 aa11.07□□□□□ -0.64
NPLOC4-219ENST00000576713 PLA2G6O60733 806 aa11.06□□□□□ -0.64
NPLOC4-219ENST00000576713 ELNP15502 786 aa11.06□□□□□ -0.64
NPLOC4-219ENST00000576713 MCM5P33992 734 aa11.06□□□□□ -0.64
NPLOC4-219ENST00000576713 NT5C2P49902 561 aa11.06□□□□□ -0.64
NPLOC4-219ENST00000576713 WTAPQ15007 396 aa11.06□□□□□ -0.64
NPLOC4-219ENST00000576713 CCDC174Q6PII3 467 aa11.06□□□□□ -0.64
NPLOC4-219ENST00000576713 RIOX2Q8IUF8 465 aa11.06□□□□□ -0.64
NPLOC4-219ENST00000576713 CPXCR1Q8N123 301 aa11.06□□□□□ -0.64
NPLOC4-219ENST00000576713 PHTF2Q8N3S3 785 aa11.06□□□□□ -0.64
NPLOC4-219ENST00000576713 CDK15Q96Q40 435 aa11.06□□□□□ -0.64
NPLOC4-219ENST00000576713 BRPF3Q9ULD4 1205 aa11.06□□□□□ -0.64
NPLOC4-219ENST00000576713 MAP4K5Q9Y4K4 846 aa11.06□□□□□ -0.64
NPLOC4-219ENST00000576713 PALM3A6NDB9 673 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 PIK3CDO00329 1044 aa11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 CYTH3O43739 400 aa11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 STAT3P40763 770 aa11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 FOXC1Q12948 553 aa11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 IKQ13123 557 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 KIF22Q14807 665 aa11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 GRM4Q14833 912 aa11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 CCL14Q16627 93 aa11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 NBPF20Q3BBV1 942 aa11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 CCDC178Q5BJE1 867 aa11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 MUM1L1Q5H9M0 696 aa11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 SYDE2Q5VT97 1194 aa11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 WDR78Q5VTH9 848 aa11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 RNF20Q5VTR2 975 aa11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 SNRNP48Q6IEG0 339 aaKnown RBP11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 PLEKHH3Q7Z736 793 aa11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 FAM160B2Q86V87 743 aa11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 CCDC144CPQ8IYA2 1237 aa11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 ZNF654Q8IZM8 581 aa11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 CMTR1Q8N1G2 835 aaKnown RBP11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 MB21D1Q8N884 522 aa11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 GTF3C2Q8WUA4 911 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 RANBP17Q9H2T7 1088 aaKnown RBP11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 FLRT1Q9NZU1 646 aa11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 ZNF236Q9UL36 1845 aa11.05□□□□□ -0.64
NPLOC4-219ENST00000576713 ATP2A1O14983 1001 aa11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 EPB41L2O43491 1005 aaKnown RBP11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 PPP1R11O60927 126 aaPredicted RBP11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 COBLO75128 1261 aa11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 RGS20O76081 388 aa11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 PLEKHA8P1O95397 391 aa11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 MYCP01106 439 aaPredicted RBP11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 ZKSCAN1P17029 563 aaPredicted RBP11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 RPS6KB1P23443 525 aa11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 MAPK4P31152 587 aa11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 GRB14Q14449 540 aa11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 DHX32Q7L7V1 743 aaKnown RBP11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 VASH1Q7L8A9 365 aaPredicted RBP11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 NCAPG2Q86XI2 1143 aa11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 ADGRF4Q8IZF3 695 aa11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 SHCBP1Q8NEM2 672 aa11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 NPLOC4Q8TAT6 608 aa11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 CHURC1Q8WUH1 139 aa11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 TRIB2Q92519 343 aa11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 TMEM87BQ96K49 555 aa11.04□□□□□ -0.64
NPLOC4-219ENST00000576713 TEX13BQ9BXU2 312 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms