RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 FAM161BQ96MY7 647 aa13.84□□□□□ -0.19
LITAF-219ENST00000576334 LY9Q9HBG7 655 aa13.84□□□□□ -0.19
LITAF-219ENST00000576334 ERICH2A1L162 156 aa13.83□□□□□ -0.2
LITAF-219ENST00000576334 ZBTB5O15062 677 aa13.83□□□□□ -0.2
LITAF-219ENST00000576334 PRC1O43663 620 aa13.83□□□□□ -0.2
LITAF-219ENST00000576334 SORBS3O60504 671 aa13.83□□□□□ -0.2
LITAF-219ENST00000576334 CD4P01730 458 aa13.83□□□□□ -0.2
LITAF-219ENST00000576334 MYL3P08590 195 aa13.83□□□□□ -0.2
LITAF-219ENST00000576334 TXNP10599 105 aaKnown RBP13.83□□□□□ -0.2
LITAF-219ENST00000576334 CYP2C18P33260 490 aa13.83□□□□□ -0.2
LITAF-219ENST00000576334 NECTIN1Q15223 517 aa13.83□□□□□ -0.2
LITAF-219ENST00000576334 C16orf59Q7L2K0 433 aa13.83□□□□□ -0.2
LITAF-219ENST00000576334 CMTR1Q8N1G2 835 aaKnown RBP13.83□□□□□ -0.2
LITAF-219ENST00000576334 SLC43A3Q8NBI5 491 aa13.83□□□□□ -0.2
LITAF-219ENST00000576334 RMDN3Q96TC7 470 aa13.83□□□□□ -0.2
LITAF-219ENST00000576334 AMNQ9BXJ7 453 aa13.83□□□□□ -0.2
LITAF-219ENST00000576334 RIOX1Q9H6W3 641 aa13.83□□□□□ -0.2
LITAF-219ENST00000576334 PNMA2Q9UL42 364 aa13.83□□□□□ -0.2
LITAF-219ENST00000576334 MRPL11Q9Y3B7 192 aaKnown RBP13.83□□□□□ -0.2
LITAF-219ENST00000576334 PCDHA1Q9Y5I3 950 aa13.83□□□□□ -0.2
LITAF-219ENST00000576334 KIAA1217Q5T5P2 1943 aa13.83□□□□□ -0.2
LITAF-219ENST00000576334 B4GALT4O60513 344 aa13.82□□□□□ -0.2
LITAF-219ENST00000576334 TIMP1P01033 207 aa13.82□□□□□ -0.2
LITAF-219ENST00000576334 ACRP10323 421 aa13.82□□□□□ -0.2
LITAF-219ENST00000576334 HSD17B4P51659 736 aa13.82□□□□□ -0.2
LITAF-219ENST00000576334 PURAQ00577 322 aaKnown RBP13.82□□□□□ -0.2
LITAF-219ENST00000576334 PPP2R5BQ15173 497 aa13.82□□□□□ -0.2
LITAF-219ENST00000576334 BMP2KLQ5H9B9 411 aa13.82□□□□□ -0.2
LITAF-219ENST00000576334 ZNF654Q8IZM8 581 aa13.82□□□□□ -0.2
LITAF-219ENST00000576334 IL31RAQ8NI17 732 aa13.82□□□□□ -0.2
LITAF-219ENST00000576334 TCEANC2Q96MN5 208 aa13.82□□□□□ -0.2
LITAF-219ENST00000576334 PXMP2Q9NR77 195 aa13.82□□□□□ -0.2
LITAF-219ENST00000576334 Q9Y3F1 56 aa13.82□□□□□ -0.2
LITAF-219ENST00000576334 LOC102724159A0A0B4J2E5 919 aa13.81□□□□□ -0.2
LITAF-219ENST00000576334 SH2B2O14492 632 aaPredicted RBP13.81□□□□□ -0.2
LITAF-219ENST00000576334 PLEKHA8P1O95397 391 aa13.81□□□□□ -0.2
LITAF-219ENST00000576334 CSF2RAP15509 400 aa13.81□□□□□ -0.2
LITAF-219ENST00000576334 CHMP4BP1P59074 171 aa13.81□□□□□ -0.2
LITAF-219ENST00000576334 FPGSQ05932 587 aa13.81□□□□□ -0.2
LITAF-219ENST00000576334 SART3Q15020 963 aaKnown RBP13.81□□□□□ -0.2
LITAF-219ENST00000576334 PWP2Q15269 919 aaKnown RBP13.81□□□□□ -0.2
LITAF-219ENST00000576334 ARHGEF16Q5VV41 709 aa13.81□□□□□ -0.2
LITAF-219ENST00000576334 FAM109BQ6ICB4 259 aaPredicted RBP13.81□□□□□ -0.2
LITAF-219ENST00000576334 CCDC62Q6P9F0 684 aa13.81□□□□□ -0.2
LITAF-219ENST00000576334 CATIPQ7Z7H3 387 aa13.81□□□□□ -0.2
LITAF-219ENST00000576334 MCF2L2Q86YR7 1114 aa13.81□□□□□ -0.2
LITAF-219ENST00000576334 NSUN6Q8TEA1 469 aaKnown RBP13.81□□□□□ -0.2
LITAF-219ENST00000576334 SCFD2Q8WU76 684 aa13.81□□□□□ -0.2
LITAF-219ENST00000576334 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.81□□□□□ -0.2
LITAF-219ENST00000576334 TRMT13Q9NUP7 481 aaKnown RBP13.81□□□□□ -0.2
LITAF-219ENST00000576334 MTMR10Q9NXD2 777 aa13.81□□□□□ -0.2
LITAF-219ENST00000576334 MYH7BA7E2Y1 1941 aa13.8□□□□□ -0.2
LITAF-219ENST00000576334 hCG_1642624A0A1W2PR95 340 aa13.8□□□□□ -0.2
LITAF-219ENST00000576334 ZEB2O60315 1214 aa13.8□□□□□ -0.2
LITAF-219ENST00000576334 RGS20O76081 388 aa13.8□□□□□ -0.2
LITAF-219ENST00000576334 NR3C2P08235 984 aa13.8□□□□□ -0.2
LITAF-219ENST00000576334 CYP2C9P11712 490 aa13.8□□□□□ -0.2
LITAF-219ENST00000576334 MYCLP12524 364 aaPredicted RBP13.8□□□□□ -0.2
LITAF-219ENST00000576334 CCL23P55773 120 aa13.8□□□□□ -0.2
LITAF-219ENST00000576334 MFSD5Q6N075 450 aa13.8□□□□□ -0.2
LITAF-219ENST00000576334 FCHSD1Q86WN1 690 aa13.8□□□□□ -0.2
LITAF-219ENST00000576334 RASEFQ8IZ41 740 aa13.8□□□□□ -0.2
LITAF-219ENST00000576334 AFG1LQ8WV93 481 aa13.8□□□□□ -0.2
LITAF-219ENST00000576334 GPKOWQ92917 476 aaPredicted RBP eCLIP13.8□□□□□ -0.2
LITAF-219ENST00000576334 RNPC3Q96LT9 517 aaKnown RBP13.8□□□□□ -0.2
LITAF-219ENST00000576334 BCAS3Q9H6U6 928 aa13.8□□□□□ -0.2
LITAF-219ENST00000576334 A0A0C4DFX4 3053 aa13.8□□□□□ -0.2
LITAF-219ENST00000576334 MROH7Q68CQ1 1323 aa13.8□□□□□ -0.2
LITAF-219ENST00000576334 PRUNE2Q8WUY3 3088 aa13.79□□□□□ -0.2
LITAF-219ENST00000576334 PNMA6FA0A0J9YX94 578 aa13.79□□□□□ -0.2
LITAF-219ENST00000576334 A6NJR5 290 aa13.79□□□□□ -0.2
LITAF-219ENST00000576334 TLR3O15455 904 aaKnown RBP13.79□□□□□ -0.2
LITAF-219ENST00000576334 CABYRO75952 493 aa13.79□□□□□ -0.2
LITAF-219ENST00000576334 MCM5P33992 734 aa13.79□□□□□ -0.2
LITAF-219ENST00000576334 CPT1AP50416 773 aa13.79□□□□□ -0.2
LITAF-219ENST00000576334 ARHGAP1Q07960 439 aa13.79□□□□□ -0.2
LITAF-219ENST00000576334 TTLL4Q14679 1199 aa13.79□□□□□ -0.2
LITAF-219ENST00000576334 STXBP2Q15833 593 aa13.79□□□□□ -0.2
LITAF-219ENST00000576334 NBPF20Q3BBV1 942 aa13.79□□□□□ -0.2
LITAF-219ENST00000576334 ADCK5Q3MIX3 580 aa13.79□□□□□ -0.2
LITAF-219ENST00000576334 CASC1Q6TDU7 716 aa13.79□□□□□ -0.2
LITAF-219ENST00000576334 NFXL1Q6ZNB6 911 aa13.79□□□□□ -0.2
LITAF-219ENST00000576334 CCDC82Q8N4S0 544 aa13.79□□□□□ -0.2
LITAF-219ENST00000576334 SRBD1Q8N5C6 995 aaKnown RBP13.79□□□□□ -0.2
LITAF-219ENST00000576334 CCDC136Q96JN2 1154 aa13.79□□□□□ -0.2
LITAF-219ENST00000576334 GUCD1Q96NT3 240 aa13.79□□□□□ -0.2
LITAF-219ENST00000576334 PDCD2LQ9BRP1 358 aa13.79□□□□□ -0.2
LITAF-219ENST00000576334 NOC4LQ9BVI4 516 aaKnown RBP13.79□□□□□ -0.2
LITAF-219ENST00000576334 WNT8AQ9H1J5 351 aa13.79□□□□□ -0.2
LITAF-219ENST00000576334 ALDH8A1Q9H2A2 487 aaPredicted RBP13.79□□□□□ -0.2
LITAF-219ENST00000576334 UNC80Q8N2C7 3258 aa13.79□□□□□ -0.2
LITAF-219ENST00000576334 SCN10AQ9Y5Y9 1956 aa13.79□□□□□ -0.2
LITAF-219ENST00000576334 SCN5AQ14524 2016 aa13.78□□□□□ -0.2
LITAF-219ENST00000576334 GRXCR1A8MXD5 290 aa13.78□□□□□ -0.2
LITAF-219ENST00000576334 CPA1P15085 419 aa13.78□□□□□ -0.2
LITAF-219ENST00000576334 GHRHRQ02643 423 aa13.78□□□□□ -0.2
LITAF-219ENST00000576334 FAM47CQ5HY64 1035 aa13.78□□□□□ -0.2
LITAF-219ENST00000576334 TMEM240Q5SV17 173 aa13.78□□□□□ -0.2
LITAF-219ENST00000576334 GPR153Q6NV75 609 aa13.78□□□□□ -0.2
LITAF-219ENST00000576334 ZNF365Q70YC5 407 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms