RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 KCNQ2O43526 872 aa19.15■□□□□ 0.66
TOM1L1-221ENST00000575882 LDHBP07195 334 aaKnown RBP19.15■□□□□ 0.66
TOM1L1-221ENST00000575882 EZH2Q15910 746 aaKnown RBP19.15■□□□□ 0.66
TOM1L1-221ENST00000575882 TGFBRAP1Q8WUH2 860 aa19.15■□□□□ 0.66
TOM1L1-221ENST00000575882 SPZ1Q9BXG8 430 aa19.15■□□□□ 0.66
TOM1L1-221ENST00000575882 DEF6Q9H4E7 631 aa19.15■□□□□ 0.66
TOM1L1-221ENST00000575882 GOLGA6BA6NDN3 693 aa19.14■□□□□ 0.65
TOM1L1-221ENST00000575882 EIF4A3P38919 411 aaKnown RBP19.14■□□□□ 0.65
TOM1L1-221ENST00000575882 DIXDC1Q155Q3 683 aa19.14■□□□□ 0.65
TOM1L1-221ENST00000575882 GPIHBP1Q8IV16 184 aa19.14■□□□□ 0.65
TOM1L1-221ENST00000575882 HDAC7Q8WUI4 952 aa19.14■□□□□ 0.65
TOM1L1-221ENST00000575882 MMRN2Q9H8L6 949 aa19.14■□□□□ 0.65
TOM1L1-221ENST00000575882 SAP30BPQ9UHR5 308 aaKnown RBP19.14■□□□□ 0.65
TOM1L1-221ENST00000575882 STRCQ7RTU9 1775 aa19.14■□□□□ 0.65
TOM1L1-221ENST00000575882 RASA1P20936 1047 aa19.14■□□□□ 0.65
TOM1L1-221ENST00000575882 GNA11P29992 359 aa19.14■□□□□ 0.65
TOM1L1-221ENST00000575882 KCNQ4P56696 695 aa19.14■□□□□ 0.65
TOM1L1-221ENST00000575882 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.14■□□□□ 0.65
TOM1L1-221ENST00000575882 POTEDQ86YR6 584 aa19.14■□□□□ 0.65
TOM1L1-221ENST00000575882 TBCKQ8TEA7 893 aa19.14■□□□□ 0.65
TOM1L1-221ENST00000575882 LRRC1Q9BTT6 524 aa19.14■□□□□ 0.65
TOM1L1-221ENST00000575882 PPFIA4O75335 1185 aa19.13■□□□□ 0.65
TOM1L1-221ENST00000575882 SV2BQ7L1I2 683 aa19.13■□□□□ 0.65
TOM1L1-221ENST00000575882 ZNF572Q7Z3I7 529 aaPredicted RBP19.13■□□□□ 0.65
TOM1L1-221ENST00000575882 SPATA4Q8NEY3 305 aa19.13■□□□□ 0.65
TOM1L1-221ENST00000575882 AKR1B10O60218 316 aa19.13■□□□□ 0.65
TOM1L1-221ENST00000575882 TXKP42681 527 aa19.13■□□□□ 0.65
TOM1L1-221ENST00000575882 SOGA3Q5TF21 947 aa19.13■□□□□ 0.65
TOM1L1-221ENST00000575882 NFRKBQ6P4R8 1299 aa19.13■□□□□ 0.65
TOM1L1-221ENST00000575882 SND1Q7KZF4 910 aaKnown RBP eCLIP19.13■□□□□ 0.65
TOM1L1-221ENST00000575882 FAM76AQ8TAV0 307 aa19.13■□□□□ 0.65
TOM1L1-221ENST00000575882 ALS2CR12Q96Q35 445 aa19.13■□□□□ 0.65
TOM1L1-221ENST00000575882 OSBPL9Q96SU4 736 aa19.13■□□□□ 0.65
TOM1L1-221ENST00000575882 DMGDHQ9UI17 866 aaKnown RBP19.13■□□□□ 0.65
TOM1L1-221ENST00000575882 COL5A3P25940 1745 aaPredicted RBP19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 MYMKA6NI61 221 aa19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 LRRC53A6NM62 1247 aa19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 LCA5LO95447 670 aa19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 PRLRP16471 622 aa19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 MATR3P43243 847 aaKnown RBP eCLIP19.12■□□□□ 0.657e-7■■■■■ 27.1
TOM1L1-221ENST00000575882 ITIH3Q06033 890 aa19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 GRB10Q13322 594 aa19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 MAPK8IP2Q13387 824 aaPredicted RBP19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 MAN2A1Q16706 1144 aa19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 USP17L2Q6R6M4 530 aa19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 RRAGAQ7L523 313 aa19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 NBPF5PQ86XG9 351 aaPredicted RBP19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 MAPKAPK5Q8IW41 473 aa19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 RRP36Q96EU6 259 aaKnown RBP19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 PSMB7Q99436 277 aa19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 NYXQ9GZU5 481 aa19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 BIN2Q9UBW5 565 aaPredicted RBP19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 IRS2Q9Y4H2 1338 aa19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 GOLGA6CA6NDK9 693 aa19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 BAG3O95817 575 aa19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 GOLGA6DP0CG33 693 aa19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 MRPS25P82663 173 aaKnown RBP19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 GRIK5Q16478 980 aa19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 UNC13DQ70J99 1090 aa19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 DYMQ7RTS9 669 aa19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 VAT1LQ9HCJ6 419 aa19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 BLOC1S4Q9NUP1 217 aa19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 GOLGA6AQ9NYA3 693 aa19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 SEC63Q9UGP8 760 aaKnown RBP19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 HYOU1Q9Y4L1 999 aa19.12■□□□□ 0.65
TOM1L1-221ENST00000575882 TCP1P17987 556 aaKnown RBP19.11■□□□□ 0.65
TOM1L1-221ENST00000575882 CXCR5P32302 372 aa19.11■□□□□ 0.65
TOM1L1-221ENST00000575882 CCDC84Q86UT8 332 aaPredicted RBP19.11■□□□□ 0.65
TOM1L1-221ENST00000575882 WDR66Q8TBY9 1149 aa19.11■□□□□ 0.65
TOM1L1-221ENST00000575882 SMARCAL1Q9NZC9 954 aa19.11■□□□□ 0.65
TOM1L1-221ENST00000575882 THRAP3Q9Y2W1 955 aaKnown RBP19.11■□□□□ 0.65
TOM1L1-221ENST00000575882 SLC7A5Q01650 507 aa19.11■□□□□ 0.65
TOM1L1-221ENST00000575882 REXO1Q8N1G1 1221 aaKnown RBP19.11■□□□□ 0.65
TOM1L1-221ENST00000575882 SETDB2Q96T68 719 aa19.11■□□□□ 0.65
TOM1L1-221ENST00000575882 EYA3Q99504 573 aa19.11■□□□□ 0.65
TOM1L1-221ENST00000575882 TMEM260Q9NX78 707 aa19.11■□□□□ 0.65
TOM1L1-221ENST00000575882 ERCC3P19447 782 aa19.1■□□□□ 0.65
TOM1L1-221ENST00000575882 GSTO1P78417 241 aa19.1■□□□□ 0.65
TOM1L1-221ENST00000575882 ATP2B2Q01814 1243 aa19.1■□□□□ 0.65
TOM1L1-221ENST00000575882 CCDC181Q5TID7 509 aa19.1■□□□□ 0.65
TOM1L1-221ENST00000575882 RUBCNQ92622 972 aa19.1■□□□□ 0.65
TOM1L1-221ENST00000575882 PNMA5Q96PV4 448 aa19.1■□□□□ 0.65
TOM1L1-221ENST00000575882 PIGSQ96S52 555 aa19.1■□□□□ 0.65
TOM1L1-221ENST00000575882 EHD2Q9NZN4 543 aa19.1■□□□□ 0.65
TOM1L1-221ENST00000575882 STK17AQ9UEE5 414 aa19.1■□□□□ 0.65
TOM1L1-221ENST00000575882 PVALEFA0A1B0GWK0 134 aa19.1■□□□□ 0.65
TOM1L1-221ENST00000575882 ANKRD65E5RJM6 399 aa19.1■□□□□ 0.65
TOM1L1-221ENST00000575882 SHOX2O60902 331 aaPredicted RBP19.1■□□□□ 0.65
TOM1L1-221ENST00000575882 FGFR1OPO95684 399 aaKnown RBP19.1■□□□□ 0.65
TOM1L1-221ENST00000575882 MAGEA1P43355 309 aa19.1■□□□□ 0.65
TOM1L1-221ENST00000575882 GUF1Q8N442 669 aaKnown RBP19.1■□□□□ 0.65
TOM1L1-221ENST00000575882 ANKRD13CQ8N6S4 541 aa19.1■□□□□ 0.65
TOM1L1-221ENST00000575882 LARP4BQ92615 738 aaKnown RBP19.1■□□□□ 0.65
TOM1L1-221ENST00000575882 CDK5RAP3Q96JB5 506 aa19.1■□□□□ 0.65
TOM1L1-221ENST00000575882 SRP68Q9UHB9 627 aaKnown RBP19.1■□□□□ 0.65
TOM1L1-221ENST00000575882 SALL4Q9UJQ4 1053 aa19.1■□□□□ 0.65
TOM1L1-221ENST00000575882 SNED1Q8TER0 1413 aa19.09■□□□□ 0.65
TOM1L1-221ENST00000575882 NCK2O43639 380 aa19.09■□□□□ 0.65
TOM1L1-221ENST00000575882 MAGEA9P43362 315 aa19.09■□□□□ 0.65
TOM1L1-221ENST00000575882 CALCRLQ16602 461 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms