RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 PRDM10Q9NQV6 1147 aa7.39□□□□□ -1.23
SF3B3-214ENST00000572365 CEP131Q9UPN4 1083 aa7.39□□□□□ -1.23
SF3B3-214ENST00000572365 BRCA1P38398 1863 aaKnown RBP7.38□□□□□ -1.23
SF3B3-214ENST00000572365 C4BP0C0L5 1744 aa7.38□□□□□ -1.23
SF3B3-214ENST00000572365 FAM95CA0A1B0GW59 222 aa7.38□□□□□ -1.23
SF3B3-214ENST00000572365 CLEC3AO75596 197 aa7.38□□□□□ -1.23
SF3B3-214ENST00000572365 VEGFAP15692 232 aaPredicted RBP7.38□□□□□ -1.23
SF3B3-214ENST00000572365 CHRNA4P43681 627 aa7.38□□□□□ -1.23
SF3B3-214ENST00000572365 GNPTABQ3T906 1256 aa7.38□□□□□ -1.23
SF3B3-214ENST00000572365 SDE2Q6IQ49 451 aa7.38□□□□□ -1.23
SF3B3-214ENST00000572365 KIAA1211LQ6NV74 962 aa7.38□□□□□ -1.23
SF3B3-214ENST00000572365 LETMD1Q6P1Q0 360 aa7.38□□□□□ -1.23
SF3B3-214ENST00000572365 EEPD1Q7L9B9 569 aa7.38□□□□□ -1.23
SF3B3-214ENST00000572365 CD163Q86VB7 1156 aa7.38□□□□□ -1.23
SF3B3-214ENST00000572365 PPFIBP1Q86W92 1011 aa7.38□□□□□ -1.23
SF3B3-214ENST00000572365 XAGE3Q8WTP9 111 aa7.38□□□□□ -1.23
SF3B3-214ENST00000572365 DCAF5Q96JK2 942 aa7.38□□□□□ -1.23
SF3B3-214ENST00000572365 DNAJC7Q99615 494 aa7.38□□□□□ -1.23
SF3B3-214ENST00000572365 C1GALT1Q9NS00 363 aa7.38□□□□□ -1.23
SF3B3-214ENST00000572365 MRPL42Q9Y6G3 142 aaKnown RBP7.38□□□□□ -1.23
SF3B3-214ENST00000572365 ITGB4P16144 1822 aa7.38□□□□□ -1.23
SF3B3-214ENST00000572365 NFAT5O94916 1531 aa7.37□□□□□ -1.23
SF3B3-214ENST00000572365 PALLDQ8WX93 1383 aa7.37□□□□□ -1.23
SF3B3-214ENST00000572365 ARFGEF1Q9Y6D6 1849 aa7.37□□□□□ -1.23
SF3B3-214ENST00000572365 SLITRK5O94991 958 aa7.37□□□□□ -1.23
SF3B3-214ENST00000572365 TGFB2P61812 414 aa7.37□□□□□ -1.23
SF3B3-214ENST00000572365 IFRD2Q12894 506 aaPredicted RBP7.37□□□□□ -1.23
SF3B3-214ENST00000572365 GRM1Q13255 1194 aa7.37□□□□□ -1.23
SF3B3-214ENST00000572365 SMARCC1Q92922 1105 aaPredicted RBP7.37□□□□□ -1.23
SF3B3-214ENST00000572365 VWCEQ96DN2 955 aa7.37□□□□□ -1.23
SF3B3-214ENST00000572365 RNPC3Q96LT9 517 aaKnown RBP7.37□□□□□ -1.23
SF3B3-214ENST00000572365 MIPEPQ99797 713 aa7.37□□□□□ -1.23
SF3B3-214ENST00000572365 CICQ96RK0 1608 aaPredicted RBP7.37□□□□□ -1.23
SF3B3-214ENST00000572365 KIF13BQ9NQT8 1826 aa7.36□□□□□ -1.23
SF3B3-214ENST00000572365 QRICH2Q9H0J4 1663 aa7.36□□□□□ -1.23
SF3B3-214ENST00000572365 TNRC6CQ9HCJ0 1690 aaKnown RBP7.36□□□□□ -1.23
SF3B3-214ENST00000572365 C9IYK1 514 aa7.36□□□□□ -1.23
SF3B3-214ENST00000572365 DHX15O43143 795 aaKnown RBP7.36□□□□□ -1.23
SF3B3-214ENST00000572365 HSPA8P11142 646 aaKnown RBP7.36□□□□□ -1.23
SF3B3-214ENST00000572365 ITPK1Q13572 414 aa7.36□□□□□ -1.23
SF3B3-214ENST00000572365 MTERF2Q49AM1 385 aa7.36□□□□□ -1.23
SF3B3-214ENST00000572365 DALRD3Q5D0E6 543 aaKnown RBP7.36□□□□□ -1.23
SF3B3-214ENST00000572365 BEND4Q6ZU67 534 aa7.36□□□□□ -1.23
SF3B3-214ENST00000572365 LILRB2Q8N423 598 aa7.36□□□□□ -1.23
SF3B3-214ENST00000572365 RIN3Q8TB24 985 aa7.36□□□□□ -1.23
SF3B3-214ENST00000572365 EPN3Q9H201 632 aa7.36□□□□□ -1.23
SF3B3-214ENST00000572365 LGR6Q9HBX8 967 aa7.36□□□□□ -1.23
SF3B3-214ENST00000572365 PIM2Q9P1W9 311 aa7.36□□□□□ -1.23
SF3B3-214ENST00000572365 CENPJQ9HC77 1338 aaPredicted RBP7.35□□□□□ -1.23
SF3B3-214ENST00000572365 GLTPD2A6NH11 291 aa7.35□□□□□ -1.23
SF3B3-214ENST00000572365 C1QTNF9BB2RNN3 333 aa7.35□□□□□ -1.23
SF3B3-214ENST00000572365 SUSD5O60279 629 aa7.35□□□□□ -1.23
SF3B3-214ENST00000572365 ETV3P41162 512 aa7.35□□□□□ -1.23
SF3B3-214ENST00000572365 ZNF143P52747 638 aaPredicted RBP7.35□□□□□ -1.23
SF3B3-214ENST00000572365 TMF1P82094 1093 aa7.35□□□□□ -1.23
SF3B3-214ENST00000572365 CDK5R2Q13319 367 aa7.35□□□□□ -1.23
SF3B3-214ENST00000572365 NBPF12Q5TAG4 269 aaPredicted RBP7.35□□□□□ -1.23
SF3B3-214ENST00000572365 PAOXQ6QHF9 649 aa7.35□□□□□ -1.23
SF3B3-214ENST00000572365 CLEC10AQ8IUN9 316 aa7.35□□□□□ -1.23
SF3B3-214ENST00000572365 PIGBQ92521 554 aa7.35□□□□□ -1.23
SF3B3-214ENST00000572365 KREMEN1Q96MU8 473 aa7.35□□□□□ -1.23
SF3B3-214ENST00000572365 FAM83CQ9BQN1 747 aa7.35□□□□□ -1.23
SF3B3-214ENST00000572365 KCNF1Q9H3M0 494 aa7.35□□□□□ -1.23
SF3B3-214ENST00000572365 ZMYM5Q9UJ78 669 aa7.35□□□□□ -1.23
SF3B3-214ENST00000572365 VIRMAQ69YN4 1812 aaKnown RBP7.35□□□□□ -1.23
SF3B3-214ENST00000572365 KTN1Q86UP2 1357 aaKnown RBP7.34□□□□□ -1.23
SF3B3-214ENST00000572365 ENPP3O14638 875 aa7.34□□□□□ -1.23
SF3B3-214ENST00000572365 RGS19P49795 217 aa7.34□□□□□ -1.23
SF3B3-214ENST00000572365 RNF4P78317 190 aa7.34□□□□□ -1.23
SF3B3-214ENST00000572365 SLC10A6Q3KNW5 377 aa7.34□□□□□ -1.23
SF3B3-214ENST00000572365 ANKRD39Q53RE8 183 aa7.34□□□□□ -1.23
SF3B3-214ENST00000572365 AXDND1Q5T1B0 1012 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-214ENST00000572365 TDRD10Q5VZ19 366 aaKnown RBP7.34□□□□□ -1.23
SF3B3-214ENST00000572365 CDH24Q86UP0 819 aa7.34□□□□□ -1.23
SF3B3-214ENST00000572365 FBXL18Q96ME1 805 aa7.34□□□□□ -1.23
SF3B3-214ENST00000572365 HAUS7Q99871 368 aa7.34□□□□□ -1.23
SF3B3-214ENST00000572365 DUSP23Q9BVJ7 150 aa7.34□□□□□ -1.23
SF3B3-214ENST00000572365 SUSD2Q9UGT4 822 aa7.34□□□□□ -1.23
SF3B3-214ENST00000572365 ASAP1Q9ULH1 1129 aa7.34□□□□□ -1.23
SF3B3-214ENST00000572365 MEGF6O75095 1541 aa7.33□□□□□ -1.24
SF3B3-214ENST00000572365 ANKRD34BA5PLL1 514 aa7.33□□□□□ -1.24
SF3B3-214ENST00000572365 CBFA2T2O43439 604 aa7.33□□□□□ -1.24
SF3B3-214ENST00000572365 EOMESO95936 686 aa7.33□□□□□ -1.24
SF3B3-214ENST00000572365 TP53P04637 393 aaPredicted RBP7.33□□□□□ -1.24
SF3B3-214ENST00000572365 NFKBIBQ15653 356 aa7.33□□□□□ -1.24
SF3B3-214ENST00000572365 SPATC1Q76KD6 591 aa7.33□□□□□ -1.24
SF3B3-214ENST00000572365 GIMAP7Q8NHV1 300 aa7.33□□□□□ -1.24
SF3B3-214ENST00000572365 SH3TC2Q8TF17 1288 aa7.33□□□□□ -1.24
SF3B3-214ENST00000572365 RNF141Q8WVD5 230 aa7.33□□□□□ -1.24
SF3B3-214ENST00000572365 IP6K1Q92551 441 aa7.33□□□□□ -1.24
SF3B3-214ENST00000572365 GATA6Q92908 595 aa7.33□□□□□ -1.24
SF3B3-214ENST00000572365 ASPNQ9BXN1 380 aa7.33□□□□□ -1.24
SF3B3-214ENST00000572365 SRP68Q9UHB9 627 aaKnown RBP7.33□□□□□ -1.24
SF3B3-214ENST00000572365 CNTNAP1P78357 1384 aa7.33□□□□□ -1.24
SF3B3-214ENST00000572365 PLEKHG2Q9H7P9 1386 aa7.33□□□□□ -1.24
SF3B3-214ENST00000572365 DIAPH1O60610 1272 aaKnown RBP7.32□□□□□ -1.24
SF3B3-214ENST00000572365 EPHX1P07099 455 aa7.32□□□□□ -1.24
SF3B3-214ENST00000572365 NAT2P11245 290 aa7.32□□□□□ -1.24
SF3B3-214ENST00000572365 HSD3B2P26439 372 aa7.32□□□□□ -1.24
SF3B3-214ENST00000572365 AMPHP49418 695 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 368.3 ms