RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 ADAMTS3O15072 1205 aa13.71□□□□□ -0.22
TRIM25-205ENST00000572021 PRPF3O43395 683 aaKnown RBP13.71□□□□□ -0.22
TRIM25-205ENST00000572021 SCG2P13521 617 aa13.71□□□□□ -0.22
TRIM25-205ENST00000572021 PDE4DQ08499 809 aa13.71□□□□□ -0.22
TRIM25-205ENST00000572021 PFKFB3Q16875 520 aaPredicted RBP13.71□□□□□ -0.22
TRIM25-205ENST00000572021 CCDC144BQ3MJ40 725 aa13.71□□□□□ -0.22
TRIM25-205ENST00000572021 ARHGEF16Q5VV41 709 aa13.71□□□□□ -0.22
TRIM25-205ENST00000572021 DNERQ8NFT8 737 aa13.71□□□□□ -0.22
TRIM25-205ENST00000572021 IL31RAQ8NI17 732 aa13.71□□□□□ -0.22
TRIM25-205ENST00000572021 DIS3LQ8TF46 1054 aaKnown RBP13.71□□□□□ -0.22
TRIM25-205ENST00000572021 ABHD16BQ9H3Z7 469 aa13.71□□□□□ -0.22
TRIM25-205ENST00000572021 PSTPIP2Q9H939 334 aa13.71□□□□□ -0.22
TRIM25-205ENST00000572021 PXMP2Q9NR77 195 aa13.71□□□□□ -0.22
TRIM25-205ENST00000572021 MEIS2O14770 477 aa13.7□□□□□ -0.22
TRIM25-205ENST00000572021 ADCYAP1R1P41586 468 aa13.7□□□□□ -0.22
TRIM25-205ENST00000572021 IRX5P78411 483 aaPredicted RBP13.7□□□□□ -0.22
TRIM25-205ENST00000572021 AKAP17AQ02040 695 aaKnown RBP13.7□□□□□ -0.22
TRIM25-205ENST00000572021 GHRHRQ02643 423 aa13.7□□□□□ -0.22
TRIM25-205ENST00000572021 SSRP1Q08945 709 aaKnown RBP13.7□□□□□ -0.22
TRIM25-205ENST00000572021 NBR1Q14596 966 aa13.7□□□□□ -0.22
TRIM25-205ENST00000572021 GJC2Q5T442 439 aaPredicted RBP13.7□□□□□ -0.22
TRIM25-205ENST00000572021 SMARCC2Q8TAQ2 1214 aa13.7□□□□□ -0.22
TRIM25-205ENST00000572021 NSUN6Q8TEA1 469 aaKnown RBP13.7□□□□□ -0.22
TRIM25-205ENST00000572021 AIFM3Q96NN9 605 aa13.7□□□□□ -0.22
TRIM25-205ENST00000572021 CRISPLD2Q9H0B8 497 aa13.7□□□□□ -0.22
TRIM25-205ENST00000572021 BARHL2Q9NY43 387 aa13.7□□□□□ -0.22
TRIM25-205ENST00000572021 DNAH12Q6ZR08 3092 aa13.69□□□□□ -0.22
TRIM25-205ENST00000572021 TNRC18O15417 2968 aaPredicted RBP13.69□□□□□ -0.22
TRIM25-205ENST00000572021 CTDNEP1O95476 244 aa13.69□□□□□ -0.22
TRIM25-205ENST00000572021 MYCLP12524 364 aaPredicted RBP13.69□□□□□ -0.22
TRIM25-205ENST00000572021 EDNRBP24530 442 aa13.69□□□□□ -0.22
TRIM25-205ENST00000572021 ST3GAL1Q11201 340 aa13.69□□□□□ -0.22
TRIM25-205ENST00000572021 RABEP1Q15276 862 aa13.69□□□□□ -0.22
TRIM25-205ENST00000572021 TAPT1Q6NXT6 567 aa13.69□□□□□ -0.22
TRIM25-205ENST00000572021 MORC4Q8TE76 937 aa13.69□□□□□ -0.22
TRIM25-205ENST00000572021 CUL5Q93034 780 aa13.69□□□□□ -0.22
TRIM25-205ENST00000572021 RNF26Q9BY78 433 aaPredicted RBP13.69□□□□□ -0.22
TRIM25-205ENST00000572021 VPS54Q9P1Q0 977 aa13.69□□□□□ -0.22
TRIM25-205ENST00000572021 NRBP1Q9UHY1 535 aa13.69□□□□□ -0.22
TRIM25-205ENST00000572021 OGDHLQ9ULD0 1010 aa13.69□□□□□ -0.22
TRIM25-205ENST00000572021 SMCO2A6NFE2 343 aa13.68□□□□□ -0.22
TRIM25-205ENST00000572021 CD2BP2O95400 341 aaKnown RBP13.68□□□□□ -0.22
TRIM25-205ENST00000572021 PGK1P00558 417 aa13.68□□□□□ -0.22
TRIM25-205ENST00000572021 NR3C2P08235 984 aa13.68□□□□□ -0.22
TRIM25-205ENST00000572021 AKR1A1P14550 325 aa13.68□□□□□ -0.22
TRIM25-205ENST00000572021 ADCY7P51828 1080 aa13.68□□□□□ -0.22
TRIM25-205ENST00000572021 TRIM22Q8IYM9 498 aa13.68□□□□□ -0.22
TRIM25-205ENST00000572021 GTF3C6Q969F1 213 aa13.68□□□□□ -0.22
TRIM25-205ENST00000572021 PGBD1Q96JS3 809 aa13.68□□□□□ -0.22
TRIM25-205ENST00000572021 PDCD2LQ9BRP1 358 aa13.68□□□□□ -0.22
TRIM25-205ENST00000572021 TMEM260Q9NX78 707 aa13.68□□□□□ -0.22
TRIM25-205ENST00000572021 FAM184BQ9ULE4 1060 aa13.68□□□□□ -0.22
TRIM25-205ENST00000572021 LIMCH1Q9UPQ0 1083 aa13.68□□□□□ -0.22
TRIM25-205ENST00000572021 FARP2O94887 1054 aaPredicted RBP13.67□□□□□ -0.22
TRIM25-205ENST00000572021 RARBP10826 455 aa13.67□□□□□ -0.22
TRIM25-205ENST00000572021 SMPD1P17405 629 aa13.67□□□□□ -0.22
TRIM25-205ENST00000572021 MNX1P50219 401 aaPredicted RBP13.67□□□□□ -0.22
TRIM25-205ENST00000572021 PGM5Q15124 567 aa13.67□□□□□ -0.22
TRIM25-205ENST00000572021 CPLX2Q6PUV4 134 aaKnown RBP13.67□□□□□ -0.22
TRIM25-205ENST00000572021 SEPT14Q6ZU15 432 aa13.67□□□□□ -0.22
TRIM25-205ENST00000572021 CCDC83Q8IWF9 413 aa13.67□□□□□ -0.22
TRIM25-205ENST00000572021 RIC8AQ9NPQ8 531 aa13.67□□□□□ -0.22
TRIM25-205ENST00000572021 XPNPEP3Q9NQH7 507 aa13.67□□□□□ -0.22
TRIM25-205ENST00000572021 MAP3K20Q9NYL2 800 aaKnown RBP13.67□□□□□ -0.22
TRIM25-205ENST00000572021 KIAA1217Q5T5P2 1943 aa13.67□□□□□ -0.22
TRIM25-205ENST00000572021 PIK3CDO00329 1044 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 JAK2O60674 1132 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 MSCO60682 206 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 TNFAIP2Q03169 654 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 STXBP2Q15833 593 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 SAMD3Q8N6K7 520 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 IL27Q8NEV9 243 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 PAWRQ96IZ0 340 aaKnown RBP13.66□□□□□ -0.22
TRIM25-205ENST00000572021 IWS1Q96ST2 819 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 MPHOSPH6Q99547 160 aaKnown RBP13.66□□□□□ -0.22
TRIM25-205ENST00000572021 MAF1Q9H063 256 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 VTA1Q9NP79 307 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 GJB4Q9NTQ9 266 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 RBM27Q9P2N5 1060 aaKnown RBP13.66□□□□□ -0.22
TRIM25-205ENST00000572021 MYADML2A6NDP7 307 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 CDKL5O76039 1030 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 FOSBP53539 338 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 NFKBIBQ15653 356 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 JAKMIP3Q5VZ66 844 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 PPP1R18Q6NYC8 613 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 RASGRP4Q8TDF6 673 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 COPS5Q92905 334 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 WDR11Q9BZH6 1224 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 RTEL1Q9NZ71 1219 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 ORC3Q9UBD5 711 aaPredicted RBP13.66□□□□□ -0.22
TRIM25-205ENST00000572021 PCDHA6Q9UN73 950 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 PCDHA8Q9Y5H6 950 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 SYNRGQ9UMZ2 1314 aa13.66□□□□□ -0.22
TRIM25-205ENST00000572021 LOC102724159A0A0B4J2E5 919 aa13.65□□□□□ -0.22
TRIM25-205ENST00000572021 B4DLN1 442 aa13.65□□□□□ -0.22
TRIM25-205ENST00000572021 hCG_1984214I3L0E3 225 aa13.65□□□□□ -0.22
TRIM25-205ENST00000572021 K7ELQ4 463 aaPredicted RBP13.65□□□□□ -0.22
TRIM25-205ENST00000572021 SORBS3O60504 671 aa13.65□□□□□ -0.22
TRIM25-205ENST00000572021 DUSP11O75319 330 aaKnown RBP13.65□□□□□ -0.22
TRIM25-205ENST00000572021 RGS20O76081 388 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms