RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 CDK17Q00537 523 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 PTGISQ16647 500 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 CCDC40Q4G0X9 1142 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 LACTB2Q53H82 288 aaPredicted RBP6.06□□□□□ -1.44
LINC01541-202ENST00000568095 RILPL1Q5EBL4 403 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 IQCEQ6IPM2 695 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 CCDC50Q8IVM0 306 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 GSPT2Q8IYD1 628 aaKnown RBP6.06□□□□□ -1.44
LINC01541-202ENST00000568095 CCDC13Q8IYE1 715 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 CCDC24Q8N4L8 307 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 MAB21L3Q8N8X9 362 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 HELBQ8NG08 1087 aaPredicted RBP6.06□□□□□ -1.44
LINC01541-202ENST00000568095 GIMAP7Q8NHV1 300 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 NKX2-3Q8TAU0 364 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 ZNF507Q8TCN5 953 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 ZNF473Q8WTR7 871 aaKnown RBP6.06□□□□□ -1.44
LINC01541-202ENST00000568095 C7orf43Q8WVR3 580 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 PIK3R5Q8WYR1 880 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 TTYH3Q9C0H2 523 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 PDGFDQ9GZP0 370 aaPredicted RBP6.06□□□□□ -1.44
LINC01541-202ENST00000568095 ACTR5Q9H9F9 607 aaPredicted RBP6.06□□□□□ -1.44
LINC01541-202ENST00000568095 TFCP2L1Q9NZI6 479 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 DDX20Q9UHI6 824 aaKnown RBP6.06□□□□□ -1.44
LINC01541-202ENST00000568095 CAPN11Q9UMQ6 739 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 NDUFAB1O14561 156 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 ENC1O14682 589 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 UQCRFS1P1P0C7P4 283 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 METAP2P50579 478 aaKnown RBP eCLIP6.06□□□□□ -1.44
LINC01541-202ENST00000568095 INHBEP58166 350 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 SPAG1Q07617 926 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 TCP11X2Q5H9J9 407 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 APOA5Q6Q788 366 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 IQCA1Q86XH1 822 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 IGDCC4Q8TDY8 1250 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 ATP6V0A4Q9HBG4 840 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 SLC40A1Q9NP59 571 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 MYH1P12882 1939 aa6.06□□□□□ -1.44
LINC01541-202ENST00000568095 C5orf60A6NFR6 353 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 KIAA0754O94854 1291 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 FAM107AO95990 144 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 CDC25AP30304 524 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 ABL2P42684 1182 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 BCAMP50895 628 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 TSR1Q2NL82 804 aaKnown RBP6.05□□□□□ -1.44
LINC01541-202ENST00000568095 GLE1Q53GS7 698 aaKnown RBP6.05□□□□□ -1.44
LINC01541-202ENST00000568095 SPECC1Q5M775 1068 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 PPP4R3AQ6IN85 833 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 CYB5R4Q7L1T6 521 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 TXNRD3Q86VQ6 643 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 SPATA5Q8NB90 893 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 OR8K1Q8NGG5 319 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 RNPC3Q96LT9 517 aaKnown RBP6.05□□□□□ -1.44
LINC01541-202ENST00000568095 PRM3Q9NNZ6 103 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 GDF3Q9NR23 364 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 ODF2LQ9ULJ1 636 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 GUCA1BQ9UMX6 200 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 SNX12Q9UMY4 172 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 SBF1O95248 1867 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 RCCD1A6NED2 376 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 GRXCR2A6NFK2 248 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 TCF3P15923 654 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 KRT9P35527 623 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 SLC8A3P57103 927 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 KRT83P78385 493 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 IRX1P78414 480 aaPredicted RBP6.05□□□□□ -1.44
LINC01541-202ENST00000568095 PDCLQ13371 301 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 XRCC4Q13426 336 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 UBE3CQ15386 1083 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 NBPF20Q3BBV1 942 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 LRCH2Q5VUJ6 765 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 DEFB132Q7Z7B7 95 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 IRF2BP1Q8IU81 584 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 CCDC170Q8IYT3 715 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 FUKQ8N0W3 1084 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 MYCBPAPQ8TBZ2 947 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 HDAC7Q8WUI4 952 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 N4BP2L2Q92802 583 aaPredicted RBP6.05□□□□□ -1.44
LINC01541-202ENST00000568095 TMEM87BQ96K49 555 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 NEUROD6Q96NK8 337 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 ZIM3Q96PE6 472 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 ANKRD2Q9GZV1 360 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 CSRNP2Q9H175 543 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 LY9Q9HBG7 655 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 DMGDHQ9UI17 866 aaKnown RBP6.05□□□□□ -1.44
LINC01541-202ENST00000568095 TTC26A0AVF1 554 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 ZNF233A6NK53 670 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 ZNF185O15231 689 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 MGRN1O60291 552 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 LCA5LO95447 670 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 MMP10P09238 476 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 IL1R1P14778 569 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 IFNAR1P17181 557 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 KCNA3P22001 575 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 NF2P35240 595 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 RFC5P40937 340 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 LIFRP42702 1097 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 GPSM2P81274 684 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 C2orf54Q08AI8 447 aa6.05□□□□□ -1.44
LINC01541-202ENST00000568095 TTF1Q15361 905 aaPredicted RBP6.05□□□□□ -1.44
LINC01541-202ENST00000568095 HAUS3Q68CZ6 603 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms