RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 PRC1O43663 620 aa17.03■□□□□ 0.32
FANCA-220ENST00000566409 CABYRO75952 493 aa17.03■□□□□ 0.32
FANCA-220ENST00000566409 CFBP00751 764 aa17.03■□□□□ 0.32
FANCA-220ENST00000566409 HSD17B4P51659 736 aa17.03■□□□□ 0.32
FANCA-220ENST00000566409 ITGA7Q13683 1181 aa17.03■□□□□ 0.32
FANCA-220ENST00000566409 GPR153Q6NV75 609 aa17.03■□□□□ 0.32
FANCA-220ENST00000566409 CCDC62Q6P9F0 684 aa17.03■□□□□ 0.32
FANCA-220ENST00000566409 Q7L0L9 218 aa17.03■□□□□ 0.32
FANCA-220ENST00000566409 CATIPQ7Z7H3 387 aa17.03■□□□□ 0.32
FANCA-220ENST00000566409 HOMER1Q86YM7 354 aa17.03■□□□□ 0.32
FANCA-220ENST00000566409 NSUN6Q8TEA1 469 aaKnown RBP17.03■□□□□ 0.32
FANCA-220ENST00000566409 SCFD2Q8WU76 684 aa17.03■□□□□ 0.32
FANCA-220ENST00000566409 RMDN3Q96TC7 470 aa17.03■□□□□ 0.32
FANCA-220ENST00000566409 MYH7BA7E2Y1 1941 aa17.03■□□□□ 0.32
FANCA-220ENST00000566409 SH2B2O14492 632 aaPredicted RBP17.02■□□□□ 0.32
FANCA-220ENST00000566409 TIMP1P01033 207 aa17.02■□□□□ 0.32
FANCA-220ENST00000566409 TXNP10599 105 aaKnown RBP17.02■□□□□ 0.32
FANCA-220ENST00000566409 MCM5P33992 734 aa17.02■□□□□ 0.32
FANCA-220ENST00000566409 ZNF654Q8IZM8 581 aa17.02■□□□□ 0.32
FANCA-220ENST00000566409 OR6J1Q8NGC5 347 aa17.02■□□□□ 0.32
FANCA-220ENST00000566409 MPHOSPH6Q99547 160 aaKnown RBP17.02■□□□□ 0.32
FANCA-220ENST00000566409 MTA3Q9BTC8 594 aa17.02■□□□□ 0.32
FANCA-220ENST00000566409 PNMA6FA0A0J9YX94 578 aa17.01■□□□□ 0.31
FANCA-220ENST00000566409 A6NJR5 290 aa17.01■□□□□ 0.31
FANCA-220ENST00000566409 ZEB2O60315 1214 aa17.01■□□□□ 0.31
FANCA-220ENST00000566409 EIF2AK2P19525 551 aaKnown RBP17.01■□□□□ 0.31
FANCA-220ENST00000566409 HOXA13P31271 388 aaPredicted RBP17.01■□□□□ 0.31
FANCA-220ENST00000566409 PURAQ00577 322 aaKnown RBP17.01■□□□□ 0.31
FANCA-220ENST00000566409 PPP2R5BQ15173 497 aa17.01■□□□□ 0.31
FANCA-220ENST00000566409 SEPT14Q6ZU15 432 aa17.01■□□□□ 0.31
FANCA-220ENST00000566409 C16orf59Q7L2K0 433 aa17.01■□□□□ 0.31
FANCA-220ENST00000566409 IWS1Q96ST2 819 aa17.01■□□□□ 0.31
FANCA-220ENST00000566409 MAP3K14Q99558 947 aa17.01■□□□□ 0.31
FANCA-220ENST00000566409 LRRC2Q9BYS8 371 aa17.01■□□□□ 0.31
FANCA-220ENST00000566409 TRPV6Q9H1D0 765 aa17.01■□□□□ 0.31
FANCA-220ENST00000566409 PXMP2Q9NR77 195 aa17.01■□□□□ 0.31
FANCA-220ENST00000566409 B4DLN1 442 aa17■□□□□ 0.31
FANCA-220ENST00000566409 NKRFO15226 690 aaKnown RBP eCLIP17■□□□□ 0.31
FANCA-220ENST00000566409 NR3C2P08235 984 aa17■□□□□ 0.31
FANCA-220ENST00000566409 MRPL12P52815 198 aaKnown RBP17■□□□□ 0.31
FANCA-220ENST00000566409 FPGSQ05932 587 aa17■□□□□ 0.31
FANCA-220ENST00000566409 TTLL4Q14679 1199 aa17■□□□□ 0.31
FANCA-220ENST00000566409 STXBP2Q15833 593 aa17■□□□□ 0.31
FANCA-220ENST00000566409 LY6KQ17RY6 165 aa17■□□□□ 0.31
FANCA-220ENST00000566409 ARHGEF16Q5VV41 709 aa17■□□□□ 0.31
FANCA-220ENST00000566409 MFSD5Q6N075 450 aa17■□□□□ 0.31
FANCA-220ENST00000566409 CASC1Q6TDU7 716 aa17■□□□□ 0.31
FANCA-220ENST00000566409 RASEFQ8IZ41 740 aa17■□□□□ 0.31
FANCA-220ENST00000566409 PIBF1Q8WXW3 757 aa17■□□□□ 0.31
FANCA-220ENST00000566409 B4GALT4O60513 344 aa16.99■□□□□ 0.31
FANCA-220ENST00000566409 RGS20O76081 388 aa16.99■□□□□ 0.31
FANCA-220ENST00000566409 DDAH1O94760 285 aa16.99■□□□□ 0.31
FANCA-220ENST00000566409 MYL3P08590 195 aa16.99■□□□□ 0.31
FANCA-220ENST00000566409 RXRAP19793 462 aa16.99■□□□□ 0.31
FANCA-220ENST00000566409 LIFRP42702 1097 aa16.99■□□□□ 0.31
FANCA-220ENST00000566409 CPT1AP50416 773 aa16.99■□□□□ 0.31
FANCA-220ENST00000566409 CMTR1Q8N1G2 835 aaKnown RBP16.99■□□□□ 0.31
FANCA-220ENST00000566409 DEFB123Q8N688 67 aa16.99■□□□□ 0.31
FANCA-220ENST00000566409 IL31RAQ8NI17 732 aa16.99■□□□□ 0.31
FANCA-220ENST00000566409 PPP1R13LQ8WUF5 828 aa16.99■□□□□ 0.31
FANCA-220ENST00000566409 CCDC136Q96JN2 1154 aa16.99■□□□□ 0.31
FANCA-220ENST00000566409 TMEM87BQ96K49 555 aa16.99■□□□□ 0.31
FANCA-220ENST00000566409 PDCD2LQ9BRP1 358 aa16.99■□□□□ 0.31
FANCA-220ENST00000566409 PPP1R12CQ9BZL4 782 aa16.99■□□□□ 0.31
FANCA-220ENST00000566409 POLR3EQ9NVU0 708 aa16.99■□□□□ 0.31
FANCA-220ENST00000566409 MAP3K20Q9NYL2 800 aaKnown RBP16.99■□□□□ 0.31
FANCA-220ENST00000566409 UMODL1Q5DID0 1318 aa16.98■□□□□ 0.31
FANCA-220ENST00000566409 TLR3O15455 904 aaKnown RBP16.98■□□□□ 0.31
FANCA-220ENST00000566409 CDC45O75419 566 aa16.98■□□□□ 0.31
FANCA-220ENST00000566409 EIF3JO75822 258 aaKnown RBP16.98■□□□□ 0.31
FANCA-220ENST00000566409 PLEKHA8P1O95397 391 aa16.98■□□□□ 0.31
FANCA-220ENST00000566409 CSF2RAP15509 400 aa16.98■□□□□ 0.31
FANCA-220ENST00000566409 CYP2C18P33260 490 aa16.98■□□□□ 0.31
FANCA-220ENST00000566409 ARHGAP1Q07960 439 aa16.98■□□□□ 0.31
FANCA-220ENST00000566409 ADCK5Q3MIX3 580 aa16.98■□□□□ 0.31
FANCA-220ENST00000566409 RAB11FIP4Q86YS3 637 aa16.98■□□□□ 0.31
FANCA-220ENST00000566409 SRBD1Q8N5C6 995 aaKnown RBP16.98■□□□□ 0.31
FANCA-220ENST00000566409 MTG1Q9BT17 334 aaPredicted RBP16.98■□□□□ 0.31
FANCA-220ENST00000566409 SPZ1Q9BXG8 430 aa16.98■□□□□ 0.31
FANCA-220ENST00000566409 ALDH8A1Q9H2A2 487 aaPredicted RBP16.98■□□□□ 0.31
FANCA-220ENST00000566409 DDX41Q9UJV9 622 aaKnown RBP16.98■□□□□ 0.31
FANCA-220ENST00000566409 SMARCA1P28370 1054 aa16.97■□□□□ 0.31
FANCA-220ENST00000566409 EXOSC10Q01780 885 aaKnown RBP16.97■□□□□ 0.31
FANCA-220ENST00000566409 PGM5Q15124 567 aa16.97■□□□□ 0.31
FANCA-220ENST00000566409 NBPF20Q3BBV1 942 aa16.97■□□□□ 0.31
FANCA-220ENST00000566409 TSGA10IPQ3SY00 556 aa16.97■□□□□ 0.31
FANCA-220ENST00000566409 NFXL1Q6ZNB6 911 aa16.97■□□□□ 0.31
FANCA-220ENST00000566409 VSIG10LQ86VR7 867 aa16.97■□□□□ 0.31
FANCA-220ENST00000566409 TMTC2Q8N394 836 aa16.97■□□□□ 0.31
FANCA-220ENST00000566409 SAMD3Q8N6K7 520 aa16.97■□□□□ 0.31
FANCA-220ENST00000566409 CTCFLQ8NI51 663 aaPredicted RBP16.97■□□□□ 0.31
FANCA-220ENST00000566409 AFG1LQ8WV93 481 aa16.97■□□□□ 0.31
FANCA-220ENST00000566409 ZFP91Q96JP5 570 aaPredicted RBP16.97■□□□□ 0.31
FANCA-220ENST00000566409 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.97■□□□□ 0.31
FANCA-220ENST00000566409 SEZ6LQ9BYH1 1024 aa16.97■□□□□ 0.31
FANCA-220ENST00000566409 TRMT13Q9NUP7 481 aaKnown RBP16.97■□□□□ 0.31
FANCA-220ENST00000566409 MTMR10Q9NXD2 777 aa16.97■□□□□ 0.31
FANCA-220ENST00000566409 CHD9Q3L8U1 2897 aa16.97■□□□□ 0.31
FANCA-220ENST00000566409 A0A0C4DFX4 3053 aa16.96■□□□□ 0.31
FANCA-220ENST00000566409 CCDC69A6NI79 296 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms