RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 TSPY2A6NKD2 308 aa15.07■□□□□ 0
RNF40-208ENST00000565995 NFIBO00712 420 aa15.07■□□□□ 0
RNF40-208ENST00000565995 CENPBP07199 599 aaPredicted RBP15.07■□□□□ 0
RNF40-208ENST00000565995 MYL3P08590 195 aa15.07■□□□□ 0
RNF40-208ENST00000565995 SKIV2LQ15477 1246 aaKnown RBP15.07■□□□□ 0
RNF40-208ENST00000565995 TSHZ3Q63HK5 1081 aa15.07■□□□□ 0
RNF40-208ENST00000565995 RASGRP2Q7LDG7 609 aa15.07■□□□□ 0
RNF40-208ENST00000565995 SESTD1Q86VW0 696 aa15.07■□□□□ 0
RNF40-208ENST00000565995 RETREG2Q8NC44 543 aa15.07■□□□□ 0
RNF40-208ENST00000565995 SCFD2Q8WU76 684 aa15.07■□□□□ 0
RNF40-208ENST00000565995 INCENPQ9NQS7 918 aa15.07■□□□□ 0
RNF40-208ENST00000565995 TCP11L1Q9NUJ3 509 aa15.07■□□□□ 0
RNF40-208ENST00000565995 ISY1Q9ULR0 285 aaKnown RBP15.07■□□□□ 0
RNF40-208ENST00000565995 RAD50Q92878 1312 aa15.07■□□□□ 0
RNF40-208ENST00000565995 PIEZO1Q92508 2521 aa15.07■□□□□ 0
RNF40-208ENST00000565995 TRIOO75962 3097 aa15.06■□□□□ 0
RNF40-208ENST00000565995 CTDSPL2Q05D32 466 aa15.06■□□□□ 0
RNF40-208ENST00000565995 RBL2Q08999 1139 aa15.06■□□□□ 0
RNF40-208ENST00000565995 GRB10Q13322 594 aa15.06■□□□□ 0
RNF40-208ENST00000565995 GPNMBQ14956 572 aa15.06■□□□□ 0
RNF40-208ENST00000565995 ALX1Q15699 326 aa15.06■□□□□ 0
RNF40-208ENST00000565995 SYDE2Q5VT97 1194 aa15.06■□□□□ 0
RNF40-208ENST00000565995 KRT40Q6A162 431 aa15.06■□□□□ 0
RNF40-208ENST00000565995 TTBK2Q6IQ55 1244 aa15.06■□□□□ 0
RNF40-208ENST00000565995 RGS22Q8NE09 1264 aa15.06■□□□□ 0
RNF40-208ENST00000565995 ARNTL2Q8WYA1 636 aa15.06■□□□□ 0
RNF40-208ENST00000565995 CTAGE1Q96RT6 745 aa15.06■□□□□ 0
RNF40-208ENST00000565995 CERS4Q9HA82 394 aa15.06■□□□□ 0
RNF40-208ENST00000565995 PARNO95453 639 aaKnown RBP15.05■□□□□ -0
RNF40-208ENST00000565995 SLC16A2P36021 539 aa15.05■□□□□ -0
RNF40-208ENST00000565995 PPP2R5BQ15173 497 aa15.05■□□□□ -0
RNF40-208ENST00000565995 TMEM31Q5JXX7 168 aa15.05■□□□□ -0
RNF40-208ENST00000565995 RNF207Q6ZRF8 634 aa15.05■□□□□ -0
RNF40-208ENST00000565995 CAGE1Q8TC20 777 aa15.05■□□□□ -0
RNF40-208ENST00000565995 AFAP1L1Q8TED9 768 aa15.05■□□□□ -0
RNF40-208ENST00000565995 CHMP4CQ96CF2 233 aa15.05■□□□□ -0
RNF40-208ENST00000565995 MPHOSPH6Q99547 160 aaKnown RBP15.05■□□□□ -0
RNF40-208ENST00000565995 C11orf16Q9NQ32 467 aa15.05■□□□□ -0
RNF40-208ENST00000565995 WDR19Q8NEZ3 1342 aa15.05■□□□□ -0
RNF40-208ENST00000565995 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.04■□□□□ -0
RNF40-208ENST00000565995 PTPDC1A2A3K4 754 aa15.04■□□□□ -0
RNF40-208ENST00000565995 PI4K2BG5E9Z4 385 aa15.04■□□□□ -0
RNF40-208ENST00000565995 RANBP6O60518 1105 aaKnown RBP15.04■□□□□ -0
RNF40-208ENST00000565995 CXCL10P02778 98 aa15.04■□□□□ -0
RNF40-208ENST00000565995 TOP1P11387 765 aaKnown RBP15.04■□□□□ -0
RNF40-208ENST00000565995 RPS6P62753 249 aaKnown RBP15.04■□□□□ -0
RNF40-208ENST00000565995 PDE4DQ08499 809 aa15.04■□□□□ -0
RNF40-208ENST00000565995 FAM47CQ5HY64 1035 aa15.04■□□□□ -0
RNF40-208ENST00000565995 C20orf194Q5TEA3 1177 aa15.04■□□□□ -0
RNF40-208ENST00000565995 CCDC62Q6P9F0 684 aa15.04■□□□□ -0
RNF40-208ENST00000565995 SLC30A10Q6XR72 485 aa15.04■□□□□ -0
RNF40-208ENST00000565995 TMEM47Q9BQJ4 181 aa15.04■□□□□ -0
RNF40-208ENST00000565995 FTOQ9C0B1 505 aaKnown RBP eCLIP15.04■□□□□ -0
RNF40-208ENST00000565995 RCAN3Q9UKA8 241 aa15.04■□□□□ -0
RNF40-208ENST00000565995 HCN4Q9Y3Q4 1203 aa15.04■□□□□ -0
RNF40-208ENST00000565995 C5orf42Q9H799 3197 aa15.04■□□□□ -0
RNF40-208ENST00000565995 WDFY4Q6ZS81 3184 aa15.04■□□□□ -0
RNF40-208ENST00000565995 B4DLN1 442 aa15.03■□□□□ -0
RNF40-208ENST00000565995 SNHG28P0DPA3 235 aa15.03■□□□□ -0
RNF40-208ENST00000565995 TXNP10599 105 aaKnown RBP15.03■□□□□ -0
RNF40-208ENST00000565995 MRPL12P52815 198 aaKnown RBP15.03■□□□□ -0
RNF40-208ENST00000565995 WDR5P61964 334 aaKnown RBP15.03■□□□□ -0
RNF40-208ENST00000565995 PTGISQ16647 500 aa15.03■□□□□ -0
RNF40-208ENST00000565995 CCDC96Q2M329 555 aa15.03■□□□□ -0
RNF40-208ENST00000565995 TICAM2Q86XR7 235 aa15.03■□□□□ -0
RNF40-208ENST00000565995 CCDC155Q8N6L0 562 aa15.03■□□□□ -0
RNF40-208ENST00000565995 COPS5Q92905 334 aa15.03■□□□□ -0
RNF40-208ENST00000565995 KHSRPQ92945 711 aaKnown RBP eCLIP15.03■□□□□ -0
RNF40-208ENST00000565995 TTC14Q96N46 770 aa15.03■□□□□ -0
RNF40-208ENST00000565995 FSD1Q9BTV5 496 aa15.03■□□□□ -0
RNF40-208ENST00000565995 DOCK5Q9H7D0 1870 aa15.02■□□□□ -0
RNF40-208ENST00000565995 SALL3Q9BXA9 1300 aa15.02■□□□□ -0
RNF40-208ENST00000565995 ARIH2O95376 493 aa15.02■□□□□ -0
RNF40-208ENST00000565995 PDHBP11177 359 aa15.02■□□□□ -0
RNF40-208ENST00000565995 CALML3P27482 149 aa15.02■□□□□ -0
RNF40-208ENST00000565995 ERVK-21P61565 698 aa15.02■□□□□ -0
RNF40-208ENST00000565995 CNKSR3Q6P9H4 555 aa15.02■□□□□ -0
RNF40-208ENST00000565995 SPRED2Q7Z698 418 aa15.02■□□□□ -0
RNF40-208ENST00000565995 KAT2BQ92831 832 aa15.02■□□□□ -0
RNF40-208ENST00000565995 ZMYM6O95789 1325 aa15.01□□□□□ -0.01
RNF40-208ENST00000565995 ABHD14A-ACY1A0A1B0GW23 586 aa15.01□□□□□ -0.01
RNF40-208ENST00000565995 LCHNA4D1U4 455 aa15.01□□□□□ -0.01
RNF40-208ENST00000565995 GJB5O95377 273 aa15.01□□□□□ -0.01
RNF40-208ENST00000565995 SELPP16109 830 aa15.01□□□□□ -0.01
RNF40-208ENST00000565995 KCNJ6P48051 423 aa15.01□□□□□ -0.01
RNF40-208ENST00000565995 ZNF543Q08ER8 600 aa15.01□□□□□ -0.01
RNF40-208ENST00000565995 VPS53Q5VIR6 699 aa15.01□□□□□ -0.01
RNF40-208ENST00000565995 GDF6Q6KF10 455 aaPredicted RBP15.01□□□□□ -0.01
RNF40-208ENST00000565995 PPP1R13LQ8WUF5 828 aa15.01□□□□□ -0.01
RNF40-208ENST00000565995 RAD9AQ99638 391 aa15.01□□□□□ -0.01
RNF40-208ENST00000565995 SUGCTQ9HAC7 445 aa15.01□□□□□ -0.01
RNF40-208ENST00000565995 CD320Q9NPF0 282 aa15.01□□□□□ -0.01
RNF40-208ENST00000565995 EFCAB14O75071 495 aa15□□□□□ -0.01
RNF40-208ENST00000565995 FGAP02671 866 aa15□□□□□ -0.01
RNF40-208ENST00000565995 MMP3P08254 477 aa15□□□□□ -0.01
RNF40-208ENST00000565995 ARHGAP1Q07960 439 aa15□□□□□ -0.01
RNF40-208ENST00000565995 LRRC8DQ7L1W4 858 aa15□□□□□ -0.01
RNF40-208ENST00000565995 DHX38Q92620 1227 aaKnown RBP15□□□□□ -0.01
RNF40-208ENST00000565995 EMID1Q96A84 441 aaPredicted RBP15□□□□□ -0.01
RNF40-208ENST00000565995 GPCPD1Q9NPB8 672 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms