RNA–Protein interactions for RNA: ENST00000563554.1

AC009163.3-201, humanhuman

TSL 3 BASIC

Gene AC009163.3, Length 852 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009163.3-201ENST00000563554 SMCO2A6NFE2 343 aa16.17■□□□□ 0.18
AC009163.3-201ENST00000563554 IGHA2P01877 340 aa16.17■□□□□ 0.18
AC009163.3-201ENST00000563554 CUL4AQ13619 759 aa16.17■□□□□ 0.18
AC009163.3-201ENST00000563554 NPY5RQ15761 445 aa16.17■□□□□ 0.18
AC009163.3-201ENST00000563554 UBE2SQ16763 222 aa16.17■□□□□ 0.18
AC009163.3-201ENST00000563554 USP17L6PQ6QN14 398 aa16.17■□□□□ 0.18
AC009163.3-201ENST00000563554 MAMDC4Q6UXC1 1216 aa16.17■□□□□ 0.18
AC009163.3-201ENST00000563554 MSL3Q8N5Y2 521 aaKnown RBP16.17■□□□□ 0.18
AC009163.3-201ENST00000563554 SNX21Q969T3 373 aa16.17■□□□□ 0.18
AC009163.3-201ENST00000563554 TAAR1Q96RJ0 339 aa16.17■□□□□ 0.18
AC009163.3-201ENST00000563554 RMDN3Q96TC7 470 aa16.17■□□□□ 0.18
AC009163.3-201ENST00000563554 LLPHQ9BRT6 129 aaKnown RBP16.17■□□□□ 0.18
AC009163.3-201ENST00000563554 CNPY2Q9Y2B0 182 aa16.17■□□□□ 0.18
AC009163.3-201ENST00000563554 ALPK3Q96L96 1907 aa16.17■□□□□ 0.18
AC009163.3-201ENST00000563554 KAT6AQ92794 2004 aa16.16■□□□□ 0.18
AC009163.3-201ENST00000563554 ESYT2A0FGR8 921 aa16.16■□□□□ 0.18
AC009163.3-201ENST00000563554 PIK3CDO00329 1044 aa16.16■□□□□ 0.18
AC009163.3-201ENST00000563554 MEIS2O14770 477 aa16.16■□□□□ 0.18
AC009163.3-201ENST00000563554 XBP1P17861 261 aa16.16■□□□□ 0.18
AC009163.3-201ENST00000563554 EIF2AK2P19525 551 aaKnown RBP16.16■□□□□ 0.18
AC009163.3-201ENST00000563554 CACNB2Q08289 660 aaPredicted RBP16.16■□□□□ 0.18
AC009163.3-201ENST00000563554 ARHGEF16Q5VV41 709 aa16.16■□□□□ 0.18
AC009163.3-201ENST00000563554 ABHD8Q96I13 439 aa16.16■□□□□ 0.18
AC009163.3-201ENST00000563554 ALG1Q9BT22 464 aa16.16■□□□□ 0.18
AC009163.3-201ENST00000563554 GLT8D2Q9H1C3 349 aa16.16■□□□□ 0.18
AC009163.3-201ENST00000563554 C6orf50Q9HD87 102 aa16.16■□□□□ 0.18
AC009163.3-201ENST00000563554 RIC8AQ9NPQ8 531 aa16.16■□□□□ 0.18
AC009163.3-201ENST00000563554 SH3GLB2Q9NR46 395 aa16.16■□□□□ 0.18
AC009163.3-201ENST00000563554 PXMP2Q9NR77 195 aa16.16■□□□□ 0.18
AC009163.3-201ENST00000563554 GJB4Q9NTQ9 266 aa16.16■□□□□ 0.18
AC009163.3-201ENST00000563554 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.16■□□□□ 0.18
AC009163.3-201ENST00000563554 ZHX1Q9UKY1 873 aaPredicted RBP16.16■□□□□ 0.18
AC009163.3-201ENST00000563554 LOC102724159A0A0B4J2E5 919 aa16.15■□□□□ 0.18
AC009163.3-201ENST00000563554 SPDYE3A6NKU9 549 aa16.15■□□□□ 0.18
AC009163.3-201ENST00000563554 B4DLN1 442 aa16.15■□□□□ 0.18
AC009163.3-201ENST00000563554 CYBAP13498 195 aa16.15■□□□□ 0.18
AC009163.3-201ENST00000563554 MRPL12P52815 198 aaKnown RBP16.15■□□□□ 0.18
AC009163.3-201ENST00000563554 NLRP5P59047 1200 aa16.15■□□□□ 0.18
AC009163.3-201ENST00000563554 PDE4DQ08499 809 aa16.15■□□□□ 0.18
AC009163.3-201ENST00000563554 PWP2Q15269 919 aaKnown RBP16.15■□□□□ 0.18
AC009163.3-201ENST00000563554 MTFR1Q15390 333 aa16.15■□□□□ 0.18
AC009163.3-201ENST00000563554 SP7Q8TDD2 431 aaPredicted RBP16.15■□□□□ 0.18
AC009163.3-201ENST00000563554 NSUN6Q8TEA1 469 aaKnown RBP16.15■□□□□ 0.18
AC009163.3-201ENST00000563554 ZMYND12Q9H0C1 365 aa16.15■□□□□ 0.18
AC009163.3-201ENST00000563554 UNC93B1Q9H1C4 597 aa16.15■□□□□ 0.18
AC009163.3-201ENST00000563554 HMX1Q9NP08 348 aaPredicted RBP16.15■□□□□ 0.18
AC009163.3-201ENST00000563554 TSHZ2Q9NRE2 1034 aa16.15■□□□□ 0.18
AC009163.3-201ENST00000563554 DDX49Q9Y6V7 483 aaKnown RBP16.15■□□□□ 0.18
AC009163.3-201ENST00000563554 FRMPD4Q14CM0 1322 aa16.15■□□□□ 0.18
AC009163.3-201ENST00000563554 RPTORQ8N122 1335 aa16.15■□□□□ 0.18
AC009163.3-201ENST00000563554 K7ELQ4 463 aaPredicted RBP16.14■□□□□ 0.17
AC009163.3-201ENST00000563554 EDIL3O43854 480 aa16.14■□□□□ 0.17
AC009163.3-201ENST00000563554 CCL5P13501 91 aa16.14■□□□□ 0.17
AC009163.3-201ENST00000563554 CNGA1P29973 690 aa16.14■□□□□ 0.17
AC009163.3-201ENST00000563554 GNA11P29992 359 aa16.14■□□□□ 0.17
AC009163.3-201ENST00000563554 CCND3P30281 292 aaPredicted RBP16.14■□□□□ 0.17
AC009163.3-201ENST00000563554 FOSBP53539 338 aa16.14■□□□□ 0.17
AC009163.3-201ENST00000563554 HMGN5P82970 282 aaKnown RBP16.14■□□□□ 0.17
AC009163.3-201ENST00000563554 MAP3K21Q5TCX8 1036 aa16.14■□□□□ 0.17
AC009163.3-201ENST00000563554 EEPD1Q7L9B9 569 aa16.14■□□□□ 0.17
AC009163.3-201ENST00000563554 HSCBQ8IWL3 235 aa16.14■□□□□ 0.17
AC009163.3-201ENST00000563554 FBXO16Q8IX29 292 aaPredicted RBP16.14■□□□□ 0.17
AC009163.3-201ENST00000563554 REXO1Q8N1G1 1221 aaKnown RBP16.14■□□□□ 0.17
AC009163.3-201ENST00000563554 FAM184AQ8NB25 1140 aa16.14■□□□□ 0.17
AC009163.3-201ENST00000563554 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.14■□□□□ 0.17
AC009163.3-201ENST00000563554 ABHD16BQ9H3Z7 469 aa16.14■□□□□ 0.17
AC009163.3-201ENST00000563554 EHMT1Q9H9B1 1298 aa16.14■□□□□ 0.17
AC009163.3-201ENST00000563554 SNAI1O95863 264 aaPredicted RBP16.13■□□□□ 0.17
AC009163.3-201ENST00000563554 AP3B2Q13367 1082 aa16.13■□□□□ 0.17
AC009163.3-201ENST00000563554 TRIM29Q14134 588 aa16.13■□□□□ 0.17
AC009163.3-201ENST00000563554 PGM5Q15124 567 aa16.13■□□□□ 0.17
AC009163.3-201ENST00000563554 TEX2Q8IWB9 1127 aa16.13■□□□□ 0.17
AC009163.3-201ENST00000563554 FAM177A1Q8N128 213 aaPredicted RBP16.13■□□□□ 0.17
AC009163.3-201ENST00000563554 BICD2Q8TD16 824 aa16.13■□□□□ 0.17
AC009163.3-201ENST00000563554 MORC4Q8TE76 937 aa16.13■□□□□ 0.17
AC009163.3-201ENST00000563554 PGBD1Q96JS3 809 aa16.13■□□□□ 0.17
AC009163.3-201ENST00000563554 IWS1Q96ST2 819 aa16.13■□□□□ 0.17
AC009163.3-201ENST00000563554 PDCD2LQ9BRP1 358 aa16.13■□□□□ 0.17
AC009163.3-201ENST00000563554 RNF208Q9H0X6 261 aa16.13■□□□□ 0.17
AC009163.3-201ENST00000563554 NRBP1Q9UHY1 535 aa16.13■□□□□ 0.17
AC009163.3-201ENST00000563554 MYCLP12524 364 aaPredicted RBP16.12■□□□□ 0.17
AC009163.3-201ENST00000563554 EDNRBP24530 442 aa16.12■□□□□ 0.17
AC009163.3-201ENST00000563554 CCND2P30279 289 aa16.12■□□□□ 0.17
AC009163.3-201ENST00000563554 CLK2P49760 499 aaKnown RBP16.12■□□□□ 0.17
AC009163.3-201ENST00000563554 ACVR2BQ13705 512 aa16.12■□□□□ 0.17
AC009163.3-201ENST00000563554 PRAMEF19Q5SWL8 479 aa16.12■□□□□ 0.17
AC009163.3-201ENST00000563554 JAKMIP3Q5VZ66 844 aa16.12■□□□□ 0.17
AC009163.3-201ENST00000563554 TRPV1Q8NER1 839 aa16.12■□□□□ 0.17
AC009163.3-201ENST00000563554 IL31RAQ8NI17 732 aa16.12■□□□□ 0.17
AC009163.3-201ENST00000563554 PHF20Q9BVI0 1012 aa16.12■□□□□ 0.17
AC009163.3-201ENST00000563554 ANO3Q9BYT9 981 aa16.12■□□□□ 0.17
AC009163.3-201ENST00000563554 VTA1Q9NP79 307 aa16.12■□□□□ 0.17
AC009163.3-201ENST00000563554 TMEM260Q9NX78 707 aa16.12■□□□□ 0.17
AC009163.3-201ENST00000563554 PCDHA6Q9UN73 950 aa16.12■□□□□ 0.17
AC009163.3-201ENST00000563554 KCNJ14Q9UNX9 436 aa16.12■□□□□ 0.17
AC009163.3-201ENST00000563554 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.12■□□□□ 0.17
AC009163.3-201ENST00000563554 PCDHA8Q9Y5H6 950 aa16.12■□□□□ 0.17
AC009163.3-201ENST00000563554 BRCA2P51587 3418 aa16.12■□□□□ 0.17
AC009163.3-201ENST00000563554 FOSP01100 380 aaPredicted RBP16.11■□□□□ 0.17
AC009163.3-201ENST00000563554 NR3C2P08235 984 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms