RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 MAP3K20Q9NYL2 800 aaKnown RBP12.83□□□□□ -0.36
SNX1-212ENST00000560861 NEMFO60524 1076 aa12.82□□□□□ -0.36
SNX1-212ENST00000560861 CCNT1O60563 726 aaKnown RBP12.82□□□□□ -0.36
SNX1-212ENST00000560861 CFBP00751 764 aa12.82□□□□□ -0.36
SNX1-212ENST00000560861 SPRYD7Q5W111 196 aa12.82□□□□□ -0.36
SNX1-212ENST00000560861 FASTKD5Q7L8L6 764 aaKnown RBP12.82□□□□□ -0.36
SNX1-212ENST00000560861 MCF2L2Q86YR7 1114 aa12.82□□□□□ -0.36
SNX1-212ENST00000560861 MB21D1Q8N884 522 aa12.82□□□□□ -0.36
SNX1-212ENST00000560861 SYTL5Q8TDW5 730 aaPredicted RBP12.82□□□□□ -0.36
SNX1-212ENST00000560861 LENG9Q96B70 501 aa12.82□□□□□ -0.36
SNX1-212ENST00000560861 TIGD1Q96MW7 591 aa12.82□□□□□ -0.36
SNX1-212ENST00000560861 TRERF1Q96PN7 1200 aa12.82□□□□□ -0.36
SNX1-212ENST00000560861 NAP1L4Q99733 375 aaKnown RBP12.82□□□□□ -0.36
SNX1-212ENST00000560861 FUCA2Q9BTY2 467 aa12.82□□□□□ -0.36
SNX1-212ENST00000560861 TEX13BQ9BXU2 312 aa12.82□□□□□ -0.36
SNX1-212ENST00000560861 NUP62CLQ9H1M0 184 aa12.82□□□□□ -0.36
SNX1-212ENST00000560861 KCNMB3Q9NPA1 279 aa12.82□□□□□ -0.36
SNX1-212ENST00000560861 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.82□□□□□ -0.36
SNX1-212ENST00000560861 BTBD7Q9P203 1132 aa12.82□□□□□ -0.36
SNX1-212ENST00000560861 IGLV3-22A0A075B6J6 115 aa12.81□□□□□ -0.36
SNX1-212ENST00000560861 VWA3AA6NCI4 1184 aa12.81□□□□□ -0.36
SNX1-212ENST00000560861 SPDYE3A6NKU9 549 aa12.81□□□□□ -0.36
SNX1-212ENST00000560861 ZBTB48P10074 688 aaPredicted RBP12.81□□□□□ -0.36
SNX1-212ENST00000560861 LONP1P36776 959 aaKnown RBP12.81□□□□□ -0.36
SNX1-212ENST00000560861 APLP1P51693 650 aa12.81□□□□□ -0.36
SNX1-212ENST00000560861 Q4G0T1 1027 aa12.81□□□□□ -0.36
SNX1-212ENST00000560861 SPECC1Q5M775 1068 aa12.81□□□□□ -0.36
SNX1-212ENST00000560861 SNRNP48Q6IEG0 339 aaKnown RBP12.81□□□□□ -0.36
SNX1-212ENST00000560861 SLC30A10Q6XR72 485 aa12.81□□□□□ -0.36
SNX1-212ENST00000560861 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.81□□□□□ -0.36
SNX1-212ENST00000560861 GAS2L3Q86XJ1 694 aa12.81□□□□□ -0.36
SNX1-212ENST00000560861 RIOX2Q8IUF8 465 aa12.81□□□□□ -0.36
SNX1-212ENST00000560861 BRI3BPQ8WY22 251 aa12.81□□□□□ -0.36
SNX1-212ENST00000560861 HAS1Q92839 578 aa12.81□□□□□ -0.36
SNX1-212ENST00000560861 KCNH3Q9ULD8 1083 aa12.81□□□□□ -0.36
SNX1-212ENST00000560861 SLC45A1Q9Y2W3 748 aa12.81□□□□□ -0.36
SNX1-212ENST00000560861 LRRC37A2A6NM11 1700 aa12.8□□□□□ -0.36
SNX1-212ENST00000560861 A0A087X0B3 334 aa12.8□□□□□ -0.36
SNX1-212ENST00000560861 SYCE3A1L190 88 aa12.8□□□□□ -0.36
SNX1-212ENST00000560861 FSD2A1L4K1 749 aa12.8□□□□□ -0.36
SNX1-212ENST00000560861 FAM86B1E9PN63 330 aa12.8□□□□□ -0.36
SNX1-212ENST00000560861 ZNF202O95125 648 aa12.8□□□□□ -0.36
SNX1-212ENST00000560861 FAM86B2P0C5J1 330 aa12.8□□□□□ -0.36
SNX1-212ENST00000560861 CETPP11597 493 aa12.8□□□□□ -0.36
SNX1-212ENST00000560861 STAT3P40763 770 aa12.8□□□□□ -0.36
SNX1-212ENST00000560861 SYKP43405 635 aa12.8□□□□□ -0.36
SNX1-212ENST00000560861 FXR2P51116 673 aaKnown RBP eCLIP12.8□□□□□ -0.36
SNX1-212ENST00000560861 HERVK_113P62684 666 aa12.8□□□□□ -0.36
SNX1-212ENST00000560861 HTRA3P83110 453 aa12.8□□□□□ -0.36
SNX1-212ENST00000560861 GSE1Q14687 1217 aa12.8□□□□□ -0.36
SNX1-212ENST00000560861 FCHSD1Q86WN1 690 aa12.8□□□□□ -0.36
SNX1-212ENST00000560861 ELOA2Q8IYF1 753 aaPredicted RBP12.8□□□□□ -0.36
SNX1-212ENST00000560861 DNAJC5GQ8N7S2 189 aa12.8□□□□□ -0.36
SNX1-212ENST00000560861 IGSF22Q8N9C0 903 aa12.8□□□□□ -0.36
SNX1-212ENST00000560861 SYMPKQ92797 1274 aaKnown RBP12.8□□□□□ -0.36
SNX1-212ENST00000560861 EPSTI1Q96J88 318 aa12.8□□□□□ -0.36
SNX1-212ENST00000560861 RBPJLQ9UBG7 517 aa12.8□□□□□ -0.36
SNX1-212ENST00000560861 DDX25Q9UHL0 483 aaKnown RBP12.8□□□□□ -0.36
SNX1-212ENST00000560861 TESPA1A2RU30 521 aaPredicted RBP12.79□□□□□ -0.36
SNX1-212ENST00000560861 TBX3O15119 743 aa12.79□□□□□ -0.36
SNX1-212ENST00000560861 ACTN4O43707 911 aaKnown RBP12.79□□□□□ -0.36
SNX1-212ENST00000560861 PEX10O60683 326 aa12.79□□□□□ -0.36
SNX1-212ENST00000560861 KINO60870 393 aaKnown RBP12.79□□□□□ -0.36
SNX1-212ENST00000560861 LETM1O95202 739 aaPredicted RBP12.79□□□□□ -0.36
SNX1-212ENST00000560861 GTF2A2P52657 109 aa12.79□□□□□ -0.36
SNX1-212ENST00000560861 RPS6P62753 249 aaKnown RBP12.79□□□□□ -0.36
SNX1-212ENST00000560861 IRX3P78415 501 aaPredicted RBP12.79□□□□□ -0.36
SNX1-212ENST00000560861 FSTL1Q12841 308 aa12.79□□□□□ -0.36
SNX1-212ENST00000560861 PABPC4Q13310 644 aaKnown RBP eCLIP12.79□□□□□ -0.365e-6■□□□□ 10.8
SNX1-212ENST00000560861 E2F4Q16254 413 aa12.79□□□□□ -0.36
SNX1-212ENST00000560861 CALCRLQ16602 461 aa12.79□□□□□ -0.36
SNX1-212ENST00000560861 LRSAM1Q6UWE0 723 aa12.79□□□□□ -0.36
SNX1-212ENST00000560861 DTHD1Q6ZMT9 781 aa12.79□□□□□ -0.36
SNX1-212ENST00000560861 KRBA2Q6ZNG9 492 aa12.79□□□□□ -0.36
SNX1-212ENST00000560861 ANKRD23Q86SG2 305 aa12.79□□□□□ -0.36
SNX1-212ENST00000560861 RASAL3Q86YV0 1011 aa12.79□□□□□ -0.36
SNX1-212ENST00000560861 CHST13Q8NET6 341 aa12.79□□□□□ -0.36
SNX1-212ENST00000560861 IL31RAQ8NI17 732 aa12.79□□□□□ -0.36
SNX1-212ENST00000560861 ETNPPLQ8TBG4 499 aa12.79□□□□□ -0.36
SNX1-212ENST00000560861 CCSER1Q9C0I3 900 aa12.79□□□□□ -0.36
SNX1-212ENST00000560861 ACAD9Q9H845 621 aa12.79□□□□□ -0.36
SNX1-212ENST00000560861 TXNRD2Q9NNW7 524 aa12.79□□□□□ -0.36
SNX1-212ENST00000560861 HOMER2Q9NSB8 354 aa12.79□□□□□ -0.36
SNX1-212ENST00000560861 FAM13BQ9NYF5 915 aa12.79□□□□□ -0.36
SNX1-212ENST00000560861 CTDP1Q9Y5B0 961 aaPredicted RBP12.79□□□□□ -0.36
SNX1-212ENST00000560861 CCL15-CCL14A0A0B4J2E2 113 aa12.78□□□□□ -0.36
SNX1-212ENST00000560861 BTBD19C9JJ37 291 aa12.78□□□□□ -0.36
SNX1-212ENST00000560861 CTAGE5O15320 804 aa12.78□□□□□ -0.36
SNX1-212ENST00000560861 OSBPP22059 807 aa12.78□□□□□ -0.36
SNX1-212ENST00000560861 HUNKP57058 714 aa12.78□□□□□ -0.36
SNX1-212ENST00000560861 SPIRE1Q08AE8 756 aa12.78□□□□□ -0.36
SNX1-212ENST00000560861 BAATQ14032 418 aaPredicted RBP12.78□□□□□ -0.36
SNX1-212ENST00000560861 CCL15Q16663 113 aa12.78□□□□□ -0.36
SNX1-212ENST00000560861 LONRF3Q496Y0 759 aa12.78□□□□□ -0.36
SNX1-212ENST00000560861 RNF207Q6ZRF8 634 aa12.78□□□□□ -0.36
SNX1-212ENST00000560861 SH3RF1Q7Z6J0 888 aa12.78□□□□□ -0.36
SNX1-212ENST00000560861 SAPCD2Q86UD0 394 aa12.78□□□□□ -0.36
SNX1-212ENST00000560861 AK8Q96MA6 479 aa12.78□□□□□ -0.36
SNX1-212ENST00000560861 TAAR1Q96RJ0 339 aa12.78□□□□□ -0.36
SNX1-212ENST00000560861 MMTAG2Q9BU76 263 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms