RNA–Protein interactions for RNA: ENST00000558535.1

IDH3A-206, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-206ENST00000558535 C10orf71Q711Q0 1435 aa7.16□□□□□ -1.26
IDH3A-206ENST00000558535 COL5A3P25940 1745 aaPredicted RBP7.16□□□□□ -1.26
IDH3A-206ENST00000558535 APBB1O00213 710 aa7.16□□□□□ -1.26
IDH3A-206ENST00000558535 PEX14O75381 377 aa7.16□□□□□ -1.26
IDH3A-206ENST00000558535 SKAP2O75563 359 aaPredicted RBP7.16□□□□□ -1.26
IDH3A-206ENST00000558535 ATP6V1G2O95670 118 aa7.16□□□□□ -1.26
IDH3A-206ENST00000558535 RFC4P35249 363 aa7.16□□□□□ -1.26
IDH3A-206ENST00000558535 CDK17Q00537 523 aa7.16□□□□□ -1.26
IDH3A-206ENST00000558535 IKQ13123 557 aaPredicted RBP7.16□□□□□ -1.26
IDH3A-206ENST00000558535 SAFBQ15424 915 aaKnown RBP eCLIP7.16□□□□□ -1.26
IDH3A-206ENST00000558535 TSR1Q2NL82 804 aaKnown RBP7.16□□□□□ -1.26
IDH3A-206ENST00000558535 PI16Q6UXB8 463 aa7.16□□□□□ -1.26
IDH3A-206ENST00000558535 TBC1D9Q6ZT07 1266 aa7.16□□□□□ -1.26
IDH3A-206ENST00000558535 CHD1LQ86WJ1 897 aa7.16□□□□□ -1.26
IDH3A-206ENST00000558535 ERICH1Q86X53 443 aa7.16□□□□□ -1.26
IDH3A-206ENST00000558535 CATSPER2Q96P56 530 aa7.16□□□□□ -1.26
IDH3A-206ENST00000558535 EPN3Q9H201 632 aa7.16□□□□□ -1.26
IDH3A-206ENST00000558535 NOD2Q9HC29 1040 aa7.16□□□□□ -1.26
IDH3A-206ENST00000558535 RMND1Q9NWS8 449 aa7.16□□□□□ -1.26
IDH3A-206ENST00000558535 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.16□□□□□ -1.26
IDH3A-206ENST00000558535 SUCLA2Q9P2R7 463 aaPredicted RBP7.16□□□□□ -1.26
IDH3A-206ENST00000558535 MAFFQ9ULX9 164 aa7.16□□□□□ -1.26
IDH3A-206ENST00000558535 SPO11Q9Y5K1 396 aa7.16□□□□□ -1.26
IDH3A-206ENST00000558535 COMMD3-BMI1R4GMX3 469 aa7.16□□□□□ -1.26
IDH3A-206ENST00000558535 A0A087WZG4 1122 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 HTR3EA5X5Y0 456 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 WFS1O76024 890 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 CHMP4BP1P59074 171 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 C4orf46Q504U0 113 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 PPP1R15BQ5SWA1 713 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 TRIM65Q6PJ69 517 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 CACNA2D4Q7Z3S7 1137 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 PHLDB2Q86SQ0 1253 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 LURAP1LQ8IV03 231 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 SLC43A3Q8NBI5 491 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 EHBP1Q8NDI1 1231 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 SPOCK2Q92563 424 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 IQCDQ96DY2 449 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 NDNQ99608 321 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 CCT7Q99832 543 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 RBM42Q9BTD8 480 aaKnown RBP7.15□□□□□ -1.26
IDH3A-206ENST00000558535 BCL2L13Q9BXK5 485 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 TNMDQ9H2S6 317 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 ZNF304Q9HCX3 659 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 GTF3C4Q9UKN8 822 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 SCAF8Q9UPN6 1271 aaKnown RBP7.15□□□□□ -1.26
IDH3A-206ENST00000558535 FADS3Q9Y5Q0 445 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 COL3A1P02461 1466 aaPredicted RBP7.15□□□□□ -1.26
IDH3A-206ENST00000558535 USP27XA6NNY8 438 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 RNMTO43148 476 aaKnown RBP7.15□□□□□ -1.26
IDH3A-206ENST00000558535 STRNO43815 780 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 HSPA8P11142 646 aaKnown RBP7.15□□□□□ -1.26
IDH3A-206ENST00000558535 LIFRP42702 1097 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 ZNF165P49910 485 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 BASP1P80723 227 aaKnown RBP7.15□□□□□ -1.26
IDH3A-206ENST00000558535 COBLL1Q53SF7 1204 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 FAM228AQ86W67 206 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 NLGN2Q8NFZ4 835 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 DEPTORQ8TB45 409 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 ABHD8Q96I13 439 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 CLIC6Q96NY7 704 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 CFAP45Q9UL16 551 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 C2CD2Q9Y426 696 aa7.15□□□□□ -1.26
IDH3A-206ENST00000558535 SCN11AQ9UI33 1791 aa7.15□□□□□ -1.27
IDH3A-206ENST00000558535 ADCY9O60503 1353 aa7.15□□□□□ -1.27
IDH3A-206ENST00000558535 H0YC42 278 aa7.14□□□□□ -1.27
IDH3A-206ENST00000558535 ANP32DO95626 131 aa7.14□□□□□ -1.27
IDH3A-206ENST00000558535 SYF2O95926 243 aaKnown RBP7.14□□□□□ -1.27
IDH3A-206ENST00000558535 ENPP1P22413 925 aa7.14□□□□□ -1.27
IDH3A-206ENST00000558535 RARSP54136 660 aaKnown RBP7.14□□□□□ -1.27
IDH3A-206ENST00000558535 TPD52P55327 224 aaPredicted RBP7.14□□□□□ -1.27
IDH3A-206ENST00000558535 PDCD4Q53EL6 469 aaKnown RBP7.14□□□□□ -1.27
IDH3A-206ENST00000558535 ALS2CLQ60I27 953 aa7.14□□□□□ -1.27
IDH3A-206ENST00000558535 TBC1D9BQ66K14 1250 aa7.14□□□□□ -1.27
IDH3A-206ENST00000558535 PPP4R3AQ6IN85 833 aa7.14□□□□□ -1.27
IDH3A-206ENST00000558535 HOOK3Q86VS8 718 aa7.14□□□□□ -1.27
IDH3A-206ENST00000558535 TTC30BQ8N4P2 665 aa7.14□□□□□ -1.27
IDH3A-206ENST00000558535 ARFGAP2Q8N6H7 521 aa7.14□□□□□ -1.27
IDH3A-206ENST00000558535 IGSF22Q8N9C0 903 aa7.14□□□□□ -1.27
IDH3A-206ENST00000558535 WDR60Q8WVS4 1066 aa7.14□□□□□ -1.27
IDH3A-206ENST00000558535 L3MBTL3Q96JM7 780 aaPredicted RBP7.14□□□□□ -1.27
IDH3A-206ENST00000558535 RNPC3Q96LT9 517 aaKnown RBP7.14□□□□□ -1.27
IDH3A-206ENST00000558535 OSBPL1AQ9BXW6 950 aa7.14□□□□□ -1.27
IDH3A-206ENST00000558535 KRT82Q9NSB4 513 aa7.14□□□□□ -1.27
IDH3A-206ENST00000558535 TRMT1Q9NXH9 659 aaKnown RBP7.14□□□□□ -1.27
IDH3A-206ENST00000558535 KIAA1468Q9P260 1216 aa7.14□□□□□ -1.27
IDH3A-206ENST00000558535 NOSIPQ9Y314 301 aaKnown RBP7.14□□□□□ -1.27
IDH3A-206ENST00000558535 KIF13BQ9NQT8 1826 aa7.14□□□□□ -1.27
IDH3A-206ENST00000558535 GRIN2DO15399 1336 aa7.14□□□□□ -1.27
IDH3A-206ENST00000558535 USP42Q9H9J4 1324 aaKnown RBP7.14□□□□□ -1.27
IDH3A-206ENST00000558535 MTA2O94776 668 aa7.14□□□□□ -1.27
IDH3A-206ENST00000558535 FAM107AO95990 144 aa7.14□□□□□ -1.27
IDH3A-206ENST00000558535 MMP10P09238 476 aa7.14□□□□□ -1.27
IDH3A-206ENST00000558535 PORP16435 677 aaPredicted RBP7.14□□□□□ -1.27
IDH3A-206ENST00000558535 ZNF268Q14587 947 aaPredicted RBP7.14□□□□□ -1.27
IDH3A-206ENST00000558535 UBE3BQ7Z3V4 1068 aa7.14□□□□□ -1.27
IDH3A-206ENST00000558535 BPHLQ86WA6 291 aaPredicted RBP7.14□□□□□ -1.27
IDH3A-206ENST00000558535 DQX1Q8TE96 717 aaKnown RBP7.14□□□□□ -1.27
IDH3A-206ENST00000558535 GIPC2Q8TF65 315 aa7.14□□□□□ -1.27
IDH3A-206ENST00000558535 SKA1Q96BD8 255 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms