RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 FAAP100Q0VG06 881 aa23.93■■□□□ 1.42
HIF1A-206ENST00000553999 ADCK5Q3MIX3 580 aa23.93■■□□□ 1.42
HIF1A-206ENST00000553999 RNF20Q5VTR2 975 aa23.93■■□□□ 1.42
HIF1A-206ENST00000553999 MICU3Q86XE3 530 aa23.93■■□□□ 1.42
HIF1A-206ENST00000553999 CCDC82Q8N4S0 544 aa23.93■■□□□ 1.42
HIF1A-206ENST00000553999 RIOX1Q9H6W3 641 aa23.93■■□□□ 1.42
HIF1A-206ENST00000553999 BAZ2BQ9UIF8 2168 aaKnown RBP23.93■■□□□ 1.42
HIF1A-206ENST00000553999 TXNP10599 105 aaKnown RBP23.92■■□□□ 1.42
HIF1A-206ENST00000553999 CPA1P15085 419 aa23.92■■□□□ 1.42
HIF1A-206ENST00000553999 RAG1P15918 1043 aa23.92■■□□□ 1.42
HIF1A-206ENST00000553999 C1orf53Q5VUE5 145 aa23.92■■□□□ 1.42
HIF1A-206ENST00000553999 RGS22Q8NE09 1264 aa23.92■■□□□ 1.42
HIF1A-206ENST00000553999 NSUN6Q8TEA1 469 aaKnown RBP23.92■■□□□ 1.42
HIF1A-206ENST00000553999 TMEM87BQ96K49 555 aa23.92■■□□□ 1.42
HIF1A-206ENST00000553999 NEK1Q96PY6 1258 aa23.92■■□□□ 1.42
HIF1A-206ENST00000553999 PPP1R12CQ9BZL4 782 aa23.92■■□□□ 1.42
HIF1A-206ENST00000553999 NAP1L2Q9ULW6 460 aaPredicted RBP23.92■■□□□ 1.42
HIF1A-206ENST00000553999 DNAH12Q6ZR08 3092 aa23.92■■□□□ 1.42
HIF1A-206ENST00000553999 ELP1O95163 1332 aa23.91■■□□□ 1.42
HIF1A-206ENST00000553999 A0A1W2PPC1 479 aa23.91■■□□□ 1.42
HIF1A-206ENST00000553999 B4DLN1 442 aa23.91■■□□□ 1.42
HIF1A-206ENST00000553999 ARVCFO00192 962 aa23.91■■□□□ 1.42
HIF1A-206ENST00000553999 MRPL12P52815 198 aaKnown RBP23.91■■□□□ 1.42
HIF1A-206ENST00000553999 SCFD2Q8WU76 684 aa23.91■■□□□ 1.42
HIF1A-206ENST00000553999 PXMP2Q9NR77 195 aa23.91■■□□□ 1.42
HIF1A-206ENST00000553999 SLC12A7Q9Y666 1083 aa23.91■■□□□ 1.42
HIF1A-206ENST00000553999 PNMA6FA0A0J9YX94 578 aa23.9■■□□□ 1.42
HIF1A-206ENST00000553999 ZEB2O60315 1214 aa23.9■■□□□ 1.42
HIF1A-206ENST00000553999 KIF5BP33176 963 aa23.9■■□□□ 1.42
HIF1A-206ENST00000553999 LY6KQ17RY6 165 aa23.9■■□□□ 1.42
HIF1A-206ENST00000553999 C9orf50Q5SZB4 431 aa23.9■■□□□ 1.42
HIF1A-206ENST00000553999 IL31RAQ8NI17 732 aa23.9■■□□□ 1.42
HIF1A-206ENST00000553999 RBM47A0AV96 593 aaKnown RBP23.89■■□□□ 1.41
HIF1A-206ENST00000553999 HSD17B4P51659 736 aa23.89■■□□□ 1.41
HIF1A-206ENST00000553999 ITGA7Q13683 1181 aa23.89■■□□□ 1.41
HIF1A-206ENST00000553999 TTLL4Q14679 1199 aa23.89■■□□□ 1.41
HIF1A-206ENST00000553999 STXBP2Q15833 593 aa23.89■■□□□ 1.41
HIF1A-206ENST00000553999 ANKRD33Q7Z3H0 272 aa23.89■■□□□ 1.41
HIF1A-206ENST00000553999 SRBD1Q8N5C6 995 aaKnown RBP23.89■■□□□ 1.41
HIF1A-206ENST00000553999 RRP36Q96EU6 259 aaKnown RBP23.89■■□□□ 1.41
HIF1A-206ENST00000553999 LOC102724159A0A0B4J2E5 919 aa23.88■■□□□ 1.41
HIF1A-206ENST00000553999 GCOM1H8Y6P7 765 aaPredicted RBP23.88■■□□□ 1.41
HIF1A-206ENST00000553999 NR3C2P08235 984 aa23.88■■□□□ 1.41
HIF1A-206ENST00000553999 POLR2MP0CAP2 368 aa23.88■■□□□ 1.41
HIF1A-206ENST00000553999 EPHB4P54760 987 aa23.88■■□□□ 1.41
HIF1A-206ENST00000553999 PWP2Q15269 919 aaKnown RBP23.88■■□□□ 1.41
HIF1A-206ENST00000553999 SHHQ15465 462 aa23.88■■□□□ 1.41
HIF1A-206ENST00000553999 SEC63Q9UGP8 760 aaKnown RBP23.88■■□□□ 1.41
HIF1A-206ENST00000553999 RANBP2P49792 3224 aaKnown RBP23.88■■□□□ 1.41
HIF1A-206ENST00000553999 GRIN2DO15399 1336 aa23.87■■□□□ 1.41
HIF1A-206ENST00000553999 KIAA0355O15063 1070 aa23.87■■□□□ 1.41
HIF1A-206ENST00000553999 CDK7P50613 346 aa23.87■■□□□ 1.41
HIF1A-206ENST00000553999 NKX3-2P78367 333 aa23.87■■□□□ 1.41
HIF1A-206ENST00000553999 FAM126BQ8IXS8 530 aa23.87■■□□□ 1.41
HIF1A-206ENST00000553999 TRPV6Q9H1D0 765 aa23.87■■□□□ 1.41
HIF1A-206ENST00000553999 Q9Y3F1 56 aa23.87■■□□□ 1.41
HIF1A-206ENST00000553999 MROH7Q68CQ1 1323 aa23.86■■□□□ 1.41
HIF1A-206ENST00000553999 TLR3O15455 904 aaKnown RBP23.86■■□□□ 1.41
HIF1A-206ENST00000553999 LIFRP42702 1097 aa23.86■■□□□ 1.41
HIF1A-206ENST00000553999 CPT1AP50416 773 aa23.86■■□□□ 1.41
HIF1A-206ENST00000553999 FAM47CQ5HY64 1035 aa23.86■■□□□ 1.41
HIF1A-206ENST00000553999 Q7L0L9 218 aa23.86■■□□□ 1.41
HIF1A-206ENST00000553999 TMTC2Q8N394 836 aa23.86■■□□□ 1.41
HIF1A-206ENST00000553999 AFG1LQ8WV93 481 aa23.86■■□□□ 1.41
HIF1A-206ENST00000553999 JAKMIP1Q96N16 626 aaKnown RBP23.86■■□□□ 1.41
HIF1A-206ENST00000553999 TOX2Q96NM4 488 aa23.86■■□□□ 1.41
HIF1A-206ENST00000553999 PDCD2LQ9BRP1 358 aa23.86■■□□□ 1.41
HIF1A-206ENST00000553999 SPZ1Q9BXG8 430 aa23.86■■□□□ 1.41
HIF1A-206ENST00000553999 TBX21Q9UL17 535 aa23.86■■□□□ 1.41
HIF1A-206ENST00000553999 BRPF3Q9ULD4 1205 aa23.86■■□□□ 1.41
HIF1A-206ENST00000553999 MRVI1Q9Y6F6 885 aa23.86■■□□□ 1.41
HIF1A-206ENST00000553999 CABYRO75952 493 aa23.85■■□□□ 1.41
HIF1A-206ENST00000553999 FGD1P98174 961 aa23.85■■□□□ 1.41
HIF1A-206ENST00000553999 PGM5Q15124 567 aa23.85■■□□□ 1.41
HIF1A-206ENST00000553999 SYNE3Q6ZMZ3 975 aa23.85■■□□□ 1.41
HIF1A-206ENST00000553999 GPKOWQ92917 476 aaPredicted RBP eCLIP23.85■■□□□ 1.41
HIF1A-206ENST00000553999 IWS1Q96ST2 819 aa23.85■■□□□ 1.41
HIF1A-206ENST00000553999 MTA3Q9BTC8 594 aa23.85■■□□□ 1.41
HIF1A-206ENST00000553999 UMODL1Q5DID0 1318 aa23.84■■□□□ 1.41
HIF1A-206ENST00000553999 KLF18A0A0U1RQI7 1052 aa23.84■■□□□ 1.41
HIF1A-206ENST00000553999 B4GALT4O60513 344 aa23.84■■□□□ 1.41
HIF1A-206ENST00000553999 CALM1P0DP23 149 aa23.84■■□□□ 1.41
HIF1A-206ENST00000553999 CALM2P0DP24 149 aa23.84■■□□□ 1.41
HIF1A-206ENST00000553999 CALM3P0DP25 149 aa23.84■■□□□ 1.41
HIF1A-206ENST00000553999 CYP2C18P33260 490 aa23.84■■□□□ 1.41
HIF1A-206ENST00000553999 PURAQ00577 322 aaKnown RBP23.84■■□□□ 1.41
HIF1A-206ENST00000553999 FPGSQ05932 587 aa23.84■■□□□ 1.41
HIF1A-206ENST00000553999 CCDC62Q6P9F0 684 aa23.84■■□□□ 1.41
HIF1A-206ENST00000553999 APOA5Q6Q788 366 aa23.84■■□□□ 1.41
HIF1A-206ENST00000553999 USP17L6PQ6QN14 398 aa23.84■■□□□ 1.41
HIF1A-206ENST00000553999 DHX32Q7L7V1 743 aaKnown RBP23.84■■□□□ 1.41
HIF1A-206ENST00000553999 FANCBQ8NB91 859 aa23.84■■□□□ 1.41
HIF1A-206ENST00000553999 TRMT13Q9NUP7 481 aaKnown RBP23.84■■□□□ 1.41
HIF1A-206ENST00000553999 POLR3EQ9NVU0 708 aa23.84■■□□□ 1.41
HIF1A-206ENST00000553999 NKRFO15226 690 aaKnown RBP eCLIP23.83■■□□□ 1.41
HIF1A-206ENST00000553999 GH1P01241 217 aa23.83■■□□□ 1.41
HIF1A-206ENST00000553999 GNAQP50148 359 aa23.83■■□□□ 1.41
HIF1A-206ENST00000553999 EXOSC10Q01780 885 aaKnown RBP23.83■■□□□ 1.41
HIF1A-206ENST00000553999 BRDTQ58F21 947 aaPredicted RBP23.83■■□□□ 1.41
HIF1A-206ENST00000553999 TMTC3Q6ZXV5 915 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms