RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 NKX2-4Q9H2Z4 354 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 ZNF576Q9H609 170 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 CERS4Q9HA82 394 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 A1CFQ9NQ94 594 aaKnown RBP8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 IL17RBQ9NRM6 502 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 RNF146Q9NTX7 359 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 TBX21Q9UL17 535 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 YBX2Q9Y2T7 364 aaKnown RBP8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 TRANK1O15050 2925 aa8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 PATL2C9JE40 543 aaKnown RBP8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 IGSF3O75054 1194 aa8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 KDM4AO75164 1064 aa8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 ARHGEF15O94989 841 aa8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 TIMP1P01033 207 aa8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 CFHP08603 1231 aa8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 CYP2C9P11712 490 aa8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 BMP3P12645 472 aa8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 IGFBP4P22692 258 aa8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 HAND2P61296 217 aa8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 TNFAIP2Q03169 654 aa8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 RRP12Q5JTH9 1297 aaKnown RBP8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 ZSCAN25Q6NSZ9 544 aa8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 ANKRD33Q7Z3H0 272 aa8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 TMCO2Q7Z6W1 182 aaPredicted RBP8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 PI4K2BQ8TCG2 481 aa8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 COPS5Q92905 334 aa8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 TIFAQ96CG3 184 aa8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 TRERF1Q96PN7 1200 aa8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 FSD1Q9BTV5 496 aa8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 DCTPP1Q9H773 170 aa8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 STX8Q9UNK0 236 aa8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 DIS3Q9Y2L1 958 aaKnown RBP8.13□□□□□ -1.11
PRPF40B-214ENST00000551320 SYNGAP1Q96PV0 1343 aa8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 ARVCFO00192 962 aa8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 NFIBO00712 420 aa8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 SORBS3O60504 671 aa8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 RANBP6O60518 1105 aaKnown RBP8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 DUSP11O75319 330 aaKnown RBP8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 TTLL1O95922 423 aa8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 CLK2P49760 499 aaKnown RBP8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 GJA9P57773 515 aa8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 CCDC96Q2M329 555 aa8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 C1orf53Q5VUE5 145 aa8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 MFSD5Q6N075 450 aa8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 TAPT1Q6NXT6 567 aa8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 TMED8Q6PL24 325 aaPredicted RBP8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 MAMDC4Q6UXC1 1216 aa8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 DEFB128Q7Z7B8 93 aa8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 FAM126BQ8IXS8 530 aa8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 FAM133AQ8N9E0 248 aa8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 NEDD1Q8NHV4 660 aa8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 NUP133Q8WUM0 1156 aa8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 FAM227BQ96M60 508 aa8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 GLT1D1Q96MS3 346 aa8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 NAPBQ9H115 298 aa8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 WNT8AQ9H1J5 351 aa8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 TOMM22Q9NS69 142 aa8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 TRMT13Q9NUP7 481 aaKnown RBP8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 FEM1BQ9UK73 627 aa8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 PRR12Q9ULL5 1215 aa8.12□□□□□ -1.11
PRPF40B-214ENST00000551320 ROBO3Q96MS0 1386 aa8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 MOXD2PA6NHM9 499 aa8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 B4GALT4O60513 344 aa8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 MYL3P08590 195 aa8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 GOLGA8HP0CJ92 632 aa8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 SLC1A4P43007 532 aa8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 STAT2P52630 851 aa8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 TFF2Q03403 129 aa8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 BAATQ14032 418 aaPredicted RBP8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 TTLL4Q14679 1199 aa8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 FSCN1Q16658 493 aaKnown RBP8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 ZMYM1Q5SVZ6 1142 aa8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 SLC30A10Q6XR72 485 aa8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 TLK2Q86UE8 772 aa8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 TBC1D5Q92609 795 aa8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 MKL1Q969V6 931 aa8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 ZKSCAN3Q9BRR0 538 aa8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 TSEN34Q9BSV6 310 aaKnown RBP8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 UPF3AQ9H1J1 476 aaKnown RBP8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 ACAD9Q9H845 621 aa8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 LIMD1Q9UGP4 676 aa8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 CCPG1Q9ULG6 757 aa8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 GNEQ9Y223 722 aaKnown RBP8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 LCTP09848 1927 aa8.11□□□□□ -1.11
PRPF40B-214ENST00000551320 A0A0D9SFI3 127 aa8.1□□□□□ -1.11
PRPF40B-214ENST00000551320 A0A0U1RQG5 324 aaPredicted RBP8.1□□□□□ -1.11
PRPF40B-214ENST00000551320 EPOPA6NHQ4 379 aa8.1□□□□□ -1.11
PRPF40B-214ENST00000551320 TSPY2A6NKD2 308 aa8.1□□□□□ -1.11
PRPF40B-214ENST00000551320 ZBBXA8MT70 800 aa8.1□□□□□ -1.11
PRPF40B-214ENST00000551320 ATP2A1O14983 1001 aa8.1□□□□□ -1.11
PRPF40B-214ENST00000551320 CD4P01730 458 aa8.1□□□□□ -1.11
PRPF40B-214ENST00000551320 NDUFV2P19404 249 aa8.1□□□□□ -1.11
PRPF40B-214ENST00000551320 CALML3P27482 149 aa8.1□□□□□ -1.11
PRPF40B-214ENST00000551320 ITGA7Q13683 1181 aa8.1□□□□□ -1.11
PRPF40B-214ENST00000551320 ANKRD45Q5TZF3 282 aa8.1□□□□□ -1.11
PRPF40B-214ENST00000551320 KIAA1211Q6ZU35 1233 aa8.1□□□□□ -1.11
PRPF40B-214ENST00000551320 ZNF589Q86UQ0 364 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms