RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 KIRREL1Q96J84 757 aa6.92□□□□□ -1.3
SCAF11-214ENST00000550893 KIAA1522Q9P206 1035 aaPredicted RBP6.92□□□□□ -1.3
SCAF11-214ENST00000550893 TMEM59LQ9UK28 342 aa6.92□□□□□ -1.3
SCAF11-214ENST00000550893 NHSQ6T4R5 1651 aa6.92□□□□□ -1.3
SCAF11-214ENST00000550893 TONSLQ96HA7 1378 aa6.92□□□□□ -1.3
SCAF11-214ENST00000550893 USP47Q96K76 1375 aa6.92□□□□□ -1.3
SCAF11-214ENST00000550893 PKD1L3Q7Z443 1732 aa6.91□□□□□ -1.3
SCAF11-214ENST00000550893 CASZ1Q86V15 1759 aa6.91□□□□□ -1.3
SCAF11-214ENST00000550893 ZNF503-AS2A6NEH8 195 aa6.91□□□□□ -1.3
SCAF11-214ENST00000550893 UNCXA6NJT0 531 aa6.91□□□□□ -1.3
SCAF11-214ENST00000550893 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.91□□□□□ -1.3
SCAF11-214ENST00000550893 TNFRSF10CO14798 259 aa6.91□□□□□ -1.3
SCAF11-214ENST00000550893 CCNFP41002 786 aa6.91□□□□□ -1.3
SCAF11-214ENST00000550893 HK2P52789 917 aa6.91□□□□□ -1.3
SCAF11-214ENST00000550893 ERVFC1P60507 584 aa6.91□□□□□ -1.3
SCAF11-214ENST00000550893 CLEC16AQ2KHT3 1053 aa6.91□□□□□ -1.3
SCAF11-214ENST00000550893 NBPF9Q3BBW0 867 aa6.91□□□□□ -1.3
SCAF11-214ENST00000550893 TMEM192Q8IY95 271 aa6.91□□□□□ -1.3
SCAF11-214ENST00000550893 ZNF512BQ96KM6 892 aaPredicted RBP6.91□□□□□ -1.3
SCAF11-214ENST00000550893 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.91□□□□□ -1.3
SCAF11-214ENST00000550893 TRPC5Q9UL62 973 aaPredicted RBP6.91□□□□□ -1.3
SCAF11-214ENST00000550893 ZNRF3Q9ULT6 936 aa6.91□□□□□ -1.3
SCAF11-214ENST00000550893 SPATA31A5Q5VU36 1347 aa6.91□□□□□ -1.3
SCAF11-214ENST00000550893 SPATA31A7Q8IWB4 1347 aa6.91□□□□□ -1.3
SCAF11-214ENST00000550893 BRD4O60885 1362 aaPredicted RBP6.91□□□□□ -1.3
SCAF11-214ENST00000550893 LRP5O75197 1615 aa6.9□□□□□ -1.3
SCAF11-214ENST00000550893 DOT1LQ8TEK3 1739 aa6.9□□□□□ -1.3
SCAF11-214ENST00000550893 CLEC3AO75596 197 aa6.9□□□□□ -1.3
SCAF11-214ENST00000550893 HDLBPQ00341 1268 aaKnown RBP6.9□□□□□ -1.3
SCAF11-214ENST00000550893 RAD51AP2Q09MP3 1159 aa6.9□□□□□ -1.3
SCAF11-214ENST00000550893 NMIQ13287 307 aaPredicted RBP6.9□□□□□ -1.3
SCAF11-214ENST00000550893 SNW1Q13573 536 aaKnown RBP6.9□□□□□ -1.3
SCAF11-214ENST00000550893 CHRNA2Q15822 529 aa6.9□□□□□ -1.3
SCAF11-214ENST00000550893 TMC3Q7Z5M5 1100 aa6.9□□□□□ -1.3
SCAF11-214ENST00000550893 ZNF654Q8IZM8 581 aa6.9□□□□□ -1.3
SCAF11-214ENST00000550893 SLC9A7Q96T83 725 aa6.9□□□□□ -1.3
SCAF11-214ENST00000550893 ASCC2Q9H1I8 757 aaPredicted RBP6.9□□□□□ -1.3
SCAF11-214ENST00000550893 SPATA31A1Q5TZJ5 1347 aa6.9□□□□□ -1.3
SCAF11-214ENST00000550893 TTC21BQ7Z4L5 1316 aa6.9□□□□□ -1.3
SCAF11-214ENST00000550893 EDC4Q6P2E9 1401 aaKnown RBP6.9□□□□□ -1.31
SCAF11-214ENST00000550893 BTAF1O14981 1849 aa6.9□□□□□ -1.31
SCAF11-214ENST00000550893 MAP2P11137 1827 aaKnown RBP6.9□□□□□ -1.31
SCAF11-214ENST00000550893 GLI1P08151 1106 aa6.89□□□□□ -1.31
SCAF11-214ENST00000550893 PAK2Q13177 524 aa6.89□□□□□ -1.31
SCAF11-214ENST00000550893 TMEM67Q5HYA8 995 aa6.89□□□□□ -1.31
SCAF11-214ENST00000550893 C9orf131Q5VYM1 1079 aa6.89□□□□□ -1.31
SCAF11-214ENST00000550893 NGDNQ8NEJ9 315 aaKnown RBP6.89□□□□□ -1.31
SCAF11-214ENST00000550893 ENOX1Q8TC92 643 aaKnown RBP6.89□□□□□ -1.31
SCAF11-214ENST00000550893 SYTL5Q8TDW5 730 aaPredicted RBP6.89□□□□□ -1.31
SCAF11-214ENST00000550893 LIN37Q96GY3 246 aaPredicted RBP6.89□□□□□ -1.31
SCAF11-214ENST00000550893 SLC6A18Q96N87 628 aa6.89□□□□□ -1.31
SCAF11-214ENST00000550893 FERD3LQ96RJ6 166 aa6.89□□□□□ -1.31
SCAF11-214ENST00000550893 HDAC8Q9BY41 377 aa6.89□□□□□ -1.31
SCAF11-214ENST00000550893 BTG4Q9NY30 223 aa6.89□□□□□ -1.31
SCAF11-214ENST00000550893 PPT2Q9UMR5 302 aa6.89□□□□□ -1.31
SCAF11-214ENST00000550893 AATKQ6ZMQ8 1374 aa6.89□□□□□ -1.31
SCAF11-214ENST00000550893 VIRMAQ69YN4 1812 aaKnown RBP6.88□□□□□ -1.31
SCAF11-214ENST00000550893 COL24A1Q17RW2 1714 aa6.88□□□□□ -1.31
SCAF11-214ENST00000550893 NCAPD2Q15021 1401 aa6.88□□□□□ -1.31
SCAF11-214ENST00000550893 EVC2Q86UK5 1308 aa6.88□□□□□ -1.31
SCAF11-214ENST00000550893 ST20-MTHFSA0A0A6YYL1 179 aa6.88□□□□□ -1.31
SCAF11-214ENST00000550893 FAM86C2PA6NEL3 165 aa6.88□□□□□ -1.31
SCAF11-214ENST00000550893 LRRC10BA6NIK2 292 aa6.88□□□□□ -1.31
SCAF11-214ENST00000550893 ZGLP1P0C6A0 271 aa6.88□□□□□ -1.31
SCAF11-214ENST00000550893 ACRP10323 421 aa6.88□□□□□ -1.31
SCAF11-214ENST00000550893 IMPDH2P12268 514 aa6.88□□□□□ -1.31
SCAF11-214ENST00000550893 TEKQ02763 1124 aa6.88□□□□□ -1.31
SCAF11-214ENST00000550893 ZNF648Q5T619 568 aaPredicted RBP6.88□□□□□ -1.31
SCAF11-214ENST00000550893 INTS3Q68E01 1043 aaKnown RBP6.88□□□□□ -1.31
SCAF11-214ENST00000550893 USHBP1Q8N6Y0 703 aa6.88□□□□□ -1.31
SCAF11-214ENST00000550893 CARD11Q9BXL7 1154 aa6.88□□□□□ -1.31
SCAF11-214ENST00000550893 LY75O60449 1722 aa6.87□□□□□ -1.31
SCAF11-214ENST00000550893 BLMP54132 1417 aaPredicted RBP6.87□□□□□ -1.31
SCAF11-214ENST00000550893 CRB1P82279 1406 aa6.87□□□□□ -1.31
SCAF11-214ENST00000550893 KTN1Q86UP2 1357 aaKnown RBP6.87□□□□□ -1.31
SCAF11-214ENST00000550893 CLSPNQ9HAW4 1339 aa6.87□□□□□ -1.31
SCAF11-214ENST00000550893 HPXP02790 462 aa6.87□□□□□ -1.31
SCAF11-214ENST00000550893 RAC2P15153 192 aa6.87□□□□□ -1.31
SCAF11-214ENST00000550893 MLANAQ16655 118 aa6.87□□□□□ -1.31
SCAF11-214ENST00000550893 FBXW10Q5XX13 1052 aa6.87□□□□□ -1.31
SCAF11-214ENST00000550893 ARHGEF25Q86VW2 580 aa6.87□□□□□ -1.31
SCAF11-214ENST00000550893 NME9Q86XW9 330 aa6.87□□□□□ -1.31
SCAF11-214ENST00000550893 NT5DC4Q86YG4 428 aa6.87□□□□□ -1.31
SCAF11-214ENST00000550893 DAGLBQ8NCG7 672 aa6.87□□□□□ -1.31
SCAF11-214ENST00000550893 ABHD4Q8TB40 342 aa6.87□□□□□ -1.31
SCAF11-214ENST00000550893 MYLIPQ8WY64 445 aa6.87□□□□□ -1.31
SCAF11-214ENST00000550893 PRDM14Q9GZV8 571 aa6.87□□□□□ -1.31
SCAF11-214ENST00000550893 SLC12A5Q9H2X9 1139 aa6.87□□□□□ -1.31
SCAF11-214ENST00000550893 SP110Q9HB58 689 aa6.87□□□□□ -1.31
SCAF11-214ENST00000550893 GINM1Q9NU53 330 aa6.87□□□□□ -1.31
SCAF11-214ENST00000550893 FAM53CQ9NYF3 392 aa6.87□□□□□ -1.31
SCAF11-214ENST00000550893 EBF1Q9UH73 591 aa6.87□□□□□ -1.31
SCAF11-214ENST00000550893 ANKRD36BQ8N2N9 1353 aa6.86□□□□□ -1.31
SCAF11-214ENST00000550893 ITGB4P16144 1822 aa6.86□□□□□ -1.31
SCAF11-214ENST00000550893 FARP2O94887 1054 aaPredicted RBP6.86□□□□□ -1.31
SCAF11-214ENST00000550893 PRAMEF1O95521 474 aa6.86□□□□□ -1.31
SCAF11-214ENST00000550893 GCP02774 474 aa6.86□□□□□ -1.31
SCAF11-214ENST00000550893 C8AP07357 584 aa6.86□□□□□ -1.31
SCAF11-214ENST00000550893 TRHRP34981 398 aaPredicted RBP6.86□□□□□ -1.31
SCAF11-214ENST00000550893 ZC3H6P61129 1189 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms