RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 TFRCP02786 760 aaKnown RBP22.04■■□□□ 1.12
DDX55-211ENST00000544429 SCG2P13521 617 aa22.04■■□□□ 1.12
DDX55-211ENST00000544429 AKR1A1P14550 325 aa22.04■■□□□ 1.12
DDX55-211ENST00000544429 ME3Q16798 604 aa22.04■■□□□ 1.12
DDX55-211ENST00000544429 CCDC144BQ3MJ40 725 aa22.04■■□□□ 1.12
DDX55-211ENST00000544429 PHKBQ93100 1093 aa22.04■■□□□ 1.12
DDX55-211ENST00000544429 RBM47A0AV96 593 aaKnown RBP22.03■■□□□ 1.12
DDX55-211ENST00000544429 LARGE1O95461 756 aa22.03■■□□□ 1.12
DDX55-211ENST00000544429 PSTPIP2Q9H939 334 aa22.03■■□□□ 1.12
DDX55-211ENST00000544429 UPF2Q9HAU5 1272 aaKnown RBP22.03■■□□□ 1.12
DDX55-211ENST00000544429 ZHX1Q9UKY1 873 aaPredicted RBP22.03■■□□□ 1.12
DDX55-211ENST00000544429 FAM184BQ9ULE4 1060 aa22.03■■□□□ 1.12
DDX55-211ENST00000544429 NKX3-2P78367 333 aa22.02■■□□□ 1.12
DDX55-211ENST00000544429 STK3Q13188 491 aa22.02■■□□□ 1.12
DDX55-211ENST00000544429 USP17L6PQ6QN14 398 aa22.02■■□□□ 1.12
DDX55-211ENST00000544429 FBXO16Q8IX29 292 aaPredicted RBP22.02■■□□□ 1.12
DDX55-211ENST00000544429 IL27Q8NEV9 243 aa22.02■■□□□ 1.12
DDX55-211ENST00000544429 PDCD2LQ9BRP1 358 aa22.02■■□□□ 1.12
DDX55-211ENST00000544429 SLKQ9H2G2 1235 aaPredicted RBP22.02■■□□□ 1.12
DDX55-211ENST00000544429 ESYT2A0FGR8 921 aa22.01■■□□□ 1.11
DDX55-211ENST00000544429 B4DLN1 442 aa22.01■■□□□ 1.11
DDX55-211ENST00000544429 DUSP11O75319 330 aaKnown RBP22.01■■□□□ 1.11
DDX55-211ENST00000544429 CTDNEP1O95476 244 aa22.01■■□□□ 1.11
DDX55-211ENST00000544429 MRPL12P52815 198 aaKnown RBP22.01■■□□□ 1.11
DDX55-211ENST00000544429 PDE4DQ08499 809 aa22.01■■□□□ 1.11
DDX55-211ENST00000544429 RABEP1Q15276 862 aa22.01■■□□□ 1.11
DDX55-211ENST00000544429 GTF3C6Q969F1 213 aa22.01■■□□□ 1.11
DDX55-211ENST00000544429 MPHOSPH6Q99547 160 aaKnown RBP22.01■■□□□ 1.11
DDX55-211ENST00000544429 RIC8AQ9NPQ8 531 aa22.01■■□□□ 1.11
DDX55-211ENST00000544429 PDGFCQ9NRA1 345 aa22.01■■□□□ 1.11
DDX55-211ENST00000544429 GNEQ9Y223 722 aaKnown RBP22.01■■□□□ 1.11
DDX55-211ENST00000544429 C11orf97A0A1B0GVM6 126 aaPredicted RBP22■■□□□ 1.11
DDX55-211ENST00000544429 ADAMTS4O75173 837 aa22■■□□□ 1.11
DDX55-211ENST00000544429 NR3C2P08235 984 aa22■■□□□ 1.11
DDX55-211ENST00000544429 RARBP10826 455 aa22■■□□□ 1.11
DDX55-211ENST00000544429 COL6A1P12109 1028 aa22■■□□□ 1.11
DDX55-211ENST00000544429 EIF2AK2P19525 551 aaKnown RBP22■■□□□ 1.11
DDX55-211ENST00000544429 ADCYAP1R1P41586 468 aa22■■□□□ 1.11
DDX55-211ENST00000544429 NAPAP54920 295 aa22■■□□□ 1.11
DDX55-211ENST00000544429 ST3GAL1Q11201 340 aa22■■□□□ 1.11
DDX55-211ENST00000544429 PGM5Q15124 567 aa22■■□□□ 1.11
DDX55-211ENST00000544429 ARHGEF16Q5VV41 709 aa22■■□□□ 1.11
DDX55-211ENST00000544429 ANO1Q5XXA6 986 aa22■■□□□ 1.11
DDX55-211ENST00000544429 IQSEC1Q6DN90 963 aa22■■□□□ 1.11
DDX55-211ENST00000544429 EEPD1Q7L9B9 569 aa22■■□□□ 1.11
DDX55-211ENST00000544429 VSIG10LQ86VR7 867 aa22■■□□□ 1.11
DDX55-211ENST00000544429 LENG1Q96BZ8 264 aaPredicted RBP22■■□□□ 1.11
DDX55-211ENST00000544429 SLC26A6Q9BXS9 759 aa22■■□□□ 1.11
DDX55-211ENST00000544429 ZMYND12Q9H0C1 365 aa22■■□□□ 1.11
DDX55-211ENST00000544429 UPF3AQ9H1J1 476 aaKnown RBP22■■□□□ 1.11
DDX55-211ENST00000544429 CPLX1O14810 134 aa21.99■■□□□ 1.11
DDX55-211ENST00000544429 PPFIA3O75145 1194 aa21.99■■□□□ 1.11
DDX55-211ENST00000544429 FARP2O94887 1054 aaPredicted RBP21.99■■□□□ 1.11
DDX55-211ENST00000544429 CLK2P49760 499 aaKnown RBP21.99■■□□□ 1.11
DDX55-211ENST00000544429 STXBP2Q15833 593 aa21.99■■□□□ 1.11
DDX55-211ENST00000544429 FCHSD1Q86WN1 690 aa21.99■■□□□ 1.11
DDX55-211ENST00000544429 IL31RAQ8NI17 732 aa21.99■■□□□ 1.11
DDX55-211ENST00000544429 DIS3LQ8TF46 1054 aaKnown RBP21.99■■□□□ 1.11
DDX55-211ENST00000544429 CUL5Q93034 780 aa21.99■■□□□ 1.11
DDX55-211ENST00000544429 STK36Q9NRP7 1315 aa21.99■■□□□ 1.11
DDX55-211ENST00000544429 DNAH12Q6ZR08 3092 aa21.98■■□□□ 1.11
DDX55-211ENST00000544429 ALPK3Q96L96 1907 aa21.98■■□□□ 1.11
DDX55-211ENST00000544429 DNM1LO00429 736 aa21.98■■□□□ 1.11
DDX55-211ENST00000544429 CTAGE5O15320 804 aa21.98■■□□□ 1.11
DDX55-211ENST00000544429 SMPD1P17405 629 aa21.98■■□□□ 1.11
DDX55-211ENST00000544429 TNFAIP2Q03169 654 aa21.98■■□□□ 1.11
DDX55-211ENST00000544429 SSRP1Q08945 709 aaKnown RBP21.98■■□□□ 1.11
DDX55-211ENST00000544429 TMEM63BQ5T3F8 832 aa21.98■■□□□ 1.11
DDX55-211ENST00000544429 CPLX2Q6PUV4 134 aaKnown RBP21.98■■□□□ 1.11
DDX55-211ENST00000544429 TRIM22Q8IYM9 498 aa21.98■■□□□ 1.11
DDX55-211ENST00000544429 KLHDC9Q8NEP7 349 aa21.98■■□□□ 1.11
DDX55-211ENST00000544429 SMARCC2Q8TAQ2 1214 aa21.98■■□□□ 1.11
DDX55-211ENST00000544429 XPNPEP3Q9NQH7 507 aa21.98■■□□□ 1.11
DDX55-211ENST00000544429 SH3GLB2Q9NR46 395 aa21.98■■□□□ 1.11
DDX55-211ENST00000544429 LIMCH1Q9UPQ0 1083 aa21.98■■□□□ 1.11
DDX55-211ENST00000544429 Q9Y3F1 56 aa21.98■■□□□ 1.11
DDX55-211ENST00000544429 SYNRGQ9UMZ2 1314 aa21.98■■□□□ 1.11
DDX55-211ENST00000544429 SMCO2A6NFE2 343 aa21.97■■□□□ 1.11
DDX55-211ENST00000544429 EIF3JO75822 258 aaKnown RBP21.97■■□□□ 1.11
DDX55-211ENST00000544429 CDKL5O76039 1030 aa21.97■■□□□ 1.11
DDX55-211ENST00000544429 RGS20O76081 388 aa21.97■■□□□ 1.11
DDX55-211ENST00000544429 DEXIO95424 95 aa21.97■■□□□ 1.11
DDX55-211ENST00000544429 CST5P28325 142 aaPredicted RBP21.97■■□□□ 1.11
DDX55-211ENST00000544429 GJA9P57773 515 aa21.97■■□□□ 1.11
DDX55-211ENST00000544429 AKAP17AQ02040 695 aaKnown RBP21.97■■□□□ 1.11
DDX55-211ENST00000544429 LRRC41Q15345 812 aa21.97■■□□□ 1.11
DDX55-211ENST00000544429 UBE2SQ16763 222 aa21.97■■□□□ 1.11
DDX55-211ENST00000544429 DUSP28Q4G0W2 176 aa21.97■■□□□ 1.11
DDX55-211ENST00000544429 CCSAPQ6IQ19 270 aaPredicted RBP21.97■■□□□ 1.11
DDX55-211ENST00000544429 CCDC62Q6P9F0 684 aa21.97■■□□□ 1.11
DDX55-211ENST00000544429 NECAB1Q8N987 351 aa21.97■■□□□ 1.11
DDX55-211ENST00000544429 ARRDC4Q8NCT1 418 aa21.97■■□□□ 1.11
DDX55-211ENST00000544429 PAWRQ96IZ0 340 aaKnown RBP21.97■■□□□ 1.11
DDX55-211ENST00000544429 GLT8D2Q9H1C3 349 aa21.97■■□□□ 1.11
DDX55-211ENST00000544429 PGK1P00558 417 aa21.96■■□□□ 1.11
DDX55-211ENST00000544429 ADCY7P51828 1080 aa21.96■■□□□ 1.11
DDX55-211ENST00000544429 MRPS9P82933 396 aaKnown RBP21.96■■□□□ 1.11
DDX55-211ENST00000544429 PCNX4Q63HM2 1172 aa21.96■■□□□ 1.11
DDX55-211ENST00000544429 NOL8Q76FK4 1167 aaKnown RBP21.96■■□□□ 1.11
DDX55-211ENST00000544429 FAM177A1Q8N128 213 aaPredicted RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms