RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 CAPN7Q9Y6W3 813 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 A0A1W2PQC6 194 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 FOXP4Q8IVH2 680 aaPredicted RBP9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 SRBD1Q8N5C6 995 aaKnown RBP9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 UBL4BQ8N7F7 174 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 PIGSQ96S52 555 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 MAP3K14Q99558 947 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 MINPP1Q9UNW1 487 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 STK24Q9Y6E0 443 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 EXOC3O60645 756 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 PLA2G4AP47712 749 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 NT5C2P49902 561 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 LRRC63Q05C16 580 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 DIXDC1Q155Q3 683 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 EXOC3L4Q17RC7 722 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 DDX12PQ92771 950 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 BICD1Q96G01 975 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 METTL14Q9HCE5 456 aaKnown RBP9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 COL4A3BPQ9Y5P4 624 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 FHOD1Q9Y613 1164 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 PP2D1A8MPX8 630 aa9.02□□□□□ -0.96
PRKAB1-207ENST00000542698 ANKRD65E5RJM6 399 aa9.02□□□□□ -0.96
PRKAB1-207ENST00000542698 ABCB4P21439 1286 aa9.02□□□□□ -0.96
PRKAB1-207ENST00000542698 USP14P54578 494 aa9.02□□□□□ -0.96
PRKAB1-207ENST00000542698 MRPS25P82663 173 aaKnown RBP9.02□□□□□ -0.96
PRKAB1-207ENST00000542698 FAM98CQ17RN3 349 aaKnown RBP9.02□□□□□ -0.96
PRKAB1-207ENST00000542698 PRR16Q569H4 304 aa9.02□□□□□ -0.96
PRKAB1-207ENST00000542698 CLEC4GQ6UXB4 293 aa9.02□□□□□ -0.96
PRKAB1-207ENST00000542698 SPATS2Q86XZ4 545 aaKnown RBP9.02□□□□□ -0.96
PRKAB1-207ENST00000542698 RAB17Q9H0T7 212 aa9.02□□□□□ -0.96
PRKAB1-207ENST00000542698 ADAMTS1Q9UHI8 967 aa9.02□□□□□ -0.96
PRKAB1-207ENST00000542698 LEMD3Q9Y2U8 911 aa9.02□□□□□ -0.96
PRKAB1-207ENST00000542698 BZW2Q9Y6E2 419 aaKnown RBP9.02□□□□□ -0.96
PRKAB1-207ENST00000542698 SALL1Q9NSC2 1324 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 A0A087WUV0 522 aaPredicted RBP9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 GYPCP04921 128 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 NTRK3Q16288 839 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 TXNRD1Q16881 649 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 USH1GQ495M9 461 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 ALS2CLQ60I27 953 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 EMBQ6PCB8 327 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 CROCCP2Q86T23 111 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 EFCAB13Q8IY85 973 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 RDH13Q8NBN7 331 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 COA7Q96BR5 231 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 CAPN11Q9UMQ6 739 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 MED1Q15648 1581 aaPredicted RBP9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 FTCDO95954 541 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 NR2F2P24468 414 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 TOB1P50616 345 aaPredicted RBP9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 IRX3P78415 501 aaPredicted RBP9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 PSMD2Q13200 908 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 PPP2R5EQ16537 467 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 ARHGAP44Q17R89 818 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 DPP8Q6V1X1 898 aaPredicted RBP9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 USP40Q9NVE5 1235 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 STIM2Q9P246 746 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 PRDM4Q9UKN5 801 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 ZBTB21Q9ULJ3 1066 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 PCDHA1Q9Y5I3 950 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 ITIH6Q6UXX5 1313 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 ARHGEF35A5YM69 484 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 EIF3CLB5ME19 914 aaKnown RBP9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 TBC1D8O95759 1140 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 BCRP11274 1271 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 TCP10Q12799 353 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 SEMA3FQ13275 785 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 KCNB1Q14721 858 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 PPP4R3AQ6IN85 833 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 GSTA5Q7RTV2 222 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 TPH2Q8IWU9 490 aa9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 EIF3CQ99613 913 aaKnown RBP9.02□□□□□ -0.97
PRKAB1-207ENST00000542698 BAZ2BQ9UIF8 2168 aaKnown RBP9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 OVOS2A0A0G2JMS6 1433 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 ATP1A1P05023 1023 aaKnown RBP9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 KCNQ4P56696 695 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 PLCB3Q01970 1234 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 ASPRV1Q53RT3 343 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 COG1Q8WTW3 980 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 CPVLQ9H3G5 476 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 SETD1AO15047 1707 aaKnown RBP9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 SLIT1O75093 1534 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 ORC4O43929 436 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 EEF2P13639 858 aaKnown RBP9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 ATP2B4P23634 1241 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 GGCXP38435 758 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 NNTQ13423 1086 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 GPATCH4Q5T3I0 446 aaKnown RBP9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 TRIM65Q6PJ69 517 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 UNC13DQ70J99 1090 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 CCDC50Q8IVM0 306 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 CCDC105Q8IYK2 499 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 SLFN12Q8IYM2 578 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 ADSSL1Q8N142 457 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 OGFOD1Q8N543 542 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 FAM84BQ96KN1 310 aaPredicted RBP9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 TMEM47Q9BQJ4 181 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 CCSER1Q9C0I3 900 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 DPH5Q9H2P9 285 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms