RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 MASP2O00187 686 aa1.75□□□□□ -2.13
COPB1-212ENST00000534771 LAMTOR5O43504 91 aa1.75□□□□□ -2.13
COPB1-212ENST00000534771 GLI4P10075 376 aa1.75□□□□□ -2.13
COPB1-212ENST00000534771 NME1P15531 152 aaKnown RBP1.75□□□□□ -2.13
COPB1-212ENST00000534771 HOXB6P17509 224 aaKnown RBP1.75□□□□□ -2.13
COPB1-212ENST00000534771 BMP5P22003 454 aa1.75□□□□□ -2.13
COPB1-212ENST00000534771 RPL13P26373 211 aaKnown RBP1.75□□□□□ -2.13
COPB1-212ENST00000534771 XPCQ01831 940 aaPredicted RBP1.75□□□□□ -2.13
COPB1-212ENST00000534771 POU4F1Q01851 419 aa1.75□□□□□ -2.13
COPB1-212ENST00000534771 TRIM26Q12899 539 aaPredicted RBP1.75□□□□□ -2.13
COPB1-212ENST00000534771 PSMD2Q13200 908 aa1.75□□□□□ -2.13
COPB1-212ENST00000534771 LRRFIP1Q32MZ4 808 aaKnown RBP1.75□□□□□ -2.13
COPB1-212ENST00000534771 ANKRD39Q53RE8 183 aa1.75□□□□□ -2.13
COPB1-212ENST00000534771 EAPPQ56P03 285 aaPredicted RBP1.75□□□□□ -2.13
COPB1-212ENST00000534771 INTS3Q68E01 1043 aaKnown RBP1.75□□□□□ -2.13
COPB1-212ENST00000534771 OVOS1Q6IE37 1185 aa1.75□□□□□ -2.13
COPB1-212ENST00000534771 FBXL19Q6PCT2 694 aa1.75□□□□□ -2.13
COPB1-212ENST00000534771 NLRC3Q7RTR2 1065 aa1.75□□□□□ -2.13
COPB1-212ENST00000534771 CCDC144CPQ8IYA2 1237 aa1.75□□□□□ -2.13
COPB1-212ENST00000534771 C7orf61Q8IZ16 206 aa1.75□□□□□ -2.13
COPB1-212ENST00000534771 KYQ8NBH2 561 aa1.75□□□□□ -2.13
COPB1-212ENST00000534771 TXNDC5Q8NBS9 432 aaKnown RBP1.75□□□□□ -2.13
COPB1-212ENST00000534771 DDX11Q96FC9 970 aa1.75□□□□□ -2.13
COPB1-212ENST00000534771 DHRS1Q96LJ7 313 aa1.75□□□□□ -2.13
COPB1-212ENST00000534771 SLC6A18Q96N87 628 aa1.75□□□□□ -2.13
COPB1-212ENST00000534771 FCRL3Q96P31 734 aaPredicted RBP1.75□□□□□ -2.13
COPB1-212ENST00000534771 C11orf84Q9BUA3 381 aaPredicted RBP1.75□□□□□ -2.13
COPB1-212ENST00000534771 SRRTQ9BXP5 876 aaKnown RBP1.75□□□□□ -2.13
COPB1-212ENST00000534771 EHMT1Q9H9B1 1298 aa1.75□□□□□ -2.13
COPB1-212ENST00000534771 RXFP1Q9HBX9 757 aa1.75□□□□□ -2.13
COPB1-212ENST00000534771 H0Y8X5 98 aa1.74□□□□□ -2.13
COPB1-212ENST00000534771 DDX3XO00571 662 aaKnown RBP eCLIP1.74□□□□□ -2.135e-24■■■■□ 22.8
COPB1-212ENST00000534771 TNFRSF10CO14798 259 aa1.74□□□□□ -2.13
COPB1-212ENST00000534771 CTSHP09668 335 aa1.74□□□□□ -2.13
COPB1-212ENST00000534771 CYP2C8P10632 490 aa1.74□□□□□ -2.13
COPB1-212ENST00000534771 CDK4P11802 303 aa1.74□□□□□ -2.13
COPB1-212ENST00000534771 GARTP22102 1010 aa1.74□□□□□ -2.13
COPB1-212ENST00000534771 MCM4P33991 863 aa1.74□□□□□ -2.13
COPB1-212ENST00000534771 MCM7P33993 719 aa1.74□□□□□ -2.13
COPB1-212ENST00000534771 CLCQ05315 142 aa1.74□□□□□ -2.13
COPB1-212ENST00000534771 GK5Q6ZS86 529 aa1.74□□□□□ -2.13
COPB1-212ENST00000534771 LZTR1Q8N653 840 aa1.74□□□□□ -2.13
COPB1-212ENST00000534771 TTLL6Q8N841 843 aa1.74□□□□□ -2.13
COPB1-212ENST00000534771 NETO2Q8NC67 525 aa1.74□□□□□ -2.13
COPB1-212ENST00000534771 BRF1Q92994 677 aa1.74□□□□□ -2.13
COPB1-212ENST00000534771 LCORQ96JN0 433 aaPredicted RBP1.74□□□□□ -2.13
COPB1-212ENST00000534771 PTCHD1Q96NR3 888 aa1.74□□□□□ -2.13
COPB1-212ENST00000534771 GORASP1Q9BQQ3 440 aa1.74□□□□□ -2.13
COPB1-212ENST00000534771 CD248Q9HCU0 757 aa1.74□□□□□ -2.13
COPB1-212ENST00000534771 JADE2Q9NQC1 790 aa1.74□□□□□ -2.13
COPB1-212ENST00000534771 PPP4R1LQ9P1A2 415 aa1.74□□□□□ -2.13
COPB1-212ENST00000534771 SUCOQ9UBS9 1254 aaKnown RBP1.74□□□□□ -2.13
COPB1-212ENST00000534771 TESMINQ9Y4I5 508 aa1.74□□□□□ -2.13
COPB1-212ENST00000534771 GTF3C3Q9Y5Q9 886 aa1.74□□□□□ -2.13
COPB1-212ENST00000534771 C9orf118A6NHY6 69 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 C9IYK1 514 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 NARSO43776 548 aaKnown RBP1.73□□□□□ -2.13
COPB1-212ENST00000534771 SORBS3O60504 671 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 GREM1O60565 184 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 CYP1A1P04798 512 aaPredicted RBP1.73□□□□□ -2.13
COPB1-212ENST00000534771 CD247P20963 164 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 THBS2P35442 1172 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 EIF4A3P38919 411 aaKnown RBP1.73□□□□□ -2.13
COPB1-212ENST00000534771 ZNF165P49910 485 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 ZNF445P59923 1031 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 PPP2CBP62714 309 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 PPP2CAP67775 309 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 KRTAP27-1Q3LI81 207 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 CD300LDQ6UXZ3 194 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 ETV3LQ6ZN32 361 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 TMC4Q7Z404 712 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 PLEKHH3Q7Z736 793 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 CIR1Q86X95 450 aaPredicted RBP1.73□□□□□ -2.13
COPB1-212ENST00000534771 REXO1Q8N1G1 1221 aaKnown RBP1.73□□□□□ -2.13
COPB1-212ENST00000534771 ZNF296Q8WUU4 475 aaPredicted RBP1.73□□□□□ -2.13
COPB1-212ENST00000534771 SMARCC1Q92922 1105 aaPredicted RBP1.73□□□□□ -2.13
COPB1-212ENST00000534771 SLC9A7Q96T83 725 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 ARID3AQ99856 593 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 LRRC3Q9BY71 257 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 PDGFDQ9GZP0 370 aaPredicted RBP1.73□□□□□ -2.13
COPB1-212ENST00000534771 CSRNP2Q9H175 543 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 UNKLQ9H9P5 680 aaKnown RBP1.73□□□□□ -2.13
COPB1-212ENST00000534771 GP6Q9HCN6 339 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 KCNQ5Q9NR82 932 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 DIS3Q9Y2L1 958 aaKnown RBP1.73□□□□□ -2.13
COPB1-212ENST00000534771 SF3B6Q9Y3B4 125 aaKnown RBP1.73□□□□□ -2.13
COPB1-212ENST00000534771 RWDD3Q9Y3V2 267 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 TCAF1Q9Y4C2 921 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 SUPT16HQ9Y5B9 1047 aaKnown RBP1.73□□□□□ -2.13
COPB1-212ENST00000534771 DMRT1Q9Y5R6 373 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 IVNS1ABPQ9Y6Y0 642 aa1.73□□□□□ -2.13
COPB1-212ENST00000534771 NOTCH2Q04721 2471 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 A0A087WZG4 1122 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 ANKRD33BA6NCL7 494 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 MUSKO15146 869 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 SHOXO15266 292 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 GPR42O15529 346 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 B4GALT3O60512 393 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 B4GALT4O60513 344 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 PPP1R11O60927 126 aaPredicted RBP1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms