RNA–Protein interactions for RNA: ENST00000534086.1

AP003555.3-201, humanhuman

TSL 4 BASIC

Gene AP003555.3, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.3-201ENST00000534086 BRDTQ58F21 947 aaPredicted RBP20.64■□□□□ 0.89
AP003555.3-201ENST00000534086 MFSD5Q6N075 450 aa20.64■□□□□ 0.89
AP003555.3-201ENST00000534086 IWS1Q96ST2 819 aa20.64■□□□□ 0.89
AP003555.3-201ENST00000534086 RIOX1Q9H6W3 641 aa20.64■□□□□ 0.89
AP003555.3-201ENST00000534086 GPHNQ9NQX3 736 aaPredicted RBP20.64■□□□□ 0.89
AP003555.3-201ENST00000534086 PCDHA1Q9Y5I3 950 aa20.64■□□□□ 0.89
AP003555.3-201ENST00000534086 PPP1R11O60927 126 aaPredicted RBP20.63■□□□□ 0.89
AP003555.3-201ENST00000534086 MYL3P08590 195 aa20.63■□□□□ 0.89
AP003555.3-201ENST00000534086 TRAF1Q13077 416 aa20.63■□□□□ 0.89
AP003555.3-201ENST00000534086 STXBP2Q15833 593 aa20.63■□□□□ 0.89
AP003555.3-201ENST00000534086 ARHGEF16Q5VV41 709 aa20.63■□□□□ 0.89
AP003555.3-201ENST00000534086 HOMER1Q86YM7 354 aa20.63■□□□□ 0.89
AP003555.3-201ENST00000534086 COPS5Q92905 334 aa20.63■□□□□ 0.89
AP003555.3-201ENST00000534086 RNPC3Q96LT9 517 aaKnown RBP20.63■□□□□ 0.89
AP003555.3-201ENST00000534086 PPP1R12CQ9BZL4 782 aa20.63■□□□□ 0.89
AP003555.3-201ENST00000534086 MTMR10Q9NXD2 777 aa20.63■□□□□ 0.89
AP003555.3-201ENST00000534086 OPLAHO14841 1288 aa20.62■□□□□ 0.89
AP003555.3-201ENST00000534086 HSD17B4P51659 736 aa20.62■□□□□ 0.89
AP003555.3-201ENST00000534086 PURAQ00577 322 aaKnown RBP20.62■□□□□ 0.89
AP003555.3-201ENST00000534086 SLC35G1Q2M3R5 365 aa20.62■□□□□ 0.89
AP003555.3-201ENST00000534086 BMP2KLQ5H9B9 411 aa20.62■□□□□ 0.89
AP003555.3-201ENST00000534086 FAM109BQ6ICB4 259 aaPredicted RBP20.62■□□□□ 0.89
AP003555.3-201ENST00000534086 CASC1Q6TDU7 716 aa20.62■□□□□ 0.89
AP003555.3-201ENST00000534086 SEPT14Q6ZU15 432 aa20.62■□□□□ 0.89
AP003555.3-201ENST00000534086 SKAP1Q86WV1 359 aa20.62■□□□□ 0.89
AP003555.3-201ENST00000534086 TMEM199Q8N511 208 aa20.62■□□□□ 0.89
AP003555.3-201ENST00000534086 PIGSQ96S52 555 aa20.62■□□□□ 0.89
AP003555.3-201ENST00000534086 MAP3K20Q9NYL2 800 aaKnown RBP20.62■□□□□ 0.89
AP003555.3-201ENST00000534086 SLC27A2O14975 620 aa20.61■□□□□ 0.89
AP003555.3-201ENST00000534086 ARIH2O95376 493 aa20.61■□□□□ 0.89
AP003555.3-201ENST00000534086 EIF2AK2P19525 551 aaKnown RBP20.61■□□□□ 0.89
AP003555.3-201ENST00000534086 PPIGQ13427 754 aaKnown RBP eCLIP20.61■□□□□ 0.89
AP003555.3-201ENST00000534086 CCDC62Q6P9F0 684 aa20.61■□□□□ 0.89
AP003555.3-201ENST00000534086 MTG1Q9BT17 334 aaPredicted RBP20.61■□□□□ 0.89
AP003555.3-201ENST00000534086 TRPV6Q9H1D0 765 aa20.61■□□□□ 0.89
AP003555.3-201ENST00000534086 ANO2Q9NQ90 1003 aa20.61■□□□□ 0.89
AP003555.3-201ENST00000534086 PXMP2Q9NR77 195 aa20.61■□□□□ 0.89
AP003555.3-201ENST00000534086 COL6A3P12111 3177 aa20.61■□□□□ 0.89
AP003555.3-201ENST00000534086 BAZ2BQ9UIF8 2168 aaKnown RBP20.61■□□□□ 0.89
AP003555.3-201ENST00000534086 PNMA6FA0A0J9YX94 578 aa20.6■□□□□ 0.89
AP003555.3-201ENST00000534086 A6NJR5 290 aa20.6■□□□□ 0.89
AP003555.3-201ENST00000534086 PRC1O43663 620 aa20.6■□□□□ 0.89
AP003555.3-201ENST00000534086 CYTH3O43739 400 aa20.6■□□□□ 0.89
AP003555.3-201ENST00000534086 B4GALT4O60513 344 aa20.6■□□□□ 0.89
AP003555.3-201ENST00000534086 KPNA6O60684 536 aa20.6■□□□□ 0.89
AP003555.3-201ENST00000534086 NR3C2P08235 984 aa20.6■□□□□ 0.89
AP003555.3-201ENST00000534086 CYP2C18P33260 490 aa20.6■□□□□ 0.89
AP003555.3-201ENST00000534086 MCM5P33992 734 aa20.6■□□□□ 0.89
AP003555.3-201ENST00000534086 SMAD3P84022 425 aaKnown RBP20.6■□□□□ 0.89
AP003555.3-201ENST00000534086 GHRHRQ02643 423 aa20.6■□□□□ 0.89
AP003555.3-201ENST00000534086 CREB3L3Q68CJ9 461 aa20.6■□□□□ 0.89
AP003555.3-201ENST00000534086 TMTC2Q8N394 836 aa20.6■□□□□ 0.89
AP003555.3-201ENST00000534086 SAMD3Q8N6K7 520 aa20.6■□□□□ 0.89
AP003555.3-201ENST00000534086 MTA3Q9BTC8 594 aa20.6■□□□□ 0.89
AP003555.3-201ENST00000534086 HIPK3Q9H422 1215 aa20.6■□□□□ 0.89
AP003555.3-201ENST00000534086 LY9Q9HBG7 655 aa20.6■□□□□ 0.89
AP003555.3-201ENST00000534086 EIF3JO75822 258 aaKnown RBP20.59■□□□□ 0.89
AP003555.3-201ENST00000534086 CSF2RAP15509 400 aa20.59■□□□□ 0.89
AP003555.3-201ENST00000534086 NECTIN1Q15223 517 aa20.59■□□□□ 0.89
AP003555.3-201ENST00000534086 LY6KQ17RY6 165 aa20.59■□□□□ 0.89
AP003555.3-201ENST00000534086 ZNF654Q8IZM8 581 aa20.59■□□□□ 0.89
AP003555.3-201ENST00000534086 TMEM87BQ96K49 555 aa20.59■□□□□ 0.89
AP003555.3-201ENST00000534086 MAP3K14Q99558 947 aa20.59■□□□□ 0.89
AP003555.3-201ENST00000534086 ALDH8A1Q9H2A2 487 aaPredicted RBP20.59■□□□□ 0.89
AP003555.3-201ENST00000534086 DDAH1O94760 285 aa20.58■□□□□ 0.89
AP003555.3-201ENST00000534086 GH1P01241 217 aa20.58■□□□□ 0.89
AP003555.3-201ENST00000534086 HOXA13P31271 388 aaPredicted RBP20.58■□□□□ 0.89
AP003555.3-201ENST00000534086 KIF5BP33176 963 aa20.58■□□□□ 0.89
AP003555.3-201ENST00000534086 ZNF697Q5TEC3 545 aa20.58■□□□□ 0.89
AP003555.3-201ENST00000534086 NFXL1Q6ZNB6 911 aa20.58■□□□□ 0.89
AP003555.3-201ENST00000534086 CTCFLQ8NI51 663 aaPredicted RBP20.58■□□□□ 0.89
AP003555.3-201ENST00000534086 PIBF1Q8WXW3 757 aa20.58■□□□□ 0.89
AP003555.3-201ENST00000534086 FAM161BQ96MY7 647 aa20.58■□□□□ 0.89
AP003555.3-201ENST00000534086 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.58■□□□□ 0.89
AP003555.3-201ENST00000534086 CCDC69A6NI79 296 aa20.57■□□□□ 0.88
AP003555.3-201ENST00000534086 GCOM1H8Y6P7 765 aaPredicted RBP20.57■□□□□ 0.88
AP003555.3-201ENST00000534086 SUPT20HL2P0C7V6 817 aa20.57■□□□□ 0.88
AP003555.3-201ENST00000534086 POLR2MP0CAP2 368 aa20.57■□□□□ 0.88
AP003555.3-201ENST00000534086 MYCLP12524 364 aaPredicted RBP20.57■□□□□ 0.88
AP003555.3-201ENST00000534086 NBPF20Q3BBV1 942 aa20.57■□□□□ 0.88
AP003555.3-201ENST00000534086 TMEM240Q5SV17 173 aa20.57■□□□□ 0.88
AP003555.3-201ENST00000534086 C16orf59Q7L2K0 433 aa20.57■□□□□ 0.88
AP003555.3-201ENST00000534086 AFG1LQ8WV93 481 aa20.57■□□□□ 0.88
AP003555.3-201ENST00000534086 PDCD2LQ9BRP1 358 aa20.57■□□□□ 0.88
AP003555.3-201ENST00000534086 MYL10Q9BUA6 226 aa20.57■□□□□ 0.88
AP003555.3-201ENST00000534086 NOC4LQ9BVI4 516 aaKnown RBP20.57■□□□□ 0.88
AP003555.3-201ENST00000534086 STXBP5LQ9Y2K9 1186 aa20.57■□□□□ 0.88
AP003555.3-201ENST00000534086 KIAA1217Q5T5P2 1943 aa20.57■□□□□ 0.88
AP003555.3-201ENST00000534086 SH2B2O14492 632 aaPredicted RBP20.56■□□□□ 0.88
AP003555.3-201ENST00000534086 ACRP10323 421 aa20.56■□□□□ 0.88
AP003555.3-201ENST00000534086 ARHGAP1Q07960 439 aa20.56■□□□□ 0.88
AP003555.3-201ENST00000534086 FAM47CQ5HY64 1035 aa20.56■□□□□ 0.88
AP003555.3-201ENST00000534086 SPZ1Q9BXG8 430 aa20.56■□□□□ 0.88
AP003555.3-201ENST00000534086 IL23AQ9NPF7 189 aa20.56■□□□□ 0.88
AP003555.3-201ENST00000534086 TRMT13Q9NUP7 481 aaKnown RBP20.56■□□□□ 0.88
AP003555.3-201ENST00000534086 DDX41Q9UJV9 622 aaKnown RBP20.56■□□□□ 0.88
AP003555.3-201ENST00000534086 MRVI1Q9Y6F6 885 aa20.56■□□□□ 0.88
AP003555.3-201ENST00000534086 UMODL1Q5DID0 1318 aa20.55■□□□□ 0.88
AP003555.3-201ENST00000534086 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.55■□□□□ 0.88
AP003555.3-201ENST00000534086 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms