RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 GRAMD1CQ8IYS0 662 aa5.39□□□□□ -1.55
C11orf54-213ENST00000533585 MIER2Q8N344 545 aa5.39□□□□□ -1.55
C11orf54-213ENST00000533585 CRACR2BQ8N4Y2 399 aaPredicted RBP5.39□□□□□ -1.55
C11orf54-213ENST00000533585 OR2C3Q8N628 320 aa5.39□□□□□ -1.55
C11orf54-213ENST00000533585 IGSF22Q8N9C0 903 aa5.39□□□□□ -1.55
C11orf54-213ENST00000533585 GPBAR1Q8TDU6 330 aa5.39□□□□□ -1.55
C11orf54-213ENST00000533585 DIS3LQ8TF46 1054 aaKnown RBP5.39□□□□□ -1.55
C11orf54-213ENST00000533585 ELMO3Q96BJ8 720 aa5.39□□□□□ -1.55
C11orf54-213ENST00000533585 TBC1D20Q96BZ9 403 aa5.39□□□□□ -1.55
C11orf54-213ENST00000533585 ITPKCQ96DU7 683 aa5.39□□□□□ -1.55
C11orf54-213ENST00000533585 MRGPRX3Q96LB0 322 aa5.39□□□□□ -1.55
C11orf54-213ENST00000533585 MAP3K14Q99558 947 aa5.39□□□□□ -1.55
C11orf54-213ENST00000533585 SMOC1Q9H4F8 434 aa5.39□□□□□ -1.55
C11orf54-213ENST00000533585 POLMQ9NP87 494 aaPredicted RBP5.39□□□□□ -1.55
C11orf54-213ENST00000533585 HELLSQ9NRZ9 838 aa5.39□□□□□ -1.55
C11orf54-213ENST00000533585 CDC23Q9UJX2 597 aa5.39□□□□□ -1.55
C11orf54-213ENST00000533585 GJD2Q9UKL4 321 aa5.39□□□□□ -1.55
C11orf54-213ENST00000533585 TMX2Q9Y320 296 aa5.39□□□□□ -1.55
C11orf54-213ENST00000533585 TACC3Q9Y6A5 838 aa5.39□□□□□ -1.55
C11orf54-213ENST00000533585 FAM155AB1AL88 458 aaPredicted RBP5.38□□□□□ -1.55
C11orf54-213ENST00000533585 WDR64B1ANS9 1081 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 FAM227AF5H4B4 570 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 H3BRJ5 948 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 MAFKO60675 156 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 MTA2O94776 668 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 GFPT2O94808 682 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 ABCB4P21439 1286 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 ATICP31939 592 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 KRT20P35900 424 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 RAD52P43351 418 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 STT3AP46977 705 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 MAP4K2Q12851 820 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 SFSWAPQ12872 951 aaKnown RBP5.38□□□□□ -1.55
C11orf54-213ENST00000533585 AP3B2Q13367 1082 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 BLMHQ13867 455 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 SEPT2Q15019 361 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 WDR44Q5JSH3 913 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 ATAT1Q5SQI0 421 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 SAMD5Q5TGI4 173 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 SPATA1Q5VX52 437 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 ITPRIPL1Q6GPH6 555 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 CASC1Q6TDU7 716 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 USP53Q70EK8 1073 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 PDZD4Q76G19 769 aaPredicted RBP5.38□□□□□ -1.55
C11orf54-213ENST00000533585 DHX32Q7L7V1 743 aaKnown RBP5.38□□□□□ -1.55
C11orf54-213ENST00000533585 OVCH2Q7RTZ1 564 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 GPR155Q7Z3F1 870 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 TRIM59Q8IWR1 403 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 CCDC144CPQ8IYA2 1237 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 PHACTR4Q8IZ21 702 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 CAMKK1Q8N5S9 505 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 ZNF513Q8N8E2 541 aaPredicted RBP5.38□□□□□ -1.55
C11orf54-213ENST00000533585 GOLGA1Q92805 767 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 HPS3Q969F9 1004 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 TMEM87BQ96K49 555 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 UBXN10Q96LJ8 280 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 TSPAN18Q96SJ8 248 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 INSM2Q96T92 566 aaPredicted RBP5.38□□□□□ -1.55
C11orf54-213ENST00000533585 NUDT16L1Q9BRJ7 211 aaKnown RBP5.38□□□□□ -1.55
C11orf54-213ENST00000533585 CERS4Q9HA82 394 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 TIMMDC1Q9NPL8 285 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 CYP26B1Q9NR63 512 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 SMYD2Q9NRG4 433 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 GPRC5BQ9NZH0 403 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 ARHGAP28Q9P2N2 729 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 B4GALT6Q9UBX8 382 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 ACAD8Q9UKU7 415 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 WASF2Q9Y6W5 498 aa5.38□□□□□ -1.55
C11orf54-213ENST00000533585 ANKRD18BA2A2Z9 1011 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 SPDYE3A6NKU9 549 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 GOLGA8AA7E2F4 631 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 GOLGA8BA8MQT2 603 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 RNF223E7ERA6 249 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 EYA2O00167 538 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 GOLIM4O00461 696 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 TRAF5O00463 557 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 H2AFYO75367 372 aaKnown RBP5.37□□□□□ -1.55
C11orf54-213ENST00000533585 TBC1D8O95759 1140 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 ATP2A2P16615 1042 aaKnown RBP5.37□□□□□ -1.55
C11orf54-213ENST00000533585 RPS6KB1P23443 525 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 OAS2P29728 719 aaKnown RBP5.37□□□□□ -1.55
C11orf54-213ENST00000533585 KRT9P35527 623 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 YARSP54577 528 aaKnown RBP5.37□□□□□ -1.55
C11orf54-213ENST00000533585 ATP11AP98196 1134 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 ICA1Q05084 483 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 TAF12Q16514 161 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 CLEC16AQ2KHT3 1053 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 ANO4Q32M45 955 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 BROXQ5VW32 411 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 LILRA6Q6PI73 481 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 FASTKD5Q7L8L6 764 aaKnown RBP5.37□□□□□ -1.55
C11orf54-213ENST00000533585 PRICKLE2Q7Z3G6 844 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 MTDHQ86UE4 582 aaKnown RBP5.37□□□□□ -1.55
C11orf54-213ENST00000533585 COLGALT2Q8IYK4 626 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 ANKLE1Q8NAG6 615 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 FAM13CQ8NE31 585 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 PPP1R35Q8TAP8 253 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 ATRIPQ8WXE1 791 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 NELL1Q92832 810 aa5.37□□□□□ -1.55
C11orf54-213ENST00000533585 USP13Q92995 863 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms