RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 ARIH2O95376 493 aa18.38■□□□□ 0.53
LDLRAD3-205ENST00000532490 PSMC6P62333 389 aa18.38■□□□□ 0.53
LDLRAD3-205ENST00000532490 FPGSQ05932 587 aa18.38■□□□□ 0.53
LDLRAD3-205ENST00000532490 MFSD5Q6N075 450 aa18.38■□□□□ 0.53
LDLRAD3-205ENST00000532490 CCDC62Q6P9F0 684 aa18.38■□□□□ 0.53
LDLRAD3-205ENST00000532490 DEFB123Q8N688 67 aa18.38■□□□□ 0.53
LDLRAD3-205ENST00000532490 COPS5Q92905 334 aa18.38■□□□□ 0.53
LDLRAD3-205ENST00000532490 PIGSQ96S52 555 aa18.38■□□□□ 0.53
LDLRAD3-205ENST00000532490 IWS1Q96ST2 819 aa18.38■□□□□ 0.53
LDLRAD3-205ENST00000532490 RMDN3Q96TC7 470 aa18.38■□□□□ 0.53
LDLRAD3-205ENST00000532490 MTA3Q9BTC8 594 aa18.38■□□□□ 0.53
LDLRAD3-205ENST00000532490 SEZ6LQ9BYH1 1024 aa18.38■□□□□ 0.53
LDLRAD3-205ENST00000532490 GPHNQ9NQX3 736 aaPredicted RBP18.38■□□□□ 0.53
LDLRAD3-205ENST00000532490 COL6A3P12111 3177 aa18.38■□□□□ 0.53
LDLRAD3-205ENST00000532490 A6NJR5 290 aa18.37■□□□□ 0.53
LDLRAD3-205ENST00000532490 CFBP00751 764 aa18.37■□□□□ 0.53
LDLRAD3-205ENST00000532490 PURAQ00577 322 aaKnown RBP18.37■□□□□ 0.53
LDLRAD3-205ENST00000532490 PPP2R5BQ15173 497 aa18.37■□□□□ 0.53
LDLRAD3-205ENST00000532490 OR6J1Q8NGC5 347 aa18.37■□□□□ 0.53
LDLRAD3-205ENST00000532490 MAP3K14Q99558 947 aa18.37■□□□□ 0.53
LDLRAD3-205ENST00000532490 POLR3EQ9NVU0 708 aa18.37■□□□□ 0.53
LDLRAD3-205ENST00000532490 MTMR10Q9NXD2 777 aa18.37■□□□□ 0.53
LDLRAD3-205ENST00000532490 MAP3K20Q9NYL2 800 aaKnown RBP18.37■□□□□ 0.53
LDLRAD3-205ENST00000532490 PCDHA1Q9Y5I3 950 aa18.37■□□□□ 0.53
LDLRAD3-205ENST00000532490 KIAA1217Q5T5P2 1943 aa18.37■□□□□ 0.53
LDLRAD3-205ENST00000532490 TLR3O15455 904 aaKnown RBP18.36■□□□□ 0.53
LDLRAD3-205ENST00000532490 TXNP10599 105 aaKnown RBP18.36■□□□□ 0.53
LDLRAD3-205ENST00000532490 CPT1AP50416 773 aa18.36■□□□□ 0.53
LDLRAD3-205ENST00000532490 TTLL4Q14679 1199 aa18.36■□□□□ 0.53
LDLRAD3-205ENST00000532490 CREB3L3Q68CJ9 461 aa18.36■□□□□ 0.53
LDLRAD3-205ENST00000532490 FAM109BQ6ICB4 259 aaPredicted RBP18.36■□□□□ 0.53
LDLRAD3-205ENST00000532490 C16orf59Q7L2K0 433 aa18.36■□□□□ 0.53
LDLRAD3-205ENST00000532490 CATIPQ7Z7H3 387 aa18.36■□□□□ 0.53
LDLRAD3-205ENST00000532490 PXMP2Q9NR77 195 aa18.36■□□□□ 0.53
LDLRAD3-205ENST00000532490 SCN10AQ9Y5Y9 1956 aa18.36■□□□□ 0.53
LDLRAD3-205ENST00000532490 PNMA6FA0A0J9YX94 578 aa18.35■□□□□ 0.53
LDLRAD3-205ENST00000532490 PRC1O43663 620 aa18.35■□□□□ 0.53
LDLRAD3-205ENST00000532490 B4GALT4O60513 344 aa18.35■□□□□ 0.53
LDLRAD3-205ENST00000532490 MCM5P33992 734 aa18.35■□□□□ 0.53
LDLRAD3-205ENST00000532490 STXBP2Q15833 593 aa18.35■□□□□ 0.53
LDLRAD3-205ENST00000532490 HOMER1Q86YM7 354 aa18.35■□□□□ 0.53
LDLRAD3-205ENST00000532490 ZNF654Q8IZM8 581 aa18.35■□□□□ 0.53
LDLRAD3-205ENST00000532490 SAMD3Q8N6K7 520 aa18.35■□□□□ 0.53
LDLRAD3-205ENST00000532490 TRPV6Q9H1D0 765 aa18.35■□□□□ 0.53
LDLRAD3-205ENST00000532490 ANO2Q9NQ90 1003 aa18.35■□□□□ 0.53
LDLRAD3-205ENST00000532490 SH2B2O14492 632 aaPredicted RBP18.34■□□□□ 0.53
LDLRAD3-205ENST00000532490 NR3C2P08235 984 aa18.34■□□□□ 0.53
LDLRAD3-205ENST00000532490 MYL3P08590 195 aa18.34■□□□□ 0.53
LDLRAD3-205ENST00000532490 EIF2AK2P19525 551 aaKnown RBP18.34■□□□□ 0.53
LDLRAD3-205ENST00000532490 ARHGEF16Q5VV41 709 aa18.34■□□□□ 0.53
LDLRAD3-205ENST00000532490 SEPT14Q6ZU15 432 aa18.34■□□□□ 0.53
LDLRAD3-205ENST00000532490 TMEM87BQ96K49 555 aa18.34■□□□□ 0.53
LDLRAD3-205ENST00000532490 MTG1Q9BT17 334 aaPredicted RBP18.34■□□□□ 0.53
LDLRAD3-205ENST00000532490 MYL10Q9BUA6 226 aa18.34■□□□□ 0.53
LDLRAD3-205ENST00000532490 PPP1R12CQ9BZL4 782 aa18.34■□□□□ 0.53
LDLRAD3-205ENST00000532490 ALDH8A1Q9H2A2 487 aaPredicted RBP18.34■□□□□ 0.53
LDLRAD3-205ENST00000532490 UMODL1Q5DID0 1318 aa18.33■□□□□ 0.53
LDLRAD3-205ENST00000532490 EIF3JO75822 258 aaKnown RBP18.33■□□□□ 0.52
LDLRAD3-205ENST00000532490 RGS20O76081 388 aa18.33■□□□□ 0.52
LDLRAD3-205ENST00000532490 DDAH1O94760 285 aa18.33■□□□□ 0.52
LDLRAD3-205ENST00000532490 CSF2RAP15509 400 aa18.33■□□□□ 0.52
LDLRAD3-205ENST00000532490 SMARCA1P28370 1054 aa18.33■□□□□ 0.52
LDLRAD3-205ENST00000532490 CYP2C18P33260 490 aa18.33■□□□□ 0.52
LDLRAD3-205ENST00000532490 LIFRP42702 1097 aa18.33■□□□□ 0.52
LDLRAD3-205ENST00000532490 SMAD3P84022 425 aaKnown RBP18.33■□□□□ 0.52
LDLRAD3-205ENST00000532490 ARHGAP1Q07960 439 aa18.33■□□□□ 0.52
LDLRAD3-205ENST00000532490 TRAF1Q13077 416 aa18.33■□□□□ 0.52
LDLRAD3-205ENST00000532490 LY6KQ17RY6 165 aa18.33■□□□□ 0.52
LDLRAD3-205ENST00000532490 CASC1Q6TDU7 716 aa18.33■□□□□ 0.52
LDLRAD3-205ENST00000532490 TMTC2Q8N394 836 aa18.33■□□□□ 0.52
LDLRAD3-205ENST00000532490 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.33■□□□□ 0.52
LDLRAD3-205ENST00000532490 PDCD2LQ9BRP1 358 aa18.33■□□□□ 0.52
LDLRAD3-205ENST00000532490 SPZ1Q9BXG8 430 aa18.33■□□□□ 0.52
LDLRAD3-205ENST00000532490 DDX41Q9UJV9 622 aaKnown RBP18.33■□□□□ 0.52
LDLRAD3-205ENST00000532490 KPNA6O60684 536 aa18.32■□□□□ 0.52
LDLRAD3-205ENST00000532490 HOXA13P31271 388 aaPredicted RBP18.32■□□□□ 0.52
LDLRAD3-205ENST00000532490 PPIGQ13427 754 aaKnown RBP eCLIP18.32■□□□□ 0.52
LDLRAD3-205ENST00000532490 BRDTQ58F21 947 aaPredicted RBP18.32■□□□□ 0.52
LDLRAD3-205ENST00000532490 TMEM240Q5SV17 173 aa18.32■□□□□ 0.52
LDLRAD3-205ENST00000532490 VSIG10LQ86VR7 867 aa18.32■□□□□ 0.52
LDLRAD3-205ENST00000532490 TMEM199Q8N511 208 aa18.32■□□□□ 0.52
LDLRAD3-205ENST00000532490 RNPC3Q96LT9 517 aaKnown RBP18.32■□□□□ 0.52
LDLRAD3-205ENST00000532490 NOC4LQ9BVI4 516 aaKnown RBP18.32■□□□□ 0.52
LDLRAD3-205ENST00000532490 GH1P01241 217 aa18.31■□□□□ 0.52
LDLRAD3-205ENST00000532490 PGM5Q15124 567 aa18.31■□□□□ 0.52
LDLRAD3-205ENST00000532490 NBPF20Q3BBV1 942 aa18.31■□□□□ 0.52
LDLRAD3-205ENST00000532490 RASIP1Q5U651 963 aa18.31■□□□□ 0.52
LDLRAD3-205ENST00000532490 IL31RAQ8NI17 732 aa18.31■□□□□ 0.52
LDLRAD3-205ENST00000532490 CTCFLQ8NI51 663 aaPredicted RBP18.31■□□□□ 0.52
LDLRAD3-205ENST00000532490 AFG1LQ8WV93 481 aa18.31■□□□□ 0.52
LDLRAD3-205ENST00000532490 EMID1Q96A84 441 aaPredicted RBP18.31■□□□□ 0.52
LDLRAD3-205ENST00000532490 HIPK3Q9H422 1215 aa18.31■□□□□ 0.52
LDLRAD3-205ENST00000532490 TRMT13Q9NUP7 481 aaKnown RBP18.31■□□□□ 0.52
LDLRAD3-205ENST00000532490 GCOM1H8Y6P7 765 aaPredicted RBP18.3■□□□□ 0.52
LDLRAD3-205ENST00000532490 PLEKHA8P1O95397 391 aa18.3■□□□□ 0.52
LDLRAD3-205ENST00000532490 MMP3P08254 477 aa18.3■□□□□ 0.52
LDLRAD3-205ENST00000532490 POLR2MP0CAP2 368 aa18.3■□□□□ 0.52
LDLRAD3-205ENST00000532490 KIF5BP33176 963 aa18.3■□□□□ 0.52
LDLRAD3-205ENST00000532490 TSGA10IPQ3SY00 556 aa18.3■□□□□ 0.52
LDLRAD3-205ENST00000532490 NFRKBQ6P4R8 1299 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms