RNA–Protein interactions for RNA: ENST00000528281.5

CNKSR1-212, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-212ENST00000528281 PCDHA1Q9Y5I3 950 aa20.68■□□□□ 0.9
CNKSR1-212ENST00000528281 OPLAHO14841 1288 aa20.67■□□□□ 0.9
CNKSR1-212ENST00000528281 CFBP00751 764 aa20.67■□□□□ 0.9
CNKSR1-212ENST00000528281 TIMP1P01033 207 aa20.67■□□□□ 0.9
CNKSR1-212ENST00000528281 HSD17B4P51659 736 aa20.67■□□□□ 0.9
CNKSR1-212ENST00000528281 ITGA7Q13683 1181 aa20.67■□□□□ 0.9
CNKSR1-212ENST00000528281 TTLL4Q14679 1199 aa20.67■□□□□ 0.9
CNKSR1-212ENST00000528281 SHHQ15465 462 aa20.67■□□□□ 0.9
CNKSR1-212ENST00000528281 SLC35G1Q2M3R5 365 aa20.67■□□□□ 0.9
CNKSR1-212ENST00000528281 CREB3L3Q68CJ9 461 aa20.67■□□□□ 0.9
CNKSR1-212ENST00000528281 OR6J1Q8NGC5 347 aa20.67■□□□□ 0.9
CNKSR1-212ENST00000528281 LY9Q9HBG7 655 aa20.67■□□□□ 0.9
CNKSR1-212ENST00000528281 POLR3EQ9NVU0 708 aa20.67■□□□□ 0.9
CNKSR1-212ENST00000528281 BAZ2BQ9UIF8 2168 aaKnown RBP20.67■□□□□ 0.9
CNKSR1-212ENST00000528281 PRC1O43663 620 aa20.66■□□□□ 0.9
CNKSR1-212ENST00000528281 CYTH3O43739 400 aa20.66■□□□□ 0.9
CNKSR1-212ENST00000528281 CD4P01730 458 aa20.66■□□□□ 0.9
CNKSR1-212ENST00000528281 TXNP10599 105 aaKnown RBP20.66■□□□□ 0.9
CNKSR1-212ENST00000528281 FPGSQ05932 587 aa20.66■□□□□ 0.9
CNKSR1-212ENST00000528281 STXBP2Q15833 593 aa20.66■□□□□ 0.9
CNKSR1-212ENST00000528281 BRDTQ58F21 947 aaPredicted RBP20.66■□□□□ 0.9
CNKSR1-212ENST00000528281 C9orf50Q5SZB4 431 aa20.66■□□□□ 0.9
CNKSR1-212ENST00000528281 ARHGEF16Q5VV41 709 aa20.66■□□□□ 0.9
CNKSR1-212ENST00000528281 HOMER1Q86YM7 354 aa20.66■□□□□ 0.9
CNKSR1-212ENST00000528281 TMTC2Q8N394 836 aa20.66■□□□□ 0.9
CNKSR1-212ENST00000528281 TMEM87BQ96K49 555 aa20.66■□□□□ 0.9
CNKSR1-212ENST00000528281 PIGSQ96S52 555 aa20.66■□□□□ 0.9
CNKSR1-212ENST00000528281 GRIN2DO15399 1336 aa20.65■□□□□ 0.9
CNKSR1-212ENST00000528281 PNMA6FA0A0J9YX94 578 aa20.65■□□□□ 0.9
CNKSR1-212ENST00000528281 DDAH1O94760 285 aa20.65■□□□□ 0.9
CNKSR1-212ENST00000528281 ZNF654Q8IZM8 581 aa20.65■□□□□ 0.9
CNKSR1-212ENST00000528281 PXMP2Q9NR77 195 aa20.65■□□□□ 0.9
CNKSR1-212ENST00000528281 KIF5BP33176 963 aa20.64■□□□□ 0.89
CNKSR1-212ENST00000528281 PURAQ00577 322 aaKnown RBP20.64■□□□□ 0.89
CNKSR1-212ENST00000528281 RNF20Q5VTR2 975 aa20.64■□□□□ 0.89
CNKSR1-212ENST00000528281 MFSD5Q6N075 450 aa20.64■□□□□ 0.89
CNKSR1-212ENST00000528281 CTCFLQ8NI51 663 aaPredicted RBP20.64■□□□□ 0.89
CNKSR1-212ENST00000528281 CCDC136Q96JN2 1154 aa20.64■□□□□ 0.89
CNKSR1-212ENST00000528281 GPHNQ9NQX3 736 aaPredicted RBP20.64■□□□□ 0.89
CNKSR1-212ENST00000528281 A6NJR5 290 aa20.63■□□□□ 0.89
CNKSR1-212ENST00000528281 SH2B2O14492 632 aaPredicted RBP20.63■□□□□ 0.89
CNKSR1-212ENST00000528281 KPNA6O60684 536 aa20.63■□□□□ 0.89
CNKSR1-212ENST00000528281 CDC45O75419 566 aa20.63■□□□□ 0.89
CNKSR1-212ENST00000528281 EIF3JO75822 258 aaKnown RBP20.63■□□□□ 0.89
CNKSR1-212ENST00000528281 ARIH2O95376 493 aa20.63■□□□□ 0.89
CNKSR1-212ENST00000528281 NR3C2P08235 984 aa20.63■□□□□ 0.89
CNKSR1-212ENST00000528281 MYL3P08590 195 aa20.63■□□□□ 0.89
CNKSR1-212ENST00000528281 EIF2AK2P19525 551 aaKnown RBP20.63■□□□□ 0.89
CNKSR1-212ENST00000528281 SMARCA1P28370 1054 aa20.63■□□□□ 0.89
CNKSR1-212ENST00000528281 LIFRP42702 1097 aa20.63■□□□□ 0.89
CNKSR1-212ENST00000528281 EPHB4P54760 987 aa20.63■□□□□ 0.89
CNKSR1-212ENST00000528281 PSMC6P62333 389 aa20.63■□□□□ 0.89
CNKSR1-212ENST00000528281 CCDC62Q6P9F0 684 aa20.63■□□□□ 0.89
CNKSR1-212ENST00000528281 SEPT14Q6ZU15 432 aa20.63■□□□□ 0.89
CNKSR1-212ENST00000528281 DEFB123Q8N688 67 aa20.63■□□□□ 0.89
CNKSR1-212ENST00000528281 COPS5Q92905 334 aa20.63■□□□□ 0.89
CNKSR1-212ENST00000528281 CCDC69A6NI79 296 aa20.62■□□□□ 0.89
CNKSR1-212ENST00000528281 NFXL1Q6ZNB6 911 aa20.62■□□□□ 0.89
CNKSR1-212ENST00000528281 LZTS2Q9BRK4 669 aa20.62■□□□□ 0.89
CNKSR1-212ENST00000528281 MTG1Q9BT17 334 aaPredicted RBP20.62■□□□□ 0.89
CNKSR1-212ENST00000528281 MYL10Q9BUA6 226 aa20.62■□□□□ 0.89
CNKSR1-212ENST00000528281 SPZ1Q9BXG8 430 aa20.62■□□□□ 0.89
CNKSR1-212ENST00000528281 SCN10AQ9Y5Y9 1956 aa20.62■□□□□ 0.89
CNKSR1-212ENST00000528281 GCOM1H8Y6P7 765 aaPredicted RBP20.61■□□□□ 0.89
CNKSR1-212ENST00000528281 POLR2MP0CAP2 368 aa20.61■□□□□ 0.89
CNKSR1-212ENST00000528281 CALM1P0DP23 149 aa20.61■□□□□ 0.89
CNKSR1-212ENST00000528281 CALM2P0DP24 149 aa20.61■□□□□ 0.89
CNKSR1-212ENST00000528281 CALM3P0DP25 149 aa20.61■□□□□ 0.89
CNKSR1-212ENST00000528281 HOXA13P31271 388 aaPredicted RBP20.61■□□□□ 0.89
CNKSR1-212ENST00000528281 GNAQP50148 359 aa20.61■□□□□ 0.89
CNKSR1-212ENST00000528281 PPIGQ13427 754 aaKnown RBP eCLIP20.61■□□□□ 0.898e-7■■■□□ 14.9
CNKSR1-212ENST00000528281 LY6KQ17RY6 165 aa20.61■□□□□ 0.89
CNKSR1-212ENST00000528281 FAM109BQ6ICB4 259 aaPredicted RBP20.61■□□□□ 0.89
CNKSR1-212ENST00000528281 TMEM199Q8N511 208 aa20.61■□□□□ 0.89
CNKSR1-212ENST00000528281 RNPC3Q96LT9 517 aaKnown RBP20.61■□□□□ 0.89
CNKSR1-212ENST00000528281 PDCD2LQ9BRP1 358 aa20.61■□□□□ 0.89
CNKSR1-212ENST00000528281 B4GALT4O60513 344 aa20.6■□□□□ 0.89
CNKSR1-212ENST00000528281 GH1P01241 217 aa20.6■□□□□ 0.89
CNKSR1-212ENST00000528281 COL9A3Q14050 684 aaPredicted RBP20.6■□□□□ 0.89
CNKSR1-212ENST00000528281 Q7L0L9 218 aa20.6■□□□□ 0.89
CNKSR1-212ENST00000528281 RRP36Q96EU6 259 aaKnown RBP20.6■□□□□ 0.89
CNKSR1-212ENST00000528281 PPP1R12CQ9BZL4 782 aa20.6■□□□□ 0.89
CNKSR1-212ENST00000528281 TRPV6Q9H1D0 765 aa20.6■□□□□ 0.89
CNKSR1-212ENST00000528281 ALDH8A1Q9H2A2 487 aaPredicted RBP20.6■□□□□ 0.89
CNKSR1-212ENST00000528281 HIPK3Q9H422 1215 aa20.6■□□□□ 0.89
CNKSR1-212ENST00000528281 DDX41Q9UJV9 622 aaKnown RBP20.6■□□□□ 0.89
CNKSR1-212ENST00000528281 SMAD3P84022 425 aaKnown RBP20.59■□□□□ 0.89
CNKSR1-212ENST00000528281 PGM5Q15124 567 aa20.59■□□□□ 0.89
CNKSR1-212ENST00000528281 VSIG10LQ86VR7 867 aa20.59■□□□□ 0.89
CNKSR1-212ENST00000528281 MTMR10Q9NXD2 777 aa20.59■□□□□ 0.89
CNKSR1-212ENST00000528281 SLC12A7Q9Y666 1083 aa20.59■□□□□ 0.89
CNKSR1-212ENST00000528281 MRVI1Q9Y6F6 885 aa20.59■□□□□ 0.89
CNKSR1-212ENST00000528281 MYH7BA7E2Y1 1941 aa20.59■□□□□ 0.89
CNKSR1-212ENST00000528281 SUPT20HL2P0C7V6 817 aa20.58■□□□□ 0.89
CNKSR1-212ENST00000528281 MYCLP12524 364 aaPredicted RBP20.58■□□□□ 0.89
CNKSR1-212ENST00000528281 CSF2RAP15509 400 aa20.58■□□□□ 0.89
CNKSR1-212ENST00000528281 CYP2C18P33260 490 aa20.58■□□□□ 0.89
CNKSR1-212ENST00000528281 ARHGAP1Q07960 439 aa20.58■□□□□ 0.89
CNKSR1-212ENST00000528281 TSGA10IPQ3SY00 556 aa20.58■□□□□ 0.89
CNKSR1-212ENST00000528281 NFRKBQ6P4R8 1299 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms