RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 POMZP3Q6PJE2 187 aa7.03□□□□□ -1.28
CTHRC1-204ENST00000520880 LIPIQ6XZB0 460 aa7.03□□□□□ -1.28
CTHRC1-204ENST00000520880 DPF3Q92784 378 aa7.03□□□□□ -1.28
CTHRC1-204ENST00000520880 MMP19Q99542 508 aa7.03□□□□□ -1.28
CTHRC1-204ENST00000520880 NUDT5Q9UKK9 219 aa7.03□□□□□ -1.28
CTHRC1-204ENST00000520880 SIT1Q9Y3P8 196 aa7.03□□□□□ -1.28
CTHRC1-204ENST00000520880 FUCA1P04066 466 aa7.02□□□□□ -1.29
CTHRC1-204ENST00000520880 NTRK1P04629 796 aa7.02□□□□□ -1.29
CTHRC1-204ENST00000520880 KCNC1P48547 511 aa7.02□□□□□ -1.29
CTHRC1-204ENST00000520880 ZNF143P52747 638 aaPredicted RBP7.02□□□□□ -1.29
CTHRC1-204ENST00000520880 CYP4F3Q08477 520 aa7.02□□□□□ -1.29
CTHRC1-204ENST00000520880 SLC9A5Q14940 896 aa7.02□□□□□ -1.29
CTHRC1-204ENST00000520880 NCAPHQ15003 741 aa7.02□□□□□ -1.29
CTHRC1-204ENST00000520880 GTF2IRD2BQ6EKJ0 949 aa7.02□□□□□ -1.29
CTHRC1-204ENST00000520880 FRMD5Q7Z6J6 570 aa7.02□□□□□ -1.29
CTHRC1-204ENST00000520880 GTF2IRD2Q86UP8 949 aa7.02□□□□□ -1.29
CTHRC1-204ENST00000520880 TRIM59Q8IWR1 403 aa7.02□□□□□ -1.29
CTHRC1-204ENST00000520880 CRACR2BQ8N4Y2 399 aaPredicted RBP7.02□□□□□ -1.29
CTHRC1-204ENST00000520880 SMARCC2Q8TAQ2 1214 aa7.02□□□□□ -1.29
CTHRC1-204ENST00000520880 PLEKHO2Q8TD55 490 aa7.02□□□□□ -1.29
CTHRC1-204ENST00000520880 PPP1R14AQ96A00 147 aa7.02□□□□□ -1.29
CTHRC1-204ENST00000520880 MRGPRX3Q96LB0 322 aa7.02□□□□□ -1.29
CTHRC1-204ENST00000520880 TEPSINQ96N21 525 aa7.02□□□□□ -1.29
CTHRC1-204ENST00000520880 NOX5Q96PH1 765 aa7.02□□□□□ -1.29
CTHRC1-204ENST00000520880 SPATA25Q9BR10 227 aa7.02□□□□□ -1.29
CTHRC1-204ENST00000520880 MRVI1Q9Y6F6 885 aa7.02□□□□□ -1.29
CTHRC1-204ENST00000520880 SH3D21A4FU49 640 aa7.01□□□□□ -1.29
CTHRC1-204ENST00000520880 NOP56O00567 594 aaKnown RBP7.01□□□□□ -1.29
CTHRC1-204ENST00000520880 SMAD7O15105 426 aaKnown RBP7.01□□□□□ -1.29
CTHRC1-204ENST00000520880 NAT2P11245 290 aa7.01□□□□□ -1.29
CTHRC1-204ENST00000520880 INF2Q27J81 1249 aa7.01□□□□□ -1.29
CTHRC1-204ENST00000520880 FRS2Q8WU20 508 aa7.01□□□□□ -1.29
CTHRC1-204ENST00000520880 CPA5Q8WXQ8 436 aa7.01□□□□□ -1.29
CTHRC1-204ENST00000520880 NKX2-4Q9H2Z4 354 aa7.01□□□□□ -1.29
CTHRC1-204ENST00000520880 MARCH2Q9P0N8 246 aa7.01□□□□□ -1.29
CTHRC1-204ENST00000520880 TBX1O43435 398 aa7□□□□□ -1.29
CTHRC1-204ENST00000520880 ZBTB7AO95365 584 aa7□□□□□ -1.29
CTHRC1-204ENST00000520880 CACNB2Q08289 660 aaPredicted RBP7□□□□□ -1.29
CTHRC1-204ENST00000520880 C6orf15Q6UXA7 325 aaPredicted RBP7□□□□□ -1.29
CTHRC1-204ENST00000520880 TEX2Q8IWB9 1127 aa7□□□□□ -1.29
CTHRC1-204ENST00000520880 NPLOC4Q8TAT6 608 aa7□□□□□ -1.29
CTHRC1-204ENST00000520880 CYP26B1Q9NR63 512 aa7□□□□□ -1.29
CTHRC1-204ENST00000520880 B2RBV5 119 aa6.99□□□□□ -1.29
CTHRC1-204ENST00000520880 PRICKLE3O43900 615 aaPredicted RBP6.99□□□□□ -1.29
CTHRC1-204ENST00000520880 BTG4Q9NY30 223 aa6.99□□□□□ -1.29
CTHRC1-204ENST00000520880 ARNTLO00327 626 aa6.98□□□□□ -1.29
CTHRC1-204ENST00000520880 CELA3BP08861 270 aa6.98□□□□□ -1.29
CTHRC1-204ENST00000520880 NT5DC1Q5TFE4 455 aa6.98□□□□□ -1.29
CTHRC1-204ENST00000520880 BTN2A2Q8WVV5 523 aa6.98□□□□□ -1.29
CTHRC1-204ENST00000520880 DDX11Q96FC9 970 aa6.98□□□□□ -1.29
CTHRC1-204ENST00000520880 SYT3Q9BQG1 590 aa6.98□□□□□ -1.29
CTHRC1-204ENST00000520880 CAPN10Q9HC96 672 aa6.98□□□□□ -1.29
CTHRC1-204ENST00000520880 SPATA6Q9NWH7 488 aaPredicted RBP6.98□□□□□ -1.29
CTHRC1-204ENST00000520880 ACTR10Q9NZ32 417 aa6.98□□□□□ -1.29
CTHRC1-204ENST00000520880 TMEFF2Q9UIK5 374 aaPredicted RBP6.98□□□□□ -1.29
CTHRC1-204ENST00000520880 C22orf46C9J442 243 aa6.97□□□□□ -1.29
CTHRC1-204ENST00000520880 SGSM2O43147 1006 aa6.97□□□□□ -1.29
CTHRC1-204ENST00000520880 ITGAVP06756 1048 aa6.97□□□□□ -1.29
CTHRC1-204ENST00000520880 C8BP07358 591 aa6.97□□□□□ -1.29
CTHRC1-204ENST00000520880 FPR2P25090 351 aa6.97□□□□□ -1.29
CTHRC1-204ENST00000520880 ERCC5P28715 1186 aaPredicted RBP6.97□□□□□ -1.29
CTHRC1-204ENST00000520880 KRTAP10-2P60368 255 aa6.97□□□□□ -1.29
CTHRC1-204ENST00000520880 RTP5Q14D33 572 aa6.97□□□□□ -1.29
CTHRC1-204ENST00000520880 LARP1BQ659C4 914 aaKnown RBP6.97□□□□□ -1.29
CTHRC1-204ENST00000520880 ZNF227Q86WZ6 799 aa6.97□□□□□ -1.29
CTHRC1-204ENST00000520880 DCP2Q8IU60 420 aaKnown RBP6.97□□□□□ -1.29
CTHRC1-204ENST00000520880 CCDC103Q8IW40 242 aa6.97□□□□□ -1.29
CTHRC1-204ENST00000520880 FAM178BQ8IXR5 827 aa6.97□□□□□ -1.29
CTHRC1-204ENST00000520880 CARFQ8N187 725 aa6.97□□□□□ -1.29
CTHRC1-204ENST00000520880 SSBP05455 408 aaKnown RBP eCLIP6.96□□□□□ -1.3
CTHRC1-204ENST00000520880 SV2CQ496J9 727 aa6.96□□□□□ -1.3
CTHRC1-204ENST00000520880 PRRT2Q7Z6L0 340 aaPredicted RBP6.96□□□□□ -1.3
CTHRC1-204ENST00000520880 MICAL1Q8TDZ2 1067 aa6.96□□□□□ -1.3
CTHRC1-204ENST00000520880 ZBTB8AQ96BR9 441 aa6.96□□□□□ -1.3
CTHRC1-204ENST00000520880 BDH2Q9BUT1 245 aa6.96□□□□□ -1.3
CTHRC1-204ENST00000520880 USP40Q9NVE5 1235 aa6.96□□□□□ -1.3
CTHRC1-204ENST00000520880 SUSD5O60279 629 aa6.95□□□□□ -1.3
CTHRC1-204ENST00000520880 CYP2C8P10632 490 aa6.95□□□□□ -1.3
CTHRC1-204ENST00000520880 ETFBP38117 255 aa6.95□□□□□ -1.3
CTHRC1-204ENST00000520880 RBM10P98175 930 aaKnown RBP6.95□□□□□ -1.3
CTHRC1-204ENST00000520880 SMAD4Q13485 552 aaKnown RBP6.95□□□□□ -1.3
CTHRC1-204ENST00000520880 SF1Q15637 639 aaKnown RBP6.95□□□□□ -1.3
CTHRC1-204ENST00000520880 TNNI3KQ59H18 835 aa6.95□□□□□ -1.3
CTHRC1-204ENST00000520880 ZFYVE27Q5T4F4 411 aa6.95□□□□□ -1.3
CTHRC1-204ENST00000520880 ERICH6BQ5W0A0 696 aa6.95□□□□□ -1.3
CTHRC1-204ENST00000520880 MRM1Q6IN84 353 aaKnown RBP6.95□□□□□ -1.3
CTHRC1-204ENST00000520880 ETV3LQ6ZN32 361 aa6.95□□□□□ -1.3
CTHRC1-204ENST00000520880 FERMT3Q86UX7 667 aa6.95□□□□□ -1.3
CTHRC1-204ENST00000520880 NLRP10Q86W26 655 aa6.95□□□□□ -1.3
CTHRC1-204ENST00000520880 FAM26EQ8N5C1 309 aa6.95□□□□□ -1.3
CTHRC1-204ENST00000520880 LINC00482Q8N8I6 264 aa6.95□□□□□ -1.3
CTHRC1-204ENST00000520880 GORASP1Q9BQQ3 440 aa6.95□□□□□ -1.3
CTHRC1-204ENST00000520880 AP5M1Q9H0R1 490 aa6.95□□□□□ -1.3
CTHRC1-204ENST00000520880 PRKAG3Q9UGI9 489 aa6.95□□□□□ -1.3
CTHRC1-204ENST00000520880 NOBOXO60393 691 aa6.94□□□□□ -1.3
CTHRC1-204ENST00000520880 DDAH1O94760 285 aa6.94□□□□□ -1.3
CTHRC1-204ENST00000520880 HOXC12P31275 282 aa6.94□□□□□ -1.3
CTHRC1-204ENST00000520880 ECI1P42126 302 aa6.94□□□□□ -1.3
CTHRC1-204ENST00000520880 PRSS53Q2L4Q9 553 aa6.94□□□□□ -1.3
CTHRC1-204ENST00000520880 E4F1Q66K89 784 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms