RNA–Protein interactions for RNA: ENST00000519509.5

CCDC25-204, Transcript of coiled-coil domain containing 25, humanhuman

TSL 2

Gene CCDC25, Length 977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-204ENST00000519509 VTA1Q9NP79 307 aa11.25□□□□□ -0.61
CCDC25-204ENST00000519509 POLR3EQ9NVU0 708 aa11.25□□□□□ -0.61
CCDC25-204ENST00000519509 COG6Q9Y2V7 657 aa11.25□□□□□ -0.61
CCDC25-204ENST00000519509 RALGAPA2Q2PPJ7 1873 aa11.24□□□□□ -0.61
CCDC25-204ENST00000519509 C2orf72A6NCS6 295 aa11.24□□□□□ -0.61
CCDC25-204ENST00000519509 MYL3P08590 195 aa11.24□□□□□ -0.61
CCDC25-204ENST00000519509 KCNJ6P48051 423 aa11.24□□□□□ -0.61
CCDC25-204ENST00000519509 COL19A1Q14993 1142 aa11.24□□□□□ -0.61
CCDC25-204ENST00000519509 MUM1L1Q5H9M0 696 aa11.24□□□□□ -0.61
CCDC25-204ENST00000519509 NFRKBQ6P4R8 1299 aa11.24□□□□□ -0.61
CCDC25-204ENST00000519509 KIAA1211Q6ZU35 1233 aa11.24□□□□□ -0.61
CCDC25-204ENST00000519509 RETREG2Q8NC44 543 aa11.24□□□□□ -0.61
CCDC25-204ENST00000519509 MKL1Q969V6 931 aa11.24□□□□□ -0.61
CCDC25-204ENST00000519509 DNAJC2Q99543 621 aaKnown RBP11.24□□□□□ -0.61
CCDC25-204ENST00000519509 MTG1Q9BT17 334 aaPredicted RBP11.24□□□□□ -0.61
CCDC25-204ENST00000519509 EPB41L4AQ9HCS5 686 aaPredicted RBP11.24□□□□□ -0.61
CCDC25-204ENST00000519509 IL1RAPL2Q9NP60 686 aa11.24□□□□□ -0.61
CCDC25-204ENST00000519509 CYP39A1Q9NYL5 469 aa11.24□□□□□ -0.61
CCDC25-204ENST00000519509 CLIP2Q9UDT6 1046 aa11.24□□□□□ -0.61
CCDC25-204ENST00000519509 CTDP1Q9Y5B0 961 aaPredicted RBP11.24□□□□□ -0.61
CCDC25-204ENST00000519509 PLXNA3P51805 1871 aa11.23□□□□□ -0.61
CCDC25-204ENST00000519509 RBM47A0AV96 593 aaKnown RBP11.23□□□□□ -0.61
CCDC25-204ENST00000519509 IPO8O15397 1037 aaKnown RBP11.23□□□□□ -0.61
CCDC25-204ENST00000519509 NBNO60934 754 aa11.23□□□□□ -0.61
CCDC25-204ENST00000519509 CXCL10P02778 98 aa11.23□□□□□ -0.61
CCDC25-204ENST00000519509 IRS1P35568 1242 aa11.23□□□□□ -0.61
CCDC25-204ENST00000519509 PUS10Q3MIT2 529 aaKnown RBP11.23□□□□□ -0.61
CCDC25-204ENST00000519509 FAM47CQ5HY64 1035 aa11.23□□□□□ -0.61
CCDC25-204ENST00000519509 RASGRP2Q7LDG7 609 aa11.23□□□□□ -0.61
CCDC25-204ENST00000519509 AMOTL1Q8IY63 956 aa11.23□□□□□ -0.61
CCDC25-204ENST00000519509 STK11IPQ8N1F8 1099 aa11.23□□□□□ -0.61
CCDC25-204ENST00000519509 LRRC47Q8N1G4 583 aaKnown RBP11.23□□□□□ -0.61
CCDC25-204ENST00000519509 ZNF710Q8N1W2 664 aa11.23□□□□□ -0.61
CCDC25-204ENST00000519509 GMCL1P1Q8NEA9 526 aa11.23□□□□□ -0.61
CCDC25-204ENST00000519509 RHPN1Q8TCX5 695 aa11.23□□□□□ -0.61
CCDC25-204ENST00000519509 DHX38Q92620 1227 aaKnown RBP11.23□□□□□ -0.61
CCDC25-204ENST00000519509 FRAT1Q92837 279 aaPredicted RBP11.23□□□□□ -0.61
CCDC25-204ENST00000519509 RAD9AQ99638 391 aa11.23□□□□□ -0.61
CCDC25-204ENST00000519509 C17orf80Q9BSJ5 609 aa11.23□□□□□ -0.61
CCDC25-204ENST00000519509 WDR11Q9BZH6 1224 aa11.23□□□□□ -0.61
CCDC25-204ENST00000519509 PUS7LQ9H0K6 701 aaKnown RBP11.23□□□□□ -0.61
CCDC25-204ENST00000519509 ALG13Q9NP73 1137 aaKnown RBP11.23□□□□□ -0.61
CCDC25-204ENST00000519509 ARPP21Q9UBL0 812 aaPredicted RBP11.23□□□□□ -0.61
CCDC25-204ENST00000519509 SLC4A4Q9Y6R1 1079 aa11.23□□□□□ -0.61
CCDC25-204ENST00000519509 ALAS1P13196 640 aa11.22□□□□□ -0.61
CCDC25-204ENST00000519509 HOXB1P14653 301 aaPredicted RBP11.22□□□□□ -0.61
CCDC25-204ENST00000519509 CPT1AP50416 773 aa11.22□□□□□ -0.61
CCDC25-204ENST00000519509 EMP3P54852 163 aa11.22□□□□□ -0.61
CCDC25-204ENST00000519509 PTPN11Q06124 597 aaPredicted RBP11.22□□□□□ -0.61
CCDC25-204ENST00000519509 TCF15Q12870 199 aa11.22□□□□□ -0.61
CCDC25-204ENST00000519509 BFSP2Q13515 415 aa11.22□□□□□ -0.61
CCDC25-204ENST00000519509 LRRFIP1Q32MZ4 808 aaKnown RBP11.22□□□□□ -0.61
CCDC25-204ENST00000519509 TKFCQ3LXA3 575 aa11.22□□□□□ -0.61
CCDC25-204ENST00000519509 KIAA1217Q5T5P2 1943 aa11.22□□□□□ -0.61
CCDC25-204ENST00000519509 CNKSR3Q6P9H4 555 aa11.22□□□□□ -0.61
CCDC25-204ENST00000519509 ADHFE1Q8IWW8 467 aa11.22□□□□□ -0.61
CCDC25-204ENST00000519509 RPAP2Q8IXW5 612 aaPredicted RBP11.22□□□□□ -0.61
CCDC25-204ENST00000519509 OR6J1Q8NGC5 347 aa11.22□□□□□ -0.61
CCDC25-204ENST00000519509 CEP95Q96GE4 821 aa11.22□□□□□ -0.61
CCDC25-204ENST00000519509 TRERF1Q96PN7 1200 aa11.22□□□□□ -0.61
CCDC25-204ENST00000519509 ZBED2Q9BTP6 218 aa11.22□□□□□ -0.61
CCDC25-204ENST00000519509 PRKAG3Q9UGI9 489 aa11.22□□□□□ -0.61
CCDC25-204ENST00000519509 SYNPO2Q9UMS6 1093 aa11.22□□□□□ -0.61
CCDC25-204ENST00000519509 MYO7AQ13402 2215 aa11.21□□□□□ -0.61
CCDC25-204ENST00000519509 TMEM232C9JQI7 657 aa11.21□□□□□ -0.61
CCDC25-204ENST00000519509 FDX1P10109 184 aa11.21□□□□□ -0.61
CCDC25-204ENST00000519509 BMP3P12645 472 aa11.21□□□□□ -0.61
CCDC25-204ENST00000519509 ALDH5A1P51649 535 aaPredicted RBP11.21□□□□□ -0.61
CCDC25-204ENST00000519509 SNAP25P60880 206 aa11.21□□□□□ -0.61
CCDC25-204ENST00000519509 RBL2Q08999 1139 aa11.21□□□□□ -0.61
CCDC25-204ENST00000519509 UBE3CQ15386 1083 aa11.21□□□□□ -0.61
CCDC25-204ENST00000519509 SBK1Q52WX2 424 aa11.21□□□□□ -0.61
CCDC25-204ENST00000519509 HERC4Q5GLZ8 1057 aaPredicted RBP11.21□□□□□ -0.61
CCDC25-204ENST00000519509 TCEAL5Q5H9L2 206 aa11.21□□□□□ -0.61
CCDC25-204ENST00000519509 SLFN13Q68D06 897 aa11.21□□□□□ -0.61
CCDC25-204ENST00000519509 TRAF7Q6Q0C0 670 aa11.21□□□□□ -0.61
CCDC25-204ENST00000519509 ERC1Q8IUD2 1116 aa11.21□□□□□ -0.61
CCDC25-204ENST00000519509 AFAP1L1Q8TED9 768 aa11.21□□□□□ -0.61
CCDC25-204ENST00000519509 COPS5Q92905 334 aa11.21□□□□□ -0.61
CCDC25-204ENST00000519509 PABPC5Q96DU9 382 aaKnown RBP11.21□□□□□ -0.61
CCDC25-204ENST00000519509 MRPL38Q96DV4 380 aaKnown RBP11.21□□□□□ -0.61
CCDC25-204ENST00000519509 MFSD14AQ96MC6 490 aa11.21□□□□□ -0.61
CCDC25-204ENST00000519509 PAG1Q9NWQ8 432 aa11.21□□□□□ -0.61
CCDC25-204ENST00000519509 MTMR4Q9NYA4 1195 aa11.21□□□□□ -0.61
CCDC25-204ENST00000519509 MUTYHQ9UIF7 546 aa11.21□□□□□ -0.61
CCDC25-204ENST00000519509 VPS13AQ96RL7 3174 aa11.21□□□□□ -0.62
CCDC25-204ENST00000519509 A6NJR5 290 aa11.2□□□□□ -0.62
CCDC25-204ENST00000519509 GSG1L2A8MUP6 293 aa11.2□□□□□ -0.62
CCDC25-204ENST00000519509 SELPP16109 830 aa11.2□□□□□ -0.62
CCDC25-204ENST00000519509 LTBRP36941 435 aa11.2□□□□□ -0.62
CCDC25-204ENST00000519509 STAT2P52630 851 aa11.2□□□□□ -0.62
CCDC25-204ENST00000519509 PTPN5P54829 565 aa11.2□□□□□ -0.62
CCDC25-204ENST00000519509 PTGISQ16647 500 aa11.2□□□□□ -0.62
CCDC25-204ENST00000519509 ZKSCAN2Q63HK3 967 aa11.2□□□□□ -0.62
CCDC25-204ENST00000519509 GDF6Q6KF10 455 aaPredicted RBP11.2□□□□□ -0.62
CCDC25-204ENST00000519509 LRRC8DQ7L1W4 858 aa11.2□□□□□ -0.62
CCDC25-204ENST00000519509 CAGE1Q8TC20 777 aa11.2□□□□□ -0.62
CCDC25-204ENST00000519509 ZDBF2Q9HCK1 2354 aa11.2□□□□□ -0.62
CCDC25-204ENST00000519509 ABHD14A-ACY1A0A1B0GW23 586 aa11.19□□□□□ -0.62
CCDC25-204ENST00000519509 PRDM1O75626 825 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms