RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 MSANTD4Q8NCY6 345 aa20.52■□□□□ 0.88
SDC2-202ENST00000518385 MTMR8Q96EF0 704 aa20.52■□□□□ 0.88
SDC2-202ENST00000518385 L3MBTL3Q96JM7 780 aaPredicted RBP20.52■□□□□ 0.88
SDC2-202ENST00000518385 ACBD3Q9H3P7 528 aa20.52■□□□□ 0.88
SDC2-202ENST00000518385 INTS13Q9NVM9 706 aa20.52■□□□□ 0.88
SDC2-202ENST00000518385 RAB21Q9UL25 225 aa20.52■□□□□ 0.88
SDC2-202ENST00000518385 SCAF8Q9UPN6 1271 aaKnown RBP20.52■□□□□ 0.88
SDC2-202ENST00000518385 NFE2L3Q9Y4A8 694 aa20.52■□□□□ 0.88
SDC2-202ENST00000518385 ANGEL2Q5VTE6 544 aaKnown RBP20.51■□□□□ 0.87
SDC2-202ENST00000518385 PPFIBP1Q86W92 1011 aa20.51■□□□□ 0.87
SDC2-202ENST00000518385 CNGA4Q8IV77 575 aa20.51■□□□□ 0.87
SDC2-202ENST00000518385 LRRN4CLQ8ND94 238 aa20.51■□□□□ 0.87
SDC2-202ENST00000518385 SYMPKQ92797 1274 aaKnown RBP20.51■□□□□ 0.87
SDC2-202ENST00000518385 UBA5Q9GZZ9 404 aa20.51■□□□□ 0.87
SDC2-202ENST00000518385 MYH4Q9Y623 1939 aa20.51■□□□□ 0.87
SDC2-202ENST00000518385 WNT7AO00755 349 aa20.51■□□□□ 0.87
SDC2-202ENST00000518385 MAP2K7O14733 419 aa20.51■□□□□ 0.87
SDC2-202ENST00000518385 OAS2P29728 719 aaKnown RBP20.51■□□□□ 0.87
SDC2-202ENST00000518385 SPATA1Q5VX52 437 aa20.51■□□□□ 0.87
SDC2-202ENST00000518385 MIGA2Q7L4E1 593 aa20.51■□□□□ 0.87
SDC2-202ENST00000518385 SH3RF1Q7Z6J0 888 aa20.51■□□□□ 0.87
SDC2-202ENST00000518385 GMCL1P1Q8NEA9 526 aa20.51■□□□□ 0.87
SDC2-202ENST00000518385 VAT1LQ9HCJ6 419 aa20.51■□□□□ 0.87
SDC2-202ENST00000518385 CDC23Q9UJX2 597 aa20.51■□□□□ 0.87
SDC2-202ENST00000518385 TMEM232C9JQI7 657 aa20.5■□□□□ 0.87
SDC2-202ENST00000518385 GDF11O95390 407 aa20.5■□□□□ 0.87
SDC2-202ENST00000518385 JAG1P78504 1218 aa20.5■□□□□ 0.87
SDC2-202ENST00000518385 SPAG1Q07617 926 aa20.5■□□□□ 0.87
SDC2-202ENST00000518385 SEMA3FQ13275 785 aa20.5■□□□□ 0.87
SDC2-202ENST00000518385 SEPT2Q15019 361 aa20.5■□□□□ 0.87
SDC2-202ENST00000518385 SHROOM1Q2M3G4 852 aaPredicted RBP20.5■□□□□ 0.87
SDC2-202ENST00000518385 DTHD1Q6ZMT9 781 aa20.5■□□□□ 0.87
SDC2-202ENST00000518385 HDXQ7Z353 690 aa20.5■□□□□ 0.87
SDC2-202ENST00000518385 REXO1Q8N1G1 1221 aaKnown RBP20.5■□□□□ 0.87
SDC2-202ENST00000518385 GOLGA5Q8TBA6 731 aa20.5■□□□□ 0.87
SDC2-202ENST00000518385 EPSTI1Q96J88 318 aa20.5■□□□□ 0.87
SDC2-202ENST00000518385 FUT8Q9BYC5 575 aa20.5■□□□□ 0.87
SDC2-202ENST00000518385 PARD6BQ9BYG5 372 aa20.5■□□□□ 0.87
SDC2-202ENST00000518385 JMJD4Q9H9V9 463 aa20.5■□□□□ 0.87
SDC2-202ENST00000518385 FRMPD2Q68DX3 1309 aaPredicted RBP20.49■□□□□ 0.87
SDC2-202ENST00000518385 SRCAPQ6ZRS2 3230 aa20.49■□□□□ 0.87
SDC2-202ENST00000518385 GLTPD2A6NH11 291 aa20.49■□□□□ 0.87
SDC2-202ENST00000518385 GH2P01242 217 aa20.49■□□□□ 0.87
SDC2-202ENST00000518385 EEF2P13639 858 aaKnown RBP20.49■□□□□ 0.87
SDC2-202ENST00000518385 MCM3P25205 808 aa20.49■□□□□ 0.87
SDC2-202ENST00000518385 WHAMMP3Q1A5X7 153 aa20.49■□□□□ 0.87
SDC2-202ENST00000518385 USP49Q70CQ1 688 aa20.49■□□□□ 0.87
SDC2-202ENST00000518385 NEK8Q86SG6 692 aa20.49■□□□□ 0.87
SDC2-202ENST00000518385 CLEC10AQ8IUN9 316 aa20.49■□□□□ 0.87
SDC2-202ENST00000518385 SIAH1Q8IUQ4 282 aa20.49■□□□□ 0.87
SDC2-202ENST00000518385 ADGRF4Q8IZF3 695 aa20.49■□□□□ 0.87
SDC2-202ENST00000518385 PDILTQ8N807 584 aa20.49■□□□□ 0.87
SDC2-202ENST00000518385 AK8Q96MA6 479 aa20.49■□□□□ 0.87
SDC2-202ENST00000518385 GPCPD1Q9NPB8 672 aa20.49■□□□□ 0.87
SDC2-202ENST00000518385 GGA3Q9NZ52 723 aa20.49■□□□□ 0.87
SDC2-202ENST00000518385 PITPNM2Q9BZ72 1349 aa20.49■□□□□ 0.87
SDC2-202ENST00000518385 UTRNP46939 3433 aa20.49■□□□□ 0.87
SDC2-202ENST00000518385 ZBTB5O15062 677 aa20.48■□□□□ 0.87
SDC2-202ENST00000518385 IVLP07476 585 aa20.48■□□□□ 0.87
SDC2-202ENST00000518385 ADCY7P51828 1080 aa20.48■□□□□ 0.87
SDC2-202ENST00000518385 CHMP4BP1P59074 171 aa20.48■□□□□ 0.87
SDC2-202ENST00000518385 INF2Q27J81 1249 aa20.48■□□□□ 0.87
SDC2-202ENST00000518385 CCDC96Q2M329 555 aa20.48■□□□□ 0.87
SDC2-202ENST00000518385 RASGRP2Q7LDG7 609 aa20.48■□□□□ 0.87
SDC2-202ENST00000518385 TEX2Q8IWB9 1127 aa20.48■□□□□ 0.87
SDC2-202ENST00000518385 GSDMAQ96QA5 445 aa20.48■□□□□ 0.87
SDC2-202ENST00000518385 CPVLQ9H3G5 476 aa20.48■□□□□ 0.87
SDC2-202ENST00000518385 PPP2R3BQ9Y5P8 575 aa20.48■□□□□ 0.87
SDC2-202ENST00000518385 ADAMTS3O15072 1205 aa20.47■□□□□ 0.87
SDC2-202ENST00000518385 MRPL12P52815 198 aaKnown RBP20.47■□□□□ 0.87
SDC2-202ENST00000518385 HNRNPH2P55795 449 aaKnown RBP20.47■□□□□ 0.87
SDC2-202ENST00000518385 ATP2B2Q01814 1243 aa20.47■□□□□ 0.87
SDC2-202ENST00000518385 ICA1Q05084 483 aa20.47■□□□□ 0.87
SDC2-202ENST00000518385 SLFN13Q68D06 897 aa20.47■□□□□ 0.87
SDC2-202ENST00000518385 MCTP2Q6DN12 878 aa20.47■□□□□ 0.87
SDC2-202ENST00000518385 TMTC1Q8IUR5 882 aa20.47■□□□□ 0.87
SDC2-202ENST00000518385 RASGRP4Q8TDF6 673 aa20.47■□□□□ 0.87
SDC2-202ENST00000518385 DHX58Q96C10 678 aa20.47■□□□□ 0.87
SDC2-202ENST00000518385 GMCL1Q96IK5 515 aa20.47■□□□□ 0.87
SDC2-202ENST00000518385 WDR24Q96S15 920 aa20.47■□□□□ 0.87
SDC2-202ENST00000518385 RIC8AQ9NPQ8 531 aa20.47■□□□□ 0.87
SDC2-202ENST00000518385 ERICH4A6NGS2 130 aa20.46■□□□□ 0.87
SDC2-202ENST00000518385 PHF20L1A8MW92 1017 aa20.46■□□□□ 0.87
SDC2-202ENST00000518385 RPS6KA5O75582 802 aa20.46■□□□□ 0.87
SDC2-202ENST00000518385 BMP6P22004 513 aa20.46■□□□□ 0.87
SDC2-202ENST00000518385 CAP2P40123 477 aa20.46■□□□□ 0.87
SDC2-202ENST00000518385 PBX1P40424 430 aa20.46■□□□□ 0.87
SDC2-202ENST00000518385 LONRF2Q1L5Z9 754 aa20.46■□□□□ 0.87
SDC2-202ENST00000518385 NBPF12Q5TAG4 269 aaPredicted RBP20.46■□□□□ 0.87
SDC2-202ENST00000518385 HOOK2Q96ED9 719 aa20.46■□□□□ 0.87
SDC2-202ENST00000518385 PAGE5Q96GU1 130 aa20.46■□□□□ 0.87
SDC2-202ENST00000518385 NAP1L4Q99733 375 aaKnown RBP20.46■□□□□ 0.87
SDC2-202ENST00000518385 CCSER1Q9C0I3 900 aa20.46■□□□□ 0.87
SDC2-202ENST00000518385 ST7Q9NRC1 585 aa20.46■□□□□ 0.87
SDC2-202ENST00000518385 ADGRG1Q9Y653 693 aa20.46■□□□□ 0.87
SDC2-202ENST00000518385 FANCGO15287 622 aa20.46■□□□□ 0.87
SDC2-202ENST00000518385 MYL1P05976 194 aa20.46■□□□□ 0.87
SDC2-202ENST00000518385 SLC1A4P43007 532 aa20.46■□□□□ 0.87
SDC2-202ENST00000518385 IRX5P78411 483 aaPredicted RBP20.46■□□□□ 0.87
SDC2-202ENST00000518385 E2F4Q16254 413 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms