RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 KIAA1958Q8N8K9 716 aa4.68□□□□□ -1.66
RNU4-60P-201ENST00000517239 PPP1R35Q8TAP8 253 aa4.68□□□□□ -1.66
RNU4-60P-201ENST00000517239 DDX54Q8TDD1 881 aaKnown RBP4.68□□□□□ -1.66
RNU4-60P-201ENST00000517239 RSPH1Q8WYR4 309 aa4.68□□□□□ -1.66
RNU4-60P-201ENST00000517239 HDAC2Q92769 488 aaKnown RBP4.68□□□□□ -1.66
RNU4-60P-201ENST00000517239 RPGRQ92834 1020 aaKnown RBP4.68□□□□□ -1.66
RNU4-60P-201ENST00000517239 SLC5A5Q92911 643 aa4.68□□□□□ -1.66
RNU4-60P-201ENST00000517239 BRF1Q92994 677 aa4.68□□□□□ -1.66
RNU4-60P-201ENST00000517239 ELMO3Q96BJ8 720 aa4.68□□□□□ -1.66
RNU4-60P-201ENST00000517239 MRGPRX3Q96LB0 322 aa4.68□□□□□ -1.66
RNU4-60P-201ENST00000517239 MRGPRX2Q96LB1 330 aa4.68□□□□□ -1.66
RNU4-60P-201ENST00000517239 GBP3Q9H0R5 595 aa4.68□□□□□ -1.66
RNU4-60P-201ENST00000517239 RETREG1Q9H6L5 497 aa4.68□□□□□ -1.66
RNU4-60P-201ENST00000517239 RUBCNLQ9H714 662 aa4.68□□□□□ -1.66
RNU4-60P-201ENST00000517239 GPAMQ9HCL2 828 aa4.68□□□□□ -1.66
RNU4-60P-201ENST00000517239 CABP5Q9NP86 173 aa4.68□□□□□ -1.66
RNU4-60P-201ENST00000517239 KMT5AQ9NQR1 393 aa4.68□□□□□ -1.66
RNU4-60P-201ENST00000517239 CWC25Q9NXE8 425 aaPredicted RBP4.68□□□□□ -1.66
RNU4-60P-201ENST00000517239 TMX2Q9Y320 296 aa4.68□□□□□ -1.66
RNU4-60P-201ENST00000517239 TTLL3Q9Y4R7 772 aa4.68□□□□□ -1.66
RNU4-60P-201ENST00000517239 PCDHA8Q9Y5H6 950 aa4.68□□□□□ -1.66
RNU4-60P-201ENST00000517239 LOC102724428A0A0B4J2F2 783 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 A0A0G2JS52 829 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 RRN3P2A6NIE6 340 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 SPDYE3A6NKU9 549 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 H3BRJ5 948 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 EYA2O00167 538 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 AQP7O14520 342 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 KCNH1O95259 989 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 CNOT4O95628 575 aaKnown RBP4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 RHOQP17081 205 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 ABCB4P21439 1286 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 GRK4P32298 578 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 GBP1P32455 592 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 KRT20P35900 424 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 CTSOP43234 321 aaPredicted RBP4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 PRIM2P49643 509 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 EMP3P54852 163 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 SIK1P57059 783 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 WDR4P57081 412 aaKnown RBP4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 PRKG2Q13237 762 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 SEMA5AQ13591 1074 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 LAMC2Q13753 1193 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 CEP135Q66GS9 1140 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 ITPRIPL1Q6GPH6 555 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 KCNT2Q6UVM3 1135 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 PDZD4Q76G19 769 aaPredicted RBP4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 MTDHQ86UE4 582 aaKnown RBP4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 TRIM59Q8IWR1 403 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 MIER2Q8N344 545 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 CAMKK1Q8N5S9 505 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 ANKLE1Q8NAG6 615 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 ADCY4Q8NFM4 1077 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 DIS3LQ8TF46 1054 aaKnown RBP4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 SECISBP2LQ93073 1101 aaKnown RBP4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 HPS3Q969F9 1004 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 TMEM169Q96HH4 297 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 TMEM87BQ96K49 555 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 UBXN10Q96LJ8 280 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 NELL2Q99435 816 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 SEC62Q99442 399 aaKnown RBP4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 MAP3K14Q99558 947 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 BARD1Q99728 777 aaKnown RBP4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 AP1M1Q9BXS5 423 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 GTPBP4Q9BZE4 634 aaKnown RBP4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 BHMT2Q9H2M3 363 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 SH3GLB2Q9NR46 395 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 DISC1Q9NRI5 854 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 TBC1D22BQ9NU19 505 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 GPRC5BQ9NZH0 403 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 IFT80Q9P2H3 777 aaPredicted RBP4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 B4GALT6Q9UBX8 382 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 FBXO10Q9UK96 956 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 EMC9Q9Y3B6 208 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 ZNF451Q9Y4E5 1061 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 CSADQ9Y600 493 aa4.67□□□□□ -1.66
RNU4-60P-201ENST00000517239 FAM170AA1A519 330 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 DCDC2CA8MYV0 355 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 CBFA2T2O43439 604 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 TIPRLO75663 272 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 MTA2O94776 668 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 GHRHP01286 108 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 SNRPB2P08579 225 aaKnown RBP4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 SRGAP2CP0DJJ0 459 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 TGFB3P10600 412 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 OAS2P29728 719 aaKnown RBP4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 ECI1P42126 302 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 PIK3CBP42338 1070 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 RAD52P43351 418 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 STT3AP46977 705 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 AP3B2Q13367 1082 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 CLEC16AQ2KHT3 1053 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 WDR44Q5JSH3 913 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 ATAT1Q5SQI0 421 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 RNF220Q5VTB9 566 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 GTF2IRD2BQ6EKJ0 949 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 GGT6Q6P531 493 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 LILRA6Q6PI73 481 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 POMZP3Q6PJE2 187 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 VN1R5Q7Z5H4 357 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms