RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 BRD2P25440 801 aaKnown RBP6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 HSPA4P34932 840 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 PABPC4Q13310 644 aaKnown RBP eCLIP6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 DSC3Q14574 896 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 TAF1CQ15572 869 aaPredicted RBP6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 CCDC178Q5BJE1 867 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 TREML2Q5T2D2 321 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 SLFN13Q68D06 897 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 STOX1Q6ZVD7 989 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 CHST3Q7LGC8 479 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 SPICE1Q8N0Z3 855 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 LRRC47Q8N1G4 583 aaKnown RBP6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 FAM43AQ8N2R8 423 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 JMYQ8N9B5 988 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 NAV1Q8NEY1 1877 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 MKL1Q969V6 931 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 MYO19Q96H55 970 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 ZSCAN10Q96SZ4 725 aaPredicted RBP6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 UBAC1Q9BSL1 405 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 TCP11L1Q9NUJ3 509 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 NYAP2Q9P242 653 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 ISY1Q9ULR0 285 aaKnown RBP6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 TMX2Q9Y320 296 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 HCN4Q9Y3Q4 1203 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 TAF6LQ9Y6J9 622 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 FOCADQ5VW36 1801 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 IGKV6D-41A0A0C4DH26 115 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 ERICH2A1L162 156 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 F5H6K3 240 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 IFIT3O14879 490 aaKnown RBP6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 ADH1AP07327 375 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 HSPA1AP0DMV8 641 aaKnown RBP6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 HSPA1BP0DMV9 641 aaKnown RBP6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 CYP2C8P10632 490 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 TOP1P11387 765 aaKnown RBP6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 MCM5P33992 734 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 NOS2P35228 1153 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 SLC19A1P41440 591 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 MAPK8P45983 427 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 NT5C2P49902 561 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 CENPCQ03188 943 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 KLRC3Q07444 240 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 EHHADHQ08426 723 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 KRT32Q14532 448 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 TEAD4Q15561 434 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 FAM26DQ5JW98 314 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 COL13A1Q5TAT6 717 aaPredicted RBP6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 GPAT2Q6NUI2 795 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 CYB5R4Q7L1T6 521 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 ANKRD23Q86SG2 305 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 DGKHQ86XP1 1220 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 KDF1Q8NAX2 398 aaPredicted RBP6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 DMRTB1Q96MA1 342 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 TTC14Q96N46 770 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 NEK1Q96PY6 1258 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 TMEM47Q9BQJ4 181 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 BACH2Q9BYV9 841 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 PRKD2Q9BZL6 878 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 KIAA1683Q9H0B3 1180 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 VCPKMTQ9H867 229 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 ZFYVE28Q9HCC9 887 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 ZNF232Q9UNY5 417 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 AGTPBP1Q9UPW5 1226 aa6.79□□□□□ -1.32
SCARNA6.1-201ENST00000516989 SIPA1L1O43166 1804 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 EML1O00423 815 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 EPB41L2O43491 1005 aaKnown RBP6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 CA12O43570 354 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 NDUFB10O96000 172 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 VCAM1P19320 739 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 PSMA5P28066 241 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 HOXA7P31268 230 aaPredicted RBP6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 SLC1A4P43007 532 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 IRX3P78415 501 aaPredicted RBP6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 FGD1P98174 961 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 CBLBQ13191 982 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 CLN3Q13286 438 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 CRHR2Q13324 411 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 MOGSQ13724 837 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 MRPL58Q14197 206 aaKnown RBP6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 COG2Q14746 738 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 WTAPQ15007 396 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 SART3Q15020 963 aaKnown RBP6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 C11orf91Q3C1V1 193 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 ADCK5Q3MIX3 580 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 C8orf34Q49A92 452 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 TMEM67Q5HYA8 995 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 KIAA1755Q5JYT7 1200 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 IFIT1BQ5T764 474 aaKnown RBP6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 SH3PXD2AQ5TCZ1 1133 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 POTEGQ6S5H5 508 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 CATSPERGQ6ZRH7 1159 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 DHX32Q7L7V1 743 aaKnown RBP6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 ATCAYQ86WG3 371 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 MB21D2Q8IYB1 491 aaPredicted RBP6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 ALDH16A1Q8IZ83 802 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 SMCR8Q8TEV9 937 aaPredicted RBP6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 ZDHHC1Q8WTX9 485 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 LPAR1Q92633 364 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 KCNB2Q92953 911 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 C12orf42Q96LP6 360 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms