RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 TFRCP02786 760 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-232ENST00000514755 USP46P62068 366 aa12.86□□□□□ -0.35
UBE2D3-232ENST00000514755 TROAPQ12815 778 aa12.86□□□□□ -0.35
UBE2D3-232ENST00000514755 CDC37Q16543 378 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-232ENST00000514755 KMT5BQ4FZB7 885 aa12.86□□□□□ -0.35
UBE2D3-232ENST00000514755 ASPRV1Q53RT3 343 aa12.86□□□□□ -0.35
UBE2D3-232ENST00000514755 ANO1Q5XXA6 986 aa12.86□□□□□ -0.35
UBE2D3-232ENST00000514755 TCEANC2Q96MN5 208 aa12.86□□□□□ -0.35
UBE2D3-232ENST00000514755 TINF2Q9BSI4 451 aa12.86□□□□□ -0.35
UBE2D3-232ENST00000514755 MYL10Q9BUA6 226 aa12.86□□□□□ -0.35
UBE2D3-232ENST00000514755 PRR14Q9BWN1 585 aa12.86□□□□□ -0.35
UBE2D3-232ENST00000514755 VAT1LQ9HCJ6 419 aa12.86□□□□□ -0.35
UBE2D3-232ENST00000514755 SLC5A4Q9NY91 659 aa12.86□□□□□ -0.35
UBE2D3-232ENST00000514755 FBXO40Q9UH90 709 aa12.86□□□□□ -0.35
UBE2D3-232ENST00000514755 OGDHLQ9ULD0 1010 aa12.86□□□□□ -0.35
UBE2D3-232ENST00000514755 DIS3Q9Y2L1 958 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-232ENST00000514755 ASTN1O14525 1302 aa12.86□□□□□ -0.35
UBE2D3-232ENST00000514755 ERICH2A1L162 156 aa12.85□□□□□ -0.35
UBE2D3-232ENST00000514755 PALM3A6NDB9 673 aaPredicted RBP12.85□□□□□ -0.35
UBE2D3-232ENST00000514755 SNAI1O95863 264 aaPredicted RBP12.85□□□□□ -0.35
UBE2D3-232ENST00000514755 CNGA1P29973 690 aa12.85□□□□□ -0.35
UBE2D3-232ENST00000514755 MCM5P33992 734 aa12.85□□□□□ -0.35
UBE2D3-232ENST00000514755 GRM4Q14833 912 aa12.85□□□□□ -0.35
UBE2D3-232ENST00000514755 TKFCQ3LXA3 575 aa12.85□□□□□ -0.35
UBE2D3-232ENST00000514755 RAB11FIP4Q86YS3 637 aa12.85□□□□□ -0.35
UBE2D3-232ENST00000514755 FAM133AQ8N9E0 248 aa12.85□□□□□ -0.35
UBE2D3-232ENST00000514755 CLEC4DQ8WXI8 215 aa12.85□□□□□ -0.35
UBE2D3-232ENST00000514755 JMJD4Q9H9V9 463 aa12.85□□□□□ -0.35
UBE2D3-232ENST00000514755 MCM3APO60318 1980 aa12.85□□□□□ -0.35
UBE2D3-232ENST00000514755 TNRC18O15417 2968 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-232ENST00000514755 KLRF2D3W0D1 207 aa12.84□□□□□ -0.35
UBE2D3-232ENST00000514755 ACTN4O43707 911 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-232ENST00000514755 CYTH3O43739 400 aa12.84□□□□□ -0.35
UBE2D3-232ENST00000514755 FARP2O94887 1054 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-232ENST00000514755 ZNF865P0CJ78 1059 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-232ENST00000514755 CPA1P15085 419 aa12.84□□□□□ -0.35
UBE2D3-232ENST00000514755 RXRAP19793 462 aa12.84□□□□□ -0.35
UBE2D3-232ENST00000514755 HSPA4P34932 840 aa12.84□□□□□ -0.35
UBE2D3-232ENST00000514755 SART3Q15020 963 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-232ENST00000514755 QRICH1Q2TAL8 776 aa12.84□□□□□ -0.35
UBE2D3-232ENST00000514755 TSGA10IPQ3SY00 556 aa12.84□□□□□ -0.35
UBE2D3-232ENST00000514755 USH1GQ495M9 461 aa12.84□□□□□ -0.35
UBE2D3-232ENST00000514755 MYSM1Q5VVJ2 828 aa12.84□□□□□ -0.35
UBE2D3-232ENST00000514755 NSMFQ6X4W1 530 aa12.84□□□□□ -0.35
UBE2D3-232ENST00000514755 NYAP1Q6ZVC0 841 aa12.84□□□□□ -0.35
UBE2D3-232ENST00000514755 NUP133Q8WUM0 1156 aa12.84□□□□□ -0.35
UBE2D3-232ENST00000514755 KCNB2Q92953 911 aa12.84□□□□□ -0.35
UBE2D3-232ENST00000514755 PAWRQ96IZ0 340 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-232ENST00000514755 NEK1Q96PY6 1258 aa12.84□□□□□ -0.35
UBE2D3-232ENST00000514755 CYP39A1Q9NYL5 469 aa12.84□□□□□ -0.35
UBE2D3-232ENST00000514755 DDX20Q9UHI6 824 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-232ENST00000514755 WDR19Q8NEZ3 1342 aa12.84□□□□□ -0.35
UBE2D3-232ENST00000514755 DHX16O60231 1041 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-232ENST00000514755 PPP1R11O60927 126 aaPredicted RBP12.83□□□□□ -0.36
UBE2D3-232ENST00000514755 EXOSC10Q01780 885 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-232ENST00000514755 BAATQ14032 418 aaPredicted RBP12.83□□□□□ -0.36
UBE2D3-232ENST00000514755 RNF20Q5VTR2 975 aa12.83□□□□□ -0.36
UBE2D3-232ENST00000514755 MAMDC4Q6UXC1 1216 aa12.83□□□□□ -0.36
UBE2D3-232ENST00000514755 SLC30A10Q6XR72 485 aa12.83□□□□□ -0.36
UBE2D3-232ENST00000514755 CCDC144CPQ8IYA2 1237 aa12.83□□□□□ -0.36
UBE2D3-232ENST00000514755 ZNF654Q8IZM8 581 aa12.83□□□□□ -0.36
UBE2D3-232ENST00000514755 TBC1D5Q92609 795 aa12.83□□□□□ -0.36
UBE2D3-232ENST00000514755 LENG1Q96BZ8 264 aaPredicted RBP12.83□□□□□ -0.36
UBE2D3-232ENST00000514755 MTMR8Q96EF0 704 aa12.83□□□□□ -0.36
UBE2D3-232ENST00000514755 TMEM87BQ96K49 555 aa12.83□□□□□ -0.36
UBE2D3-232ENST00000514755 SNX14Q9Y5W7 946 aa12.83□□□□□ -0.36
UBE2D3-232ENST00000514755 BAZ2BQ9UIF8 2168 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-232ENST00000514755 MYH6P13533 1939 aa12.82□□□□□ -0.36
UBE2D3-232ENST00000514755 SEPT4O43236 478 aa12.82□□□□□ -0.36
UBE2D3-232ENST00000514755 ARMCX2Q7L311 632 aa12.82□□□□□ -0.36
UBE2D3-232ENST00000514755 CATIPQ7Z7H3 387 aa12.82□□□□□ -0.36
UBE2D3-232ENST00000514755 CMTR1Q8N1G2 835 aaKnown RBP12.82□□□□□ -0.36
UBE2D3-232ENST00000514755 RNF166Q96A37 237 aaPredicted RBP12.82□□□□□ -0.36
UBE2D3-232ENST00000514755 PIGSQ96S52 555 aa12.82□□□□□ -0.36
UBE2D3-232ENST00000514755 MTA3Q9BTC8 594 aa12.82□□□□□ -0.36
UBE2D3-232ENST00000514755 KATNBL1Q9H079 304 aa12.82□□□□□ -0.36
UBE2D3-232ENST00000514755 SYNGAP1Q96PV0 1343 aa12.82□□□□□ -0.36
UBE2D3-232ENST00000514755 PTPDC1A2A3K4 754 aa12.81□□□□□ -0.36
UBE2D3-232ENST00000514755 ADCY6O43306 1168 aa12.81□□□□□ -0.36
UBE2D3-232ENST00000514755 HOXA2O43364 376 aa12.81□□□□□ -0.36
UBE2D3-232ENST00000514755 PLEKHA8P1O95397 391 aa12.81□□□□□ -0.36
UBE2D3-232ENST00000514755 CALML3P27482 149 aa12.81□□□□□ -0.36
UBE2D3-232ENST00000514755 LIFRP42702 1097 aa12.81□□□□□ -0.36
UBE2D3-232ENST00000514755 RPS6P62753 249 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-232ENST00000514755 FUT2Q10981 343 aa12.81□□□□□ -0.36
UBE2D3-232ENST00000514755 NFXL1Q6ZNB6 911 aa12.81□□□□□ -0.36
UBE2D3-232ENST00000514755 DHX32Q7L7V1 743 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-232ENST00000514755 HOMER1Q86YM7 354 aa12.81□□□□□ -0.36
UBE2D3-232ENST00000514755 MSL3Q8N5Y2 521 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-232ENST00000514755 PIBF1Q8WXW3 757 aa12.81□□□□□ -0.36
UBE2D3-232ENST00000514755 RIOX1Q9H6W3 641 aa12.81□□□□□ -0.36
UBE2D3-232ENST00000514755 ZHX1Q9UKY1 873 aaPredicted RBP12.81□□□□□ -0.36
UBE2D3-232ENST00000514755 BRPF3Q9ULD4 1205 aa12.81□□□□□ -0.36
UBE2D3-232ENST00000514755 ALPK3Q96L96 1907 aa12.81□□□□□ -0.36
UBE2D3-232ENST00000514755 PFASO15067 1338 aa12.81□□□□□ -0.36
UBE2D3-232ENST00000514755 PDE4DIPQ5VU43 2346 aa12.8□□□□□ -0.36
UBE2D3-232ENST00000514755 LRRC37A2A6NM11 1700 aa12.8□□□□□ -0.36
UBE2D3-232ENST00000514755 CCDC69A6NI79 296 aa12.8□□□□□ -0.36
UBE2D3-232ENST00000514755 OPLAHO14841 1288 aa12.8□□□□□ -0.36
UBE2D3-232ENST00000514755 DDAH1O94760 285 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms