RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 HSPA1LP34931 641 aa9.04□□□□□ -0.96
RFC1-213ENST00000512275 PREPP48147 710 aa9.04□□□□□ -0.96
RFC1-213ENST00000512275 TDRD10Q5VZ19 366 aaKnown RBP9.04□□□□□ -0.96
RFC1-213ENST00000512275 SYNPOQ8N3V7 929 aa9.04□□□□□ -0.96
RFC1-213ENST00000512275 ZBTB38Q8NAP3 1195 aaPredicted RBP9.04□□□□□ -0.96
RFC1-213ENST00000512275 DNAJB8Q8NHS0 232 aa9.04□□□□□ -0.96
RFC1-213ENST00000512275 PLEKHF1Q96S99 279 aa9.04□□□□□ -0.96
RFC1-213ENST00000512275 HAUS7Q99871 368 aa9.04□□□□□ -0.96
RFC1-213ENST00000512275 IFT57Q9NWB7 429 aa9.04□□□□□ -0.96
RFC1-213ENST00000512275 LRP6O75581 1613 aa9.03□□□□□ -0.96
RFC1-213ENST00000512275 ANKRD34BA5PLL1 514 aa9.03□□□□□ -0.96
RFC1-213ENST00000512275 IQCA1LA6NCM1 817 aa9.03□□□□□ -0.96
RFC1-213ENST00000512275 RNGTTO60942 597 aaKnown RBP9.03□□□□□ -0.96
RFC1-213ENST00000512275 CLEC3AO75596 197 aa9.03□□□□□ -0.96
RFC1-213ENST00000512275 GBP1P32455 592 aa9.03□□□□□ -0.96
RFC1-213ENST00000512275 GYS2P54840 703 aa9.03□□□□□ -0.96
RFC1-213ENST00000512275 ZC3H12BQ5HYM0 836 aaKnown RBP9.03□□□□□ -0.96
RFC1-213ENST00000512275 ZMYM1Q5SVZ6 1142 aa9.03□□□□□ -0.96
RFC1-213ENST00000512275 AXDND1Q5T1B0 1012 aaPredicted RBP9.03□□□□□ -0.96
RFC1-213ENST00000512275 ZNF513Q8N8E2 541 aaPredicted RBP9.03□□□□□ -0.96
RFC1-213ENST00000512275 MFSD2AQ8NA29 543 aa9.03□□□□□ -0.96
RFC1-213ENST00000512275 PHACTR3Q96KR7 559 aa9.03□□□□□ -0.96
RFC1-213ENST00000512275 KLHL25Q9H0H3 589 aa9.03□□□□□ -0.96
RFC1-213ENST00000512275 SLKQ9H2G2 1235 aaPredicted RBP9.03□□□□□ -0.96
RFC1-213ENST00000512275 PNNQ9H307 717 aaKnown RBP9.03□□□□□ -0.96
RFC1-213ENST00000512275 PCOLCE2Q9UKZ9 415 aa9.03□□□□□ -0.96
RFC1-213ENST00000512275 NCAPD2Q15021 1401 aa9.03□□□□□ -0.96
RFC1-213ENST00000512275 PKD1L3Q7Z443 1732 aa9.02□□□□□ -0.96
RFC1-213ENST00000512275 FAM83GA6ND36 823 aa9.02□□□□□ -0.97
RFC1-213ENST00000512275 DNAJC6O75061 913 aa9.02□□□□□ -0.97
RFC1-213ENST00000512275 EPHX1P07099 455 aa9.02□□□□□ -0.97
RFC1-213ENST00000512275 NAT2P11245 290 aa9.02□□□□□ -0.97
RFC1-213ENST00000512275 TCEA2Q15560 299 aa9.02□□□□□ -0.97
RFC1-213ENST00000512275 FILIP1Q7Z7B0 1213 aa9.02□□□□□ -0.97
RFC1-213ENST00000512275 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.02□□□□□ -0.97
RFC1-213ENST00000512275 LENG1Q96BZ8 264 aaPredicted RBP9.02□□□□□ -0.97
RFC1-213ENST00000512275 VWCEQ96DN2 955 aa9.02□□□□□ -0.97
RFC1-213ENST00000512275 SHANK3Q9BYB0 1731 aa9.02□□□□□ -0.97
RFC1-213ENST00000512275 MEGF6O75095 1541 aa9.01□□□□□ -0.97
RFC1-213ENST00000512275 A0A1W2PQU0 124 aa9.01□□□□□ -0.97
RFC1-213ENST00000512275 ALX3O95076 343 aa9.01□□□□□ -0.97
RFC1-213ENST00000512275 CAPNS1P04632 268 aa9.01□□□□□ -0.97
RFC1-213ENST00000512275 TP53P04637 393 aaPredicted RBP9.01□□□□□ -0.97
RFC1-213ENST00000512275 CDK11BP21127 795 aaKnown RBP9.01□□□□□ -0.97
RFC1-213ENST00000512275 TMPOP42166 694 aaKnown RBP9.01□□□□□ -0.97
RFC1-213ENST00000512275 AKTIPQ9H8T0 292 aa9.01□□□□□ -0.97
RFC1-213ENST00000512275 SPC25Q9HBM1 224 aa9.01□□□□□ -0.97
RFC1-213ENST00000512275 ARHGEF4Q9NR80 690 aa9.01□□□□□ -0.97
RFC1-213ENST00000512275 FAM86C1Q9NVL1 165 aa9.01□□□□□ -0.97
RFC1-213ENST00000512275 BTG4Q9NY30 223 aa9.01□□□□□ -0.97
RFC1-213ENST00000512275 LRRC37A3O60309 1634 aa9.01□□□□□ -0.97
RFC1-213ENST00000512275 WDR17Q8IZU2 1322 aa9.01□□□□□ -0.97
RFC1-213ENST00000512275 C9orf172C9J069 976 aa9□□□□□ -0.97
RFC1-213ENST00000512275 SHOXO15266 292 aa9□□□□□ -0.97
RFC1-213ENST00000512275 DYRK3O43781 588 aa9□□□□□ -0.97
RFC1-213ENST00000512275 ASMTLO95671 621 aa9□□□□□ -0.97
RFC1-213ENST00000512275 RIPK4P57078 832 aa9□□□□□ -0.97
RFC1-213ENST00000512275 ANKRD39Q53RE8 183 aa9□□□□□ -0.97
RFC1-213ENST00000512275 NBPF12Q5TAG4 269 aaPredicted RBP9□□□□□ -0.97
RFC1-213ENST00000512275 FOXB2Q5VYV0 432 aa9□□□□□ -0.97
RFC1-213ENST00000512275 ZCRB1Q8TBF4 217 aaKnown RBP9□□□□□ -0.97
RFC1-213ENST00000512275 XAGE3Q8WTP9 111 aa9□□□□□ -0.97
RFC1-213ENST00000512275 FAM46AQ96IP4 442 aaKnown RBP9□□□□□ -0.97
RFC1-213ENST00000512275 APEX2Q9UBZ4 518 aa9□□□□□ -0.97
RFC1-213ENST00000512275 CEP131Q9UPN4 1083 aa9□□□□□ -0.97
RFC1-213ENST00000512275 COL4A3BPQ9Y5P4 624 aa9□□□□□ -0.97
RFC1-213ENST00000512275 ZNF521Q96K83 1311 aa9□□□□□ -0.97
RFC1-213ENST00000512275 TNKS1BP1Q9C0C2 1729 aaKnown RBP9□□□□□ -0.97
RFC1-213ENST00000512275 PPP1R12AO14974 1030 aaPredicted RBP8.99□□□□□ -0.97
RFC1-213ENST00000512275 EVA1CP58658 441 aa8.99□□□□□ -0.97
RFC1-213ENST00000512275 ADGRE1Q14246 886 aa8.99□□□□□ -0.97
RFC1-213ENST00000512275 MBTPS1Q14703 1052 aa8.99□□□□□ -0.97
RFC1-213ENST00000512275 DALRD3Q5D0E6 543 aaKnown RBP8.99□□□□□ -0.97
RFC1-213ENST00000512275 DCAF15Q66K64 600 aa8.99□□□□□ -0.97
RFC1-213ENST00000512275 HEATR6Q6AI08 1181 aaKnown RBP8.99□□□□□ -0.97
RFC1-213ENST00000512275 CDPF1Q6NVV7 123 aa8.99□□□□□ -0.97
RFC1-213ENST00000512275 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.99□□□□□ -0.97
RFC1-213ENST00000512275 TOM1L2Q6ZVM7 507 aa8.99□□□□□ -0.97
RFC1-213ENST00000512275 EZH1Q92800 747 aaPredicted RBP8.99□□□□□ -0.97
RFC1-213ENST00000512275 ZNF512BQ96KM6 892 aaPredicted RBP8.99□□□□□ -0.97
RFC1-213ENST00000512275 APBA2Q99767 749 aa8.99□□□□□ -0.97
RFC1-213ENST00000512275 CEP41Q9BYV8 373 aa8.99□□□□□ -0.97
RFC1-213ENST00000512275 SEMA6CQ9H3T2 930 aa8.99□□□□□ -0.97
RFC1-213ENST00000512275 SSU72Q9NP77 194 aaKnown RBP8.99□□□□□ -0.97
RFC1-213ENST00000512275 NOP58Q9Y2X3 529 aaKnown RBP8.99□□□□□ -0.97
RFC1-213ENST00000512275 CD2APQ9Y5K6 639 aa8.99□□□□□ -0.97
RFC1-213ENST00000512275 SCN11AQ9UI33 1791 aa8.99□□□□□ -0.97
RFC1-213ENST00000512275 CRB1P82279 1406 aa8.98□□□□□ -0.97
RFC1-213ENST00000512275 RAB6AP20340 208 aa8.98□□□□□ -0.97
RFC1-213ENST00000512275 MASP1P48740 699 aa8.98□□□□□ -0.97
RFC1-213ENST00000512275 MTHFSDQ2M296 383 aaKnown RBP8.98□□□□□ -0.97
RFC1-213ENST00000512275 SV2CQ496J9 727 aa8.98□□□□□ -0.97
RFC1-213ENST00000512275 KISS1RQ969F8 398 aaPredicted RBP8.98□□□□□ -0.97
RFC1-213ENST00000512275 EXOC2Q96KP1 924 aa8.98□□□□□ -0.97
RFC1-213ENST00000512275 KREMEN1Q96MU8 473 aa8.98□□□□□ -0.97
RFC1-213ENST00000512275 THUMPD2Q9BTF0 503 aaKnown RBP8.98□□□□□ -0.97
RFC1-213ENST00000512275 PCDH12Q9NPG4 1184 aa8.98□□□□□ -0.97
RFC1-213ENST00000512275 PLAAQ9Y263 795 aa8.98□□□□□ -0.97
RFC1-213ENST00000512275 SLIT2O94813 1529 aa8.98□□□□□ -0.97
RFC1-213ENST00000512275 SPATA31A6Q5VVP1 1343 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms