RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 CCDC82Q8N4S0 544 aa27.94■■■□□ 2.06
SRPK1-210ENST00000508473 PCSK9Q8NBP7 692 aaKnown RBP27.94■■■□□ 2.06
SRPK1-210ENST00000508473 STARD7Q9NQZ5 370 aa27.94■■■□□ 2.06
SRPK1-210ENST00000508473 RBM27Q9P2N5 1060 aaKnown RBP27.94■■■□□ 2.06
SRPK1-210ENST00000508473 SMARCA1P28370 1054 aa27.93■■■□□ 2.06
SRPK1-210ENST00000508473 FGD1P98174 961 aa27.93■■■□□ 2.06
SRPK1-210ENST00000508473 APOA5Q6Q788 366 aa27.93■■■□□ 2.06
SRPK1-210ENST00000508473 SEC63Q9UGP8 760 aaKnown RBP27.93■■■□□ 2.06
SRPK1-210ENST00000508473 hCG_1642624A0A1W2PR95 340 aa27.92■■■□□ 2.06
SRPK1-210ENST00000508473 RBM47A0AV96 593 aaKnown RBP27.92■■■□□ 2.06
SRPK1-210ENST00000508473 FSCN1Q16658 493 aaKnown RBP27.92■■■□□ 2.06
SRPK1-210ENST00000508473 DUSP28Q4G0W2 176 aa27.92■■■□□ 2.06
SRPK1-210ENST00000508473 TMTC3Q6ZXV5 915 aa27.92■■■□□ 2.06
SRPK1-210ENST00000508473 VTI1AQ96AJ9 217 aa27.92■■■□□ 2.06
SRPK1-210ENST00000508473 NAP1L2Q9ULW6 460 aaPredicted RBP27.92■■■□□ 2.06
SRPK1-210ENST00000508473 KLF18A0A0U1RQI7 1052 aa27.91■■■□□ 2.06
SRPK1-210ENST00000508473 GCOM1H8Y6P7 765 aaPredicted RBP27.91■■■□□ 2.06
SRPK1-210ENST00000508473 POLR2MP0CAP2 368 aa27.91■■■□□ 2.06
SRPK1-210ENST00000508473 NKX3-2P78367 333 aa27.91■■■□□ 2.06
SRPK1-210ENST00000508473 GHRHRQ02643 423 aa27.91■■■□□ 2.06
SRPK1-210ENST00000508473 BLOC1S2Q6QNY1 142 aa27.91■■■□□ 2.06
SRPK1-210ENST00000508473 GLT1D1Q96MS3 346 aa27.91■■■□□ 2.06
SRPK1-210ENST00000508473 PXMP2Q9NR77 195 aa27.91■■■□□ 2.06
SRPK1-210ENST00000508473 ZBTB43O43298 467 aa27.9■■■□□ 2.06
SRPK1-210ENST00000508473 MAGEA10P43363 369 aaPredicted RBP27.9■■■□□ 2.06
SRPK1-210ENST00000508473 TLE2Q04725 743 aa27.9■■■□□ 2.06
SRPK1-210ENST00000508473 PPP2R5BQ15173 497 aa27.9■■■□□ 2.06
SRPK1-210ENST00000508473 C1orf53Q5VUE5 145 aa27.9■■■□□ 2.06
SRPK1-210ENST00000508473 SEPT14Q6ZU15 432 aa27.9■■■□□ 2.06
SRPK1-210ENST00000508473 Q6ZUG5 572 aa27.9■■■□□ 2.06
SRPK1-210ENST00000508473 FCHSD1Q86WN1 690 aa27.9■■■□□ 2.06
SRPK1-210ENST00000508473 SCFD2Q8WU76 684 aa27.9■■■□□ 2.06
SRPK1-210ENST00000508473 IWS1Q96ST2 819 aa27.9■■■□□ 2.06
SRPK1-210ENST00000508473 PRDM5Q9NQX1 630 aaPredicted RBP27.9■■■□□ 2.06
SRPK1-210ENST00000508473 Q9Y3F1 56 aa27.9■■■□□ 2.06
SRPK1-210ENST00000508473 PQBP1O60828 265 aaKnown RBP27.89■■■□□ 2.06
SRPK1-210ENST00000508473 NR3C2P08235 984 aa27.89■■■□□ 2.06
SRPK1-210ENST00000508473 STXBP2Q15833 593 aa27.89■■■□□ 2.06
SRPK1-210ENST00000508473 CXCL17Q6UXB2 119 aa27.89■■■□□ 2.06
SRPK1-210ENST00000508473 COPS5Q92905 334 aa27.89■■■□□ 2.06
SRPK1-210ENST00000508473 USP26Q9BXU7 913 aa27.89■■■□□ 2.06
SRPK1-210ENST00000508473 PRO3102Q9H379 93 aa27.89■■■□□ 2.06
SRPK1-210ENST00000508473 MAP3K20Q9NYL2 800 aaKnown RBP27.89■■■□□ 2.06
SRPK1-210ENST00000508473 PRKAG2Q9UGJ0 569 aa27.89■■■□□ 2.06
SRPK1-210ENST00000508473 ARIH2O95376 493 aa27.88■■■□□ 2.05
SRPK1-210ENST00000508473 TXNP10599 105 aaKnown RBP27.88■■■□□ 2.05
SRPK1-210ENST00000508473 MDM2Q00987 491 aaPredicted RBP27.88■■■□□ 2.05
SRPK1-210ENST00000508473 RTN1Q16799 776 aa27.88■■■□□ 2.05
SRPK1-210ENST00000508473 SAMD3Q8N6K7 520 aa27.88■■■□□ 2.05
SRPK1-210ENST00000508473 OR6J1Q8NGC5 347 aa27.88■■■□□ 2.05
SRPK1-210ENST00000508473 GDF15Q99988 308 aa27.88■■■□□ 2.05
SRPK1-210ENST00000508473 GOLGA8AA7E2F4 631 aa27.87■■■□□ 2.05
SRPK1-210ENST00000508473 GOLGA8BA8MQT2 603 aa27.87■■■□□ 2.05
SRPK1-210ENST00000508473 ZEB2O60315 1214 aa27.87■■■□□ 2.05
SRPK1-210ENST00000508473 MYCLP12524 364 aaPredicted RBP27.87■■■□□ 2.05
SRPK1-210ENST00000508473 CASTP20810 708 aaKnown RBP27.87■■■□□ 2.05
SRPK1-210ENST00000508473 RPS6KB1P23443 525 aa27.87■■■□□ 2.05
SRPK1-210ENST00000508473 PSMA5P28066 241 aa27.87■■■□□ 2.05
SRPK1-210ENST00000508473 APOBRQ0VD83 1088 aa27.87■■■□□ 2.05
SRPK1-210ENST00000508473 TTLL4Q14679 1199 aa27.87■■■□□ 2.05
SRPK1-210ENST00000508473 BRF1Q92994 677 aa27.87■■■□□ 2.05
SRPK1-210ENST00000508473 PDCD2LQ9BRP1 358 aa27.87■■■□□ 2.05
SRPK1-210ENST00000508473 RBM28Q9NW13 759 aaKnown RBP27.87■■■□□ 2.05
SRPK1-210ENST00000508473 ELP1O95163 1332 aa27.87■■■□□ 2.05
SRPK1-210ENST00000508473 EPB41L2O43491 1005 aaKnown RBP27.86■■■□□ 2.05
SRPK1-210ENST00000508473 SH3RF1Q7Z6J0 888 aa27.86■■■□□ 2.05
SRPK1-210ENST00000508473 PDLIM7Q9NR12 457 aa27.86■■■□□ 2.05
SRPK1-210ENST00000508473 IL31RAQ8NI17 732 aa27.85■■■□□ 2.05
SRPK1-210ENST00000508473 ZFP91Q96JP5 570 aaPredicted RBP27.85■■■□□ 2.05
SRPK1-210ENST00000508473 A0A0U1RQG5 324 aaPredicted RBP27.84■■■□□ 2.05
SRPK1-210ENST00000508473 NKRFO15226 690 aaKnown RBP eCLIP27.84■■■□□ 2.05
SRPK1-210ENST00000508473 EIF3JO75822 258 aaKnown RBP27.84■■■□□ 2.05
SRPK1-210ENST00000508473 PGM5Q15124 567 aa27.84■■■□□ 2.05
SRPK1-210ENST00000508473 LY6KQ17RY6 165 aa27.84■■■□□ 2.05
SRPK1-210ENST00000508473 USP17L6PQ6QN14 398 aa27.84■■■□□ 2.05
SRPK1-210ENST00000508473 LBHD1Q9BQE6 289 aaPredicted RBP27.84■■■□□ 2.05
SRPK1-210ENST00000508473 FAM217BQ9NTX9 383 aaPredicted RBP27.84■■■□□ 2.05
SRPK1-210ENST00000508473 CNTNAP5Q8WYK1 1306 aa27.84■■■□□ 2.05
SRPK1-210ENST00000508473 TRIOBPQ9H2D6 2365 aa27.84■■■□□ 2.05
SRPK1-210ENST00000508473 TRIM43BA6NCK2 446 aa27.83■■■□□ 2.05
SRPK1-210ENST00000508473 MYL3P08590 195 aa27.83■■■□□ 2.05
SRPK1-210ENST00000508473 CLTBP09497 229 aa27.83■■■□□ 2.05
SRPK1-210ENST00000508473 CDC27P30260 824 aa27.83■■■□□ 2.05
SRPK1-210ENST00000508473 CCDC62Q6P9F0 684 aa27.83■■■□□ 2.05
SRPK1-210ENST00000508473 HEATR3Q7Z4Q2 680 aa27.83■■■□□ 2.05
SRPK1-210ENST00000508473 SMARCC2Q8TAQ2 1214 aa27.83■■■□□ 2.05
SRPK1-210ENST00000508473 GPKOWQ92917 476 aaPredicted RBP eCLIP27.83■■■□□ 2.055e-6■□□□□ 9.6
SRPK1-210ENST00000508473 CUL5Q93034 780 aa27.83■■■□□ 2.05
SRPK1-210ENST00000508473 TRIM43Q96BQ3 446 aaPredicted RBP27.83■■■□□ 2.05
SRPK1-210ENST00000508473 ARVCFO00192 962 aa27.82■■■□□ 2.04
SRPK1-210ENST00000508473 CPT1AP50416 773 aa27.82■■■□□ 2.04
SRPK1-210ENST00000508473 METAP2P50579 478 aaKnown RBP eCLIP27.82■■■□□ 2.04
SRPK1-210ENST00000508473 PSMC6P62333 389 aa27.82■■■□□ 2.04
SRPK1-210ENST00000508473 FUT2Q10981 343 aa27.82■■■□□ 2.04
SRPK1-210ENST00000508473 ANKRD33Q7Z3H0 272 aa27.82■■■□□ 2.04
SRPK1-210ENST00000508473 VSIG10LQ86VR7 867 aa27.82■■■□□ 2.04
SRPK1-210ENST00000508473 UBE2OQ9C0C9 1292 aaKnown RBP27.82■■■□□ 2.04
SRPK1-210ENST00000508473 V9GY48 417 aaPredicted RBP27.82■■■□□ 2.04
SRPK1-210ENST00000508473 DCDC2CA8MYV0 355 aa27.81■■■□□ 2.04
SRPK1-210ENST00000508473 CABYRO75952 493 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms