RNA–Protein interactions for RNA: ENST00000507471.1

TSPAN17-206, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-206ENST00000507471 MPHOSPH6Q99547 160 aaKnown RBP16.29■□□□□ 0.2
TSPAN17-206ENST00000507471 HELLSQ9NRZ9 838 aa16.29■□□□□ 0.2
TSPAN17-206ENST00000507471 XIRP2A4UGR9 3374 aa16.29■□□□□ 0.2
TSPAN17-206ENST00000507471 WDR19Q8NEZ3 1342 aa16.28■□□□□ 0.2
TSPAN17-206ENST00000507471 TCF20Q9UGU0 1960 aaKnown RBP16.28■□□□□ 0.2
TSPAN17-206ENST00000507471 PTPRSQ13332 1948 aa16.28■□□□□ 0.2
TSPAN17-206ENST00000507471 GTPBP6O43824 516 aaPredicted RBP16.28■□□□□ 0.2
TSPAN17-206ENST00000507471 KPNA6O60684 536 aa16.28■□□□□ 0.2
TSPAN17-206ENST00000507471 TXNP10599 105 aaKnown RBP16.28■□□□□ 0.2
TSPAN17-206ENST00000507471 TAP1Q03518 808 aa16.28■□□□□ 0.2
TSPAN17-206ENST00000507471 PTPN11Q06124 597 aaPredicted RBP16.28■□□□□ 0.2
TSPAN17-206ENST00000507471 ZNF543Q08ER8 600 aa16.28■□□□□ 0.2
TSPAN17-206ENST00000507471 AAK1Q2M2I8 961 aa16.28■□□□□ 0.2
TSPAN17-206ENST00000507471 KRT40Q6A162 431 aa16.28■□□□□ 0.2
TSPAN17-206ENST00000507471 RETREG2Q8NC44 543 aa16.28■□□□□ 0.2
TSPAN17-206ENST00000507471 FAM227BQ96M60 508 aa16.28■□□□□ 0.2
TSPAN17-206ENST00000507471 FTOQ9C0B1 505 aaKnown RBP eCLIP16.28■□□□□ 0.24e-8■■■■■ 31.1
TSPAN17-206ENST00000507471 PNMA2Q9UL42 364 aa16.28■□□□□ 0.2
TSPAN17-206ENST00000507471 COL4A4P53420 1690 aaPredicted RBP16.27■□□□□ 0.2
TSPAN17-206ENST00000507471 A0A0D9SFI3 127 aa16.27■□□□□ 0.2
TSPAN17-206ENST00000507471 ARIH2O95376 493 aa16.27■□□□□ 0.2
TSPAN17-206ENST00000507471 SNHG28P0DPA3 235 aa16.27■□□□□ 0.2
TSPAN17-206ENST00000507471 HSPD1P10809 573 aaKnown RBP16.27■□□□□ 0.2
TSPAN17-206ENST00000507471 BFSP2Q13515 415 aa16.27■□□□□ 0.2
TSPAN17-206ENST00000507471 HERC6Q8IVU3 1022 aa16.27■□□□□ 0.2
TSPAN17-206ENST00000507471 ARNTL2Q8WYA1 636 aa16.27■□□□□ 0.2
TSPAN17-206ENST00000507471 ZMYM6O95789 1325 aa16.26■□□□□ 0.19
TSPAN17-206ENST00000507471 MYO9BQ13459 2157 aa16.26■□□□□ 0.19
TSPAN17-206ENST00000507471 HAND2P61296 217 aa16.26■□□□□ 0.19
TSPAN17-206ENST00000507471 USH1GQ495M9 461 aa16.26■□□□□ 0.19
TSPAN17-206ENST00000507471 MCMDC2Q4G0Z9 681 aa16.26■□□□□ 0.19
TSPAN17-206ENST00000507471 TTC14Q96N46 770 aa16.26■□□□□ 0.19
TSPAN17-206ENST00000507471 CTAGE1Q96RT6 745 aa16.26■□□□□ 0.19
TSPAN17-206ENST00000507471 NOD1Q9Y239 953 aa16.26■□□□□ 0.19
TSPAN17-206ENST00000507471 KIF28PB7ZC32 967 aa16.25■□□□□ 0.19
TSPAN17-206ENST00000507471 BAIAP3O94812 1187 aa16.25■□□□□ 0.19
TSPAN17-206ENST00000507471 CHMP4BP1P59074 171 aa16.25■□□□□ 0.19
TSPAN17-206ENST00000507471 PTGISQ16647 500 aa16.25■□□□□ 0.19
TSPAN17-206ENST00000507471 ANKRD45Q5TZF3 282 aa16.25■□□□□ 0.19
TSPAN17-206ENST00000507471 CCDC62Q6P9F0 684 aa16.25■□□□□ 0.19
TSPAN17-206ENST00000507471 SPRED2Q7Z698 418 aa16.25■□□□□ 0.19
TSPAN17-206ENST00000507471 ZNF589Q86UQ0 364 aaPredicted RBP16.25■□□□□ 0.19
TSPAN17-206ENST00000507471 B4DLN1 442 aa16.24■□□□□ 0.19
TSPAN17-206ENST00000507471 TLL1O43897 1013 aa16.24■□□□□ 0.19
TSPAN17-206ENST00000507471 MMP3P08254 477 aa16.24■□□□□ 0.19
TSPAN17-206ENST00000507471 GOLGA8HP0CJ92 632 aa16.24■□□□□ 0.19
TSPAN17-206ENST00000507471 PLA2G5P39877 138 aa16.24■□□□□ 0.19
TSPAN17-206ENST00000507471 MRPL12P52815 198 aaKnown RBP16.24■□□□□ 0.19
TSPAN17-206ENST00000507471 PDE1AP54750 535 aa16.24■□□□□ 0.19
TSPAN17-206ENST00000507471 GRB10Q13322 594 aa16.24■□□□□ 0.19
TSPAN17-206ENST00000507471 GPNMBQ14956 572 aa16.24■□□□□ 0.19
TSPAN17-206ENST00000507471 GPATCH4Q5T3I0 446 aaKnown RBP16.24■□□□□ 0.19
TSPAN17-206ENST00000507471 GDF6Q6KF10 455 aaPredicted RBP16.24■□□□□ 0.19
TSPAN17-206ENST00000507471 TBC1D10CQ8IV04 446 aa16.24■□□□□ 0.19
TSPAN17-206ENST00000507471 CCDC155Q8N6L0 562 aa16.24■□□□□ 0.19
TSPAN17-206ENST00000507471 RGS22Q8NE09 1264 aa16.24■□□□□ 0.19
TSPAN17-206ENST00000507471 CAGE1Q8TC20 777 aa16.24■□□□□ 0.19
TSPAN17-206ENST00000507471 AFG1LQ8WV93 481 aa16.24■□□□□ 0.19
TSPAN17-206ENST00000507471 C1QTNF1Q9BXJ1 281 aa16.24■□□□□ 0.19
TSPAN17-206ENST00000507471 UBA5Q9GZZ9 404 aa16.24■□□□□ 0.19
TSPAN17-206ENST00000507471 CPVLQ9H3G5 476 aa16.24■□□□□ 0.19
TSPAN17-206ENST00000507471 COG5Q9UP83 839 aa16.24■□□□□ 0.19
TSPAN17-206ENST00000507471 PCP11498 1178 aaKnown RBP16.23■□□□□ 0.19
TSPAN17-206ENST00000507471 KCNJ6P48051 423 aa16.23■□□□□ 0.19
TSPAN17-206ENST00000507471 WDR5P61964 334 aaKnown RBP16.23■□□□□ 0.19
TSPAN17-206ENST00000507471 NMIQ13287 307 aaPredicted RBP16.23■□□□□ 0.19
TSPAN17-206ENST00000507471 LY6KQ17RY6 165 aa16.23■□□□□ 0.19
TSPAN17-206ENST00000507471 MFSD6Q6ZSS7 791 aa16.23■□□□□ 0.19
TSPAN17-206ENST00000507471 TMCO2Q7Z6W1 182 aaPredicted RBP16.23■□□□□ 0.19
TSPAN17-206ENST00000507471 SESTD1Q86VW0 696 aa16.23■□□□□ 0.19
TSPAN17-206ENST00000507471 AFAP1L1Q8TED9 768 aa16.23■□□□□ 0.19
TSPAN17-206ENST00000507471 TBC1D5Q92609 795 aa16.23■□□□□ 0.19
TSPAN17-206ENST00000507471 DHX38Q92620 1227 aaKnown RBP16.23■□□□□ 0.19
TSPAN17-206ENST00000507471 KAT2BQ92831 832 aa16.23■□□□□ 0.19
TSPAN17-206ENST00000507471 ZKSCAN3Q9BRR0 538 aa16.23■□□□□ 0.19
TSPAN17-206ENST00000507471 ZBTB47Q9UFB7 747 aaPredicted RBP16.23■□□□□ 0.19
TSPAN17-206ENST00000507471 TET1Q8NFU7 2136 aa16.22■□□□□ 0.19
TSPAN17-206ENST00000507471 NEDD4P46934 1319 aa16.22■□□□□ 0.19
TSPAN17-206ENST00000507471 CCDC171Q6TFL3 1326 aa16.22■□□□□ 0.19
TSPAN17-206ENST00000507471 LCHNA4D1U4 455 aa16.22■□□□□ 0.19
TSPAN17-206ENST00000507471 LPXNO60711 386 aa16.22■□□□□ 0.19
TSPAN17-206ENST00000507471 GH1P01241 217 aa16.22■□□□□ 0.19
TSPAN17-206ENST00000507471 ARHGAP1Q07960 439 aa16.22■□□□□ 0.19
TSPAN17-206ENST00000507471 CDC37Q16543 378 aaPredicted RBP16.22■□□□□ 0.19
TSPAN17-206ENST00000507471 LRRC8DQ7L1W4 858 aa16.22■□□□□ 0.19
TSPAN17-206ENST00000507471 HLA-CQ95604 372 aa16.22■□□□□ 0.19
TSPAN17-206ENST00000507471 TAAR1Q96RJ0 339 aa16.22■□□□□ 0.19
TSPAN17-206ENST00000507471 COL20A1Q9P218 1284 aa16.22■□□□□ 0.19
TSPAN17-206ENST00000507471 KIAA1217Q5T5P2 1943 aa16.21■□□□□ 0.19
TSPAN17-206ENST00000507471 TRIP12Q14669 1992 aaPredicted RBP16.21■□□□□ 0.19
TSPAN17-206ENST00000507471 SELPP16109 830 aa16.21■□□□□ 0.19
TSPAN17-206ENST00000507471 DEFB103AP81534 67 aa16.21■□□□□ 0.19
TSPAN17-206ENST00000507471 RBL2Q08999 1139 aa16.21■□□□□ 0.19
TSPAN17-206ENST00000507471 SEPT14Q6ZU15 432 aa16.21■□□□□ 0.19
TSPAN17-206ENST00000507471 CHST3Q7LGC8 479 aa16.21■□□□□ 0.19
TSPAN17-206ENST00000507471 DGKHQ86XP1 1220 aa16.21■□□□□ 0.19
TSPAN17-206ENST00000507471 TICAM2Q86XR7 235 aa16.21■□□□□ 0.19
TSPAN17-206ENST00000507471 SYTL5Q8TDW5 730 aaPredicted RBP16.21■□□□□ 0.19
TSPAN17-206ENST00000507471 ESR2Q92731 530 aa16.21■□□□□ 0.19
TSPAN17-206ENST00000507471 FAM122AQ96E09 287 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms