RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 HOOK2Q96ED9 719 aa17.59■□□□□ 0.41
SCLT1-208ENST00000506368 ISCA1Q9BUE6 129 aa17.59■□□□□ 0.41
SCLT1-208ENST00000506368 TRIM6Q9C030 488 aaPredicted RBP17.59■□□□□ 0.41
SCLT1-208ENST00000506368 CUEDC2Q9H467 287 aa17.59■□□□□ 0.41
SCLT1-208ENST00000506368 CAPN6Q9Y6Q1 641 aa17.59■□□□□ 0.41
SCLT1-208ENST00000506368 PNPLA7Q6ZV29 1317 aa17.58■□□□□ 0.41
SCLT1-208ENST00000506368 DOCK2Q92608 1830 aa17.58■□□□□ 0.41
SCLT1-208ENST00000506368 LOC102724428A0A0B4J2F2 783 aa17.58■□□□□ 0.4
SCLT1-208ENST00000506368 CES2O00748 559 aa17.58■□□□□ 0.4
SCLT1-208ENST00000506368 IDH1O75874 414 aaKnown RBP17.58■□□□□ 0.4
SCLT1-208ENST00000506368 BRD2P25440 801 aaKnown RBP17.58■□□□□ 0.4
SCLT1-208ENST00000506368 SIK1P57059 783 aa17.58■□□□□ 0.4
SCLT1-208ENST00000506368 KCTD16Q68DU8 428 aa17.58■□□□□ 0.4
SCLT1-208ENST00000506368 TTI2Q6NXR4 508 aa17.58■□□□□ 0.4
SCLT1-208ENST00000506368 CRELD2Q6UXH1 353 aaPredicted RBP17.58■□□□□ 0.4
SCLT1-208ENST00000506368 MAB21L3Q8N8X9 362 aa17.58■□□□□ 0.4
SCLT1-208ENST00000506368 NOX5Q96PH1 765 aa17.58■□□□□ 0.4
SCLT1-208ENST00000506368 MTRQ99707 1265 aa17.58■□□□□ 0.4
SCLT1-208ENST00000506368 UBAC1Q9BSL1 405 aa17.58■□□□□ 0.4
SCLT1-208ENST00000506368 KDM4CQ9H3R0 1056 aa17.58■□□□□ 0.4
SCLT1-208ENST00000506368 GCOM1H8Y6P7 765 aaPredicted RBP17.57■□□□□ 0.4
SCLT1-208ENST00000506368 MYZAPP0CAP1 466 aa17.57■□□□□ 0.4
SCLT1-208ENST00000506368 STAT6P42226 847 aa17.57■□□□□ 0.4
SCLT1-208ENST00000506368 SLC7A5Q01650 507 aa17.57■□□□□ 0.4
SCLT1-208ENST00000506368 PKN1Q16512 942 aa17.57■□□□□ 0.4
SCLT1-208ENST00000506368 COBLL1Q53SF7 1204 aa17.57■□□□□ 0.4
SCLT1-208ENST00000506368 ANKRD20A8PQ5CZ79 823 aa17.57■□□□□ 0.4
SCLT1-208ENST00000506368 AGBL2Q5U5Z8 902 aa17.57■□□□□ 0.4
SCLT1-208ENST00000506368 RSRC1Q96IZ7 334 aaKnown RBP17.57■□□□□ 0.4
SCLT1-208ENST00000506368 SWAP70Q9UH65 585 aa17.57■□□□□ 0.4
SCLT1-208ENST00000506368 GDAQ9Y2T3 454 aa17.57■□□□□ 0.4
SCLT1-208ENST00000506368 B4DLN1 442 aa17.57■□□□□ 0.4
SCLT1-208ENST00000506368 TRAPPC3O43617 180 aa17.57■□□□□ 0.4
SCLT1-208ENST00000506368 CCNE1P24864 410 aa17.57■□□□□ 0.4
SCLT1-208ENST00000506368 KIF11P52732 1056 aa17.57■□□□□ 0.4
SCLT1-208ENST00000506368 MAP3K12Q12852 859 aa17.57■□□□□ 0.4
SCLT1-208ENST00000506368 ITPK1Q13572 414 aa17.57■□□□□ 0.4
SCLT1-208ENST00000506368 CUL1Q13616 776 aa17.57■□□□□ 0.4
SCLT1-208ENST00000506368 TXNRD1Q16881 649 aa17.57■□□□□ 0.4
SCLT1-208ENST00000506368 CCDC84Q86UT8 332 aaPredicted RBP17.57■□□□□ 0.4
SCLT1-208ENST00000506368 PIK3R5Q8WYR1 880 aa17.57■□□□□ 0.4
SCLT1-208ENST00000506368 FAXDC2Q96IV6 333 aa17.57■□□□□ 0.4
SCLT1-208ENST00000506368 CAMKK2Q96RR4 588 aa17.57■□□□□ 0.4
SCLT1-208ENST00000506368 EPB41L4AQ9HCS5 686 aaPredicted RBP17.57■□□□□ 0.4
SCLT1-208ENST00000506368 PIH1D3Q9NQM4 214 aaKnown RBP17.57■□□□□ 0.4
SCLT1-208ENST00000506368 DDX20Q9UHI6 824 aaKnown RBP17.57■□□□□ 0.4
SCLT1-208ENST00000506368 TFR2Q9UP52 801 aa17.57■□□□□ 0.4
SCLT1-208ENST00000506368 SSU72P8A0A1W2PR75 194 aa17.56■□□□□ 0.4
SCLT1-208ENST00000506368 PLSCR1O15162 318 aa17.56■□□□□ 0.4
SCLT1-208ENST00000506368 MGRN1O60291 552 aa17.56■□□□□ 0.4
SCLT1-208ENST00000506368 HEXIM1O94992 359 aaKnown RBP17.56■□□□□ 0.4
SCLT1-208ENST00000506368 PCCAP05165 728 aaPredicted RBP17.56■□□□□ 0.4
SCLT1-208ENST00000506368 SCP2P22307 547 aa17.56■□□□□ 0.4
SCLT1-208ENST00000506368 TNNC1P63316 161 aa17.56■□□□□ 0.4
SCLT1-208ENST00000506368 MTMR3Q13615 1198 aa17.56■□□□□ 0.4
SCLT1-208ENST00000506368 ZNF174Q15697 407 aa17.56■□□□□ 0.4
SCLT1-208ENST00000506368 METTL24Q5JXM2 366 aa17.56■□□□□ 0.4
SCLT1-208ENST00000506368 TLDC1Q6P9B6 456 aa17.56■□□□□ 0.4
SCLT1-208ENST00000506368 CACNA2D3Q8IZS8 1091 aa17.56■□□□□ 0.4
SCLT1-208ENST00000506368 CSGALNACT2Q8N6G5 542 aa17.56■□□□□ 0.4
SCLT1-208ENST00000506368 RBM12Q9NTZ6 932 aaKnown RBP17.56■□□□□ 0.4
SCLT1-208ENST00000506368 CCNL1Q9UK58 526 aaPredicted RBP17.56■□□□□ 0.4
SCLT1-208ENST00000506368 RIPOR2Q9Y4F9 1068 aa17.56■□□□□ 0.4
SCLT1-208ENST00000506368 DUSP10Q9Y6W6 482 aa17.56■□□□□ 0.4
SCLT1-208ENST00000506368 NBPF26B4DH59 902 aa17.56■□□□□ 0.4
SCLT1-208ENST00000506368 GSTA1P08263 222 aa17.56■□□□□ 0.4
SCLT1-208ENST00000506368 CYP27A1Q02318 531 aa17.56■□□□□ 0.4
SCLT1-208ENST00000506368 CDC37Q16543 378 aaPredicted RBP17.56■□□□□ 0.4
SCLT1-208ENST00000506368 NBPF10Q6P3W6 841 aaKnown RBP17.56■□□□□ 0.4
SCLT1-208ENST00000506368 NFRKBQ6P4R8 1299 aa17.56■□□□□ 0.4
SCLT1-208ENST00000506368 NBPF15Q8N660 670 aa17.56■□□□□ 0.4
SCLT1-208ENST00000506368 NUP133Q8WUM0 1156 aa17.56■□□□□ 0.4
SCLT1-208ENST00000506368 STAMQ92783 540 aa17.56■□□□□ 0.4
SCLT1-208ENST00000506368 PCMTD1Q96MG8 357 aaPredicted RBP17.56■□□□□ 0.4
SCLT1-208ENST00000506368 NUCKS1Q9H1E3 243 aaKnown RBP17.56■□□□□ 0.4
SCLT1-208ENST00000506368 CENPHQ9H3R5 247 aa17.56■□□□□ 0.4
SCLT1-208ENST00000506368 DISC1Q9NRI5 854 aa17.56■□□□□ 0.4
SCLT1-208ENST00000506368 NFU1Q9UMS0 254 aa17.56■□□□□ 0.4
SCLT1-208ENST00000506368 ARAP2Q8WZ64 1704 aa17.55■□□□□ 0.4
SCLT1-208ENST00000506368 RASSF10A6NK89 507 aa17.55■□□□□ 0.4
SCLT1-208ENST00000506368 ZNF263O14978 683 aa17.55■□□□□ 0.4
SCLT1-208ENST00000506368 MOCS3O95396 460 aa17.55■□□□□ 0.4
SCLT1-208ENST00000506368 PCP11498 1178 aaKnown RBP17.55■□□□□ 0.4
SCLT1-208ENST00000506368 MATR3P43243 847 aaKnown RBP eCLIP17.55■□□□□ 0.42e-6■■■□□ 18.8
SCLT1-208ENST00000506368 BAG6P46379 1132 aa17.55■□□□□ 0.4
SCLT1-208ENST00000506368 CLNS1AP54105 237 aaKnown RBP17.55■□□□□ 0.4
SCLT1-208ENST00000506368 PPARAQ07869 468 aa17.55■□□□□ 0.4
SCLT1-208ENST00000506368 RIPK1Q13546 671 aa17.55■□□□□ 0.4
SCLT1-208ENST00000506368 PI16Q6UXB8 463 aa17.55■□□□□ 0.4
SCLT1-208ENST00000506368 DNAJC10Q8IXB1 793 aa17.55■□□□□ 0.4
SCLT1-208ENST00000506368 ESR2Q92731 530 aa17.55■□□□□ 0.4
SCLT1-208ENST00000506368 EPB41L5Q9HCM4 733 aa17.55■□□□□ 0.4
SCLT1-208ENST00000506368 SLC12A6Q9UHW9 1150 aa17.55■□□□□ 0.4
SCLT1-208ENST00000506368 TAF1LQ8IZX4 1826 aa17.54■□□□□ 0.4
SCLT1-208ENST00000506368 RREB1Q92766 1687 aa17.54■□□□□ 0.4
SCLT1-208ENST00000506368 TRIM49BA6NDI0 452 aa17.54■□□□□ 0.4
SCLT1-208ENST00000506368 AKR1B10O60218 316 aa17.54■□□□□ 0.4
SCLT1-208ENST00000506368 RTN2O75298 545 aa17.54■□□□□ 0.4
SCLT1-208ENST00000506368 MAGEA1P43355 309 aa17.54■□□□□ 0.4
SCLT1-208ENST00000506368 CARSP49589 748 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 492.7 ms