RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 RAD51CO43502 376 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 CEP104O60308 925 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 PCCAP05165 728 aaPredicted RBP8.42□□□□□ -1.06
NEDD9-208ENST00000504387 DNM2P50570 870 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 MAGOHP61326 146 aaKnown RBP8.42□□□□□ -1.06
NEDD9-208ENST00000504387 DHX9Q08211 1270 aaKnown RBP8.42□□□□□ -1.06
NEDD9-208ENST00000504387 TRIM14Q14142 442 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 MSL1Q68DK7 614 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 CATIPQ7Z7H3 387 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 NLRP10Q86W26 655 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 IFT20Q8IY31 132 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 ENAHQ8N8S7 591 aaPredicted RBP8.42□□□□□ -1.06
NEDD9-208ENST00000504387 GLIS3Q8NEA6 775 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 MGARPQ8TDB4 240 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 KCNV2Q8TDN2 545 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 MICAL1Q8TDZ2 1067 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 MAGOHBQ96A72 148 aaKnown RBP8.42□□□□□ -1.06
NEDD9-208ENST00000504387 DDX47Q9H0S4 455 aaKnown RBP8.42□□□□□ -1.06
NEDD9-208ENST00000504387 RFX7Q2KHR2 1363 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 LRRC10BA6NIK2 292 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 LGR5O75473 907 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 SLCO1A2P46721 670 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 IFFO1Q0D2I5 559 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 ADSSL1Q8N142 457 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 FBXO41Q8TF61 875 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 LPIN2Q92539 896 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 GJA10Q969M2 543 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 TLR10Q9BXR5 811 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 VCPKMTQ9H867 229 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 GPR108Q9NPR9 543 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 CNOT8Q9UFF9 292 aaKnown RBP8.42□□□□□ -1.06
NEDD9-208ENST00000504387 ADAMTS1Q9UHI8 967 aa8.42□□□□□ -1.06
NEDD9-208ENST00000504387 NIP7Q9Y221 180 aaKnown RBP eCLIP8.42□□□□□ -1.06
NEDD9-208ENST00000504387 GOLGA8HP0CJ92 632 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 CCNHP51946 323 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-208ENST00000504387 ZBED6P86452 979 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 CACNB1Q02641 598 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-208ENST00000504387 KRT71Q3SY84 523 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 ADGRA1Q86SQ6 560 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 FUKQ8N0W3 1084 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 KIF2BQ8N4N8 673 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 SRBD1Q8N5C6 995 aaKnown RBP8.41□□□□□ -1.06
NEDD9-208ENST00000504387 MSL3Q8N5Y2 521 aaKnown RBP8.41□□□□□ -1.06
NEDD9-208ENST00000504387 LRRC15Q8TF66 581 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 FERMT2Q96AC1 680 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 SPDL1Q96EA4 605 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 ATP6V1G3Q96LB4 118 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 CELF4Q9BZC1 486 aaKnown RBP8.41□□□□□ -1.06
NEDD9-208ENST00000504387 SH2D4AQ9H788 454 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 TFCP2L1Q9NZI6 479 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 MCM8Q9UJA3 840 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 LEMD3Q9Y2U8 911 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 OVOS2A0A0G2JMS6 1433 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 SPATA31A3Q5VYP0 1347 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 EME2A4GXA9 379 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-208ENST00000504387 GCOM1H8Y6P7 765 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-208ENST00000504387 MYZAPP0CAP1 466 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 TECP42680 631 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 LETM2Q2VYF4 491 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 CFAP221Q4G0U5 840 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 DTHD1Q6ZMT9 781 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 HEATR3Q7Z4Q2 680 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 CADPS2Q86UW7 1296 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 NELFCDQ8IXH7 590 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 ZNF507Q8TCN5 953 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 PIK3R5Q8WYR1 880 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 PRCCQ92733 491 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-208ENST00000504387 RPGRIP1Q96KN7 1286 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 DUSP9Q99956 384 aaKnown RBP8.41□□□□□ -1.06
NEDD9-208ENST00000504387 PHF20Q9BVI0 1012 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 KIF9Q9HAQ2 790 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 THRAP3Q9Y2W1 955 aaKnown RBP8.41□□□□□ -1.06
NEDD9-208ENST00000504387 TOPAZ1Q8N9V7 1692 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 GMNCA6NCL1 334 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 CIAO1O76071 339 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 FSBPO95073 299 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 PAK2Q13177 524 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 RAPGEF1Q13905 1077 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 PUM3Q15397 648 aaKnown RBP8.41□□□□□ -1.06
NEDD9-208ENST00000504387 CCDC38Q502W7 563 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 ALS2CLQ60I27 953 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 TRIM68Q6AZZ1 485 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 EMBQ6PCB8 327 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 MMGT1Q8N4V1 131 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 TBC1D5Q92609 795 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 HVCN1Q96D96 273 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 SEC16BQ96JE7 1060 aa8.41□□□□□ -1.06
NEDD9-208ENST00000504387 FAM205AQ6ZU69 1335 aa8.4□□□□□ -1.06
NEDD9-208ENST00000504387 CCDC194A0A1B0GVG4 234 aa8.4□□□□□ -1.06
NEDD9-208ENST00000504387 VIMP08670 466 aaKnown RBP8.4□□□□□ -1.06
NEDD9-208ENST00000504387 SRGNP10124 158 aa8.4□□□□□ -1.06
NEDD9-208ENST00000504387 CYP2D6P10635 497 aa8.4□□□□□ -1.06
NEDD9-208ENST00000504387 PLCG1P19174 1290 aa8.4□□□□□ -1.06
NEDD9-208ENST00000504387 KLRC1P26715 233 aa8.4□□□□□ -1.06
NEDD9-208ENST00000504387 SCTRP47872 440 aa8.4□□□□□ -1.06
NEDD9-208ENST00000504387 POLR2FP61218 127 aaKnown RBP8.4□□□□□ -1.06
NEDD9-208ENST00000504387 KIAA0753Q2KHM9 967 aa8.4□□□□□ -1.06
NEDD9-208ENST00000504387 KLHDC7AQ5VTJ3 777 aa8.4□□□□□ -1.06
NEDD9-208ENST00000504387 ARMC3Q5W041 872 aa8.4□□□□□ -1.06
NEDD9-208ENST00000504387 CACNA2D3Q8IZS8 1091 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms