RNA–Protein interactions for RNA: ENST00000491294.1

ARPC1B-220, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 1,051 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-220ENST00000491294 SLC27A2O14975 620 aa20.62■□□□□ 0.89
ARPC1B-220ENST00000491294 PPP1R11O60927 126 aaPredicted RBP20.62■□□□□ 0.89
ARPC1B-220ENST00000491294 CFBP00751 764 aa20.62■□□□□ 0.89
ARPC1B-220ENST00000491294 GHRHRQ02643 423 aa20.62■□□□□ 0.89
ARPC1B-220ENST00000491294 NECTIN1Q15223 517 aa20.62■□□□□ 0.89
ARPC1B-220ENST00000491294 SLC35G1Q2M3R5 365 aa20.62■□□□□ 0.89
ARPC1B-220ENST00000491294 BRDTQ58F21 947 aaPredicted RBP20.62■□□□□ 0.89
ARPC1B-220ENST00000491294 SAMD3Q8N6K7 520 aa20.62■□□□□ 0.89
ARPC1B-220ENST00000491294 ANO2Q9NQ90 1003 aa20.62■□□□□ 0.89
ARPC1B-220ENST00000491294 MYH6P13533 1939 aa20.61■□□□□ 0.89
ARPC1B-220ENST00000491294 GRIN2DO15399 1336 aa20.61■□□□□ 0.89
ARPC1B-220ENST00000491294 OPLAHO14841 1288 aa20.61■□□□□ 0.89
ARPC1B-220ENST00000491294 CD4P01730 458 aa20.61■□□□□ 0.89
ARPC1B-220ENST00000491294 TXNP10599 105 aaKnown RBP20.61■□□□□ 0.89
ARPC1B-220ENST00000491294 MCM5P33992 734 aa20.61■□□□□ 0.89
ARPC1B-220ENST00000491294 HSD17B4P51659 736 aa20.61■□□□□ 0.89
ARPC1B-220ENST00000491294 STXBP2Q15833 593 aa20.61■□□□□ 0.89
ARPC1B-220ENST00000491294 ARHGEF16Q5VV41 709 aa20.61■□□□□ 0.89
ARPC1B-220ENST00000491294 CREB3L3Q68CJ9 461 aa20.61■□□□□ 0.89
ARPC1B-220ENST00000491294 MFSD5Q6N075 450 aa20.61■□□□□ 0.89
ARPC1B-220ENST00000491294 HOMER1Q86YM7 354 aa20.61■□□□□ 0.89
ARPC1B-220ENST00000491294 TMTC2Q8N394 836 aa20.61■□□□□ 0.89
ARPC1B-220ENST00000491294 DEFB123Q8N688 67 aa20.61■□□□□ 0.89
ARPC1B-220ENST00000491294 PIGSQ96S52 555 aa20.61■□□□□ 0.89
ARPC1B-220ENST00000491294 MAP3K14Q99558 947 aa20.61■□□□□ 0.89
ARPC1B-220ENST00000491294 LY9Q9HBG7 655 aa20.61■□□□□ 0.89
ARPC1B-220ENST00000491294 PNMA6FA0A0J9YX94 578 aa20.6■□□□□ 0.89
ARPC1B-220ENST00000491294 PRC1O43663 620 aa20.6■□□□□ 0.89
ARPC1B-220ENST00000491294 CYTH3O43739 400 aa20.6■□□□□ 0.89
ARPC1B-220ENST00000491294 MYL3P08590 195 aa20.6■□□□□ 0.89
ARPC1B-220ENST00000491294 EPHB4P54760 987 aa20.6■□□□□ 0.89
ARPC1B-220ENST00000491294 PSMC6P62333 389 aa20.6■□□□□ 0.89
ARPC1B-220ENST00000491294 ZNF654Q8IZM8 581 aa20.6■□□□□ 0.89
ARPC1B-220ENST00000491294 COPS5Q92905 334 aa20.6■□□□□ 0.89
ARPC1B-220ENST00000491294 TMEM87BQ96K49 555 aa20.6■□□□□ 0.89
ARPC1B-220ENST00000491294 GPHNQ9NQX3 736 aaPredicted RBP20.6■□□□□ 0.89
ARPC1B-220ENST00000491294 KPNA6O60684 536 aa20.59■□□□□ 0.89
ARPC1B-220ENST00000491294 DDAH1O94760 285 aa20.59■□□□□ 0.89
ARPC1B-220ENST00000491294 ARIH2O95376 493 aa20.59■□□□□ 0.89
ARPC1B-220ENST00000491294 EIF2AK2P19525 551 aaKnown RBP20.59■□□□□ 0.89
ARPC1B-220ENST00000491294 PURAQ00577 322 aaKnown RBP20.59■□□□□ 0.89
ARPC1B-220ENST00000491294 FAM109BQ6ICB4 259 aaPredicted RBP20.59■□□□□ 0.89
ARPC1B-220ENST00000491294 CCDC62Q6P9F0 684 aa20.59■□□□□ 0.89
ARPC1B-220ENST00000491294 SEPT14Q6ZU15 432 aa20.59■□□□□ 0.89
ARPC1B-220ENST00000491294 Q7L0L9 218 aa20.59■□□□□ 0.89
ARPC1B-220ENST00000491294 MTG1Q9BT17 334 aaPredicted RBP20.59■□□□□ 0.89
ARPC1B-220ENST00000491294 PXMP2Q9NR77 195 aa20.59■□□□□ 0.89
ARPC1B-220ENST00000491294 BAZ2BQ9UIF8 2168 aaKnown RBP20.59■□□□□ 0.89
ARPC1B-220ENST00000491294 A6NJR5 290 aa20.58■□□□□ 0.89
ARPC1B-220ENST00000491294 EIF3JO75822 258 aaKnown RBP20.58■□□□□ 0.89
ARPC1B-220ENST00000491294 NR3C2P08235 984 aa20.58■□□□□ 0.89
ARPC1B-220ENST00000491294 KIF5BP33176 963 aa20.58■□□□□ 0.89
ARPC1B-220ENST00000491294 PPIGQ13427 754 aaKnown RBP eCLIP20.58■□□□□ 0.898e-9■■□□□ 13.7
ARPC1B-220ENST00000491294 TMEM199Q8N511 208 aa20.58■□□□□ 0.89
ARPC1B-220ENST00000491294 CTCFLQ8NI51 663 aaPredicted RBP20.58■□□□□ 0.89
ARPC1B-220ENST00000491294 CCDC69A6NI79 296 aa20.57■□□□□ 0.88
ARPC1B-220ENST00000491294 GCOM1H8Y6P7 765 aaPredicted RBP20.57■□□□□ 0.88
ARPC1B-220ENST00000491294 SH2B2O14492 632 aaPredicted RBP20.57■□□□□ 0.88
ARPC1B-220ENST00000491294 POLR2MP0CAP2 368 aa20.57■□□□□ 0.88
ARPC1B-220ENST00000491294 SMARCA1P28370 1054 aa20.57■□□□□ 0.88
ARPC1B-220ENST00000491294 LIFRP42702 1097 aa20.57■□□□□ 0.88
ARPC1B-220ENST00000491294 GNAQP50148 359 aa20.57■□□□□ 0.88
ARPC1B-220ENST00000491294 RNF20Q5VTR2 975 aa20.57■□□□□ 0.88
ARPC1B-220ENST00000491294 NFXL1Q6ZNB6 911 aa20.57■□□□□ 0.88
ARPC1B-220ENST00000491294 RNPC3Q96LT9 517 aaKnown RBP20.57■□□□□ 0.88
ARPC1B-220ENST00000491294 LZTS2Q9BRK4 669 aa20.57■□□□□ 0.88
ARPC1B-220ENST00000491294 MYL10Q9BUA6 226 aa20.57■□□□□ 0.88
ARPC1B-220ENST00000491294 SPZ1Q9BXG8 430 aa20.57■□□□□ 0.88
ARPC1B-220ENST00000491294 PPP1R12CQ9BZL4 782 aa20.57■□□□□ 0.88
ARPC1B-220ENST00000491294 MTMR10Q9NXD2 777 aa20.57■□□□□ 0.88
ARPC1B-220ENST00000491294 B4GALT4O60513 344 aa20.56■□□□□ 0.88
ARPC1B-220ENST00000491294 GH1P01241 217 aa20.56■□□□□ 0.88
ARPC1B-220ENST00000491294 SMAD3P84022 425 aaKnown RBP20.56■□□□□ 0.88
ARPC1B-220ENST00000491294 LY6KQ17RY6 165 aa20.56■□□□□ 0.88
ARPC1B-220ENST00000491294 CCDC136Q96JN2 1154 aa20.56■□□□□ 0.88
ARPC1B-220ENST00000491294 PDCD2LQ9BRP1 358 aa20.56■□□□□ 0.88
ARPC1B-220ENST00000491294 TRPV6Q9H1D0 765 aa20.56■□□□□ 0.88
ARPC1B-220ENST00000491294 ALDH8A1Q9H2A2 487 aaPredicted RBP20.56■□□□□ 0.88
ARPC1B-220ENST00000491294 CDC45O75419 566 aa20.55■□□□□ 0.88
ARPC1B-220ENST00000491294 SUPT20HL2P0C7V6 817 aa20.55■□□□□ 0.88
ARPC1B-220ENST00000491294 CSF2RAP15509 400 aa20.55■□□□□ 0.88
ARPC1B-220ENST00000491294 HOXA13P31271 388 aaPredicted RBP20.55■□□□□ 0.88
ARPC1B-220ENST00000491294 HIPK3Q9H422 1215 aa20.55■□□□□ 0.88
ARPC1B-220ENST00000491294 DDX41Q9UJV9 622 aaKnown RBP20.55■□□□□ 0.88
ARPC1B-220ENST00000491294 CALM1P0DP23 149 aa20.54■□□□□ 0.88
ARPC1B-220ENST00000491294 CALM2P0DP24 149 aa20.54■□□□□ 0.88
ARPC1B-220ENST00000491294 CALM3P0DP25 149 aa20.54■□□□□ 0.88
ARPC1B-220ENST00000491294 MYCLP12524 364 aaPredicted RBP20.54■□□□□ 0.88
ARPC1B-220ENST00000491294 CYP2C18P33260 490 aa20.54■□□□□ 0.88
ARPC1B-220ENST00000491294 ARHGAP1Q07960 439 aa20.54■□□□□ 0.88
ARPC1B-220ENST00000491294 COL9A3Q14050 684 aaPredicted RBP20.54■□□□□ 0.88
ARPC1B-220ENST00000491294 NBPF20Q3BBV1 942 aa20.54■□□□□ 0.88
ARPC1B-220ENST00000491294 NFRKBQ6P4R8 1299 aa20.54■□□□□ 0.88
ARPC1B-220ENST00000491294 VSIG10LQ86VR7 867 aa20.54■□□□□ 0.88
ARPC1B-220ENST00000491294 AFG1LQ8WV93 481 aa20.54■□□□□ 0.88
ARPC1B-220ENST00000491294 PIBF1Q8WXW3 757 aa20.54■□□□□ 0.88
ARPC1B-220ENST00000491294 RRP36Q96EU6 259 aaKnown RBP20.54■□□□□ 0.88
ARPC1B-220ENST00000491294 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.54■□□□□ 0.88
ARPC1B-220ENST00000491294 MRVI1Q9Y6F6 885 aa20.54■□□□□ 0.88
ARPC1B-220ENST00000491294 MMP3P08254 477 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms