RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 CCDC144BQ3MJ40 725 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 ASPRV1Q53RT3 343 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 SYDE2Q5VT97 1194 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 CCDC174Q6PII3 467 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 APOA5Q6Q788 366 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 FAM160B2Q86V87 743 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 SGMS1Q86VZ5 419 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 CMTR1Q8N1G2 835 aaKnown RBP10.52□□□□□ -0.73
VCP-206ENST00000480327 CTCFLQ8NI51 663 aaPredicted RBP10.52□□□□□ -0.73
VCP-206ENST00000480327 CHURC1Q8WUH1 139 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 PIBF1Q8WXW3 757 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 PRR12Q9ULL5 1215 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 CNPY2Q9Y2B0 182 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 TMEM265A0A087WTH1 108 aa10.51□□□□□ -0.73
VCP-206ENST00000480327 PALM3A6NDB9 673 aaPredicted RBP10.51□□□□□ -0.73
VCP-206ENST00000480327 SOWAHBA6NEL2 793 aa10.51□□□□□ -0.73
VCP-206ENST00000480327 GOLGA8AA7E2F4 631 aa10.51□□□□□ -0.73
VCP-206ENST00000480327 ZBTB43O43298 467 aa10.51□□□□□ -0.73
VCP-206ENST00000480327 ZBED4O75132 1171 aa10.51□□□□□ -0.73
VCP-206ENST00000480327 PLEKHA8P1O95397 391 aa10.51□□□□□ -0.73
VCP-206ENST00000480327 GJA9P57773 515 aa10.51□□□□□ -0.73
VCP-206ENST00000480327 NKX3-2P78367 333 aa10.51□□□□□ -0.73
VCP-206ENST00000480327 CCT2P78371 535 aaKnown RBP10.51□□□□□ -0.73
VCP-206ENST00000480327 TMEM240Q5SV17 173 aa10.51□□□□□ -0.73
VCP-206ENST00000480327 TMEM63BQ5T3F8 832 aa10.51□□□□□ -0.73
VCP-206ENST00000480327 GPATCH4Q5T3I0 446 aaKnown RBP10.51□□□□□ -0.73
VCP-206ENST00000480327 MFSD5Q6N075 450 aa10.51□□□□□ -0.73
VCP-206ENST00000480327 ARMCX2Q7L311 632 aa10.51□□□□□ -0.73
VCP-206ENST00000480327 FAM126BQ8IXS8 530 aa10.51□□□□□ -0.73
VCP-206ENST00000480327 ADGRF4Q8IZF3 695 aa10.51□□□□□ -0.73
VCP-206ENST00000480327 CCDC82Q8N4S0 544 aa10.51□□□□□ -0.73
VCP-206ENST00000480327 FAM133AQ8N9E0 248 aa10.51□□□□□ -0.73
VCP-206ENST00000480327 FANCBQ8NB91 859 aa10.51□□□□□ -0.73
VCP-206ENST00000480327 IL17RAQ96F46 866 aa10.51□□□□□ -0.73
VCP-206ENST00000480327 DDX11Q96FC9 970 aa10.51□□□□□ -0.73
VCP-206ENST00000480327 PRDM6Q9NQX0 595 aa10.51□□□□□ -0.73
VCP-206ENST00000480327 GRIN2DO15399 1336 aa10.51□□□□□ -0.73
VCP-206ENST00000480327 ELP1O95163 1332 aa10.51□□□□□ -0.73
VCP-206ENST00000480327 BDP1A6H8Y1 2624 aa10.5□□□□□ -0.73
VCP-206ENST00000480327 DCDC2CA8MYV0 355 aa10.5□□□□□ -0.73
VCP-206ENST00000480327 CD4P01730 458 aa10.5□□□□□ -0.73
VCP-206ENST00000480327 C6orf222P0C671 652 aaPredicted RBP10.5□□□□□ -0.73
VCP-206ENST00000480327 CALM1P0DP23 149 aa10.5□□□□□ -0.73
VCP-206ENST00000480327 CALM2P0DP24 149 aa10.5□□□□□ -0.73
VCP-206ENST00000480327 CALM3P0DP25 149 aa10.5□□□□□ -0.73
VCP-206ENST00000480327 CSF2RAP15509 400 aa10.5□□□□□ -0.73
VCP-206ENST00000480327 KIF5BP33176 963 aa10.5□□□□□ -0.73
VCP-206ENST00000480327 METAP2P50579 478 aaKnown RBP eCLIP10.5□□□□□ -0.73
VCP-206ENST00000480327 BEX3Q00994 111 aa10.5□□□□□ -0.73
VCP-206ENST00000480327 RTN1Q16799 776 aa10.5□□□□□ -0.73
VCP-206ENST00000480327 SLC35G1Q2M3R5 365 aa10.5□□□□□ -0.73
VCP-206ENST00000480327 BTNL9Q6UXG8 535 aa10.5□□□□□ -0.73
VCP-206ENST00000480327 VWCEQ96DN2 955 aa10.5□□□□□ -0.73
VCP-206ENST00000480327 AGBL1Q96MI9 1066 aa10.5□□□□□ -0.73
VCP-206ENST00000480327 AGXT2Q9BYV1 514 aa10.5□□□□□ -0.73
VCP-206ENST00000480327 ABHD16BQ9H3Z7 469 aa10.5□□□□□ -0.73
VCP-206ENST00000480327 A1CFQ9NQ94 594 aaKnown RBP10.5□□□□□ -0.73
VCP-206ENST00000480327 TANC1Q9C0D5 1861 aa10.5□□□□□ -0.73
VCP-206ENST00000480327 BAZ2BQ9UIF8 2168 aaKnown RBP10.5□□□□□ -0.73
VCP-206ENST00000480327 UMODL1Q5DID0 1318 aa10.5□□□□□ -0.73
VCP-206ENST00000480327 TCF20Q9UGU0 1960 aaKnown RBP10.49□□□□□ -0.73
VCP-206ENST00000480327 SCN10AQ9Y5Y9 1956 aa10.49□□□□□ -0.73
VCP-206ENST00000480327 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.49□□□□□ -0.73
VCP-206ENST00000480327 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.49□□□□□ -0.73
VCP-206ENST00000480327 hCG_1642624A0A1W2PR95 340 aa10.49□□□□□ -0.73
VCP-206ENST00000480327 ARVCFO00192 962 aa10.49□□□□□ -0.73
VCP-206ENST00000480327 PLA2G6O60733 806 aa10.49□□□□□ -0.73
VCP-206ENST00000480327 DTNBO60941 627 aa10.49□□□□□ -0.73
VCP-206ENST00000480327 PPFIA3O75145 1194 aa10.49□□□□□ -0.73
VCP-206ENST00000480327 ACRP10323 421 aa10.49□□□□□ -0.73
VCP-206ENST00000480327 PDIA3P30101 505 aaKnown RBP10.49□□□□□ -0.73
VCP-206ENST00000480327 CDC27P30260 824 aa10.49□□□□□ -0.73
VCP-206ENST00000480327 ADD1P35611 737 aaKnown RBP10.49□□□□□ -0.73
VCP-206ENST00000480327 OAZ1P54368 228 aa10.49□□□□□ -0.73
VCP-206ENST00000480327 RABEP1Q15276 862 aa10.49□□□□□ -0.73
VCP-206ENST00000480327 HOMER1Q86YM7 354 aa10.49□□□□□ -0.73
VCP-206ENST00000480327 ANKRD35Q8N283 1001 aa10.49□□□□□ -0.73
VCP-206ENST00000480327 FBXL16Q8N461 479 aa10.49□□□□□ -0.73
VCP-206ENST00000480327 SRBD1Q8N5C6 995 aaKnown RBP10.49□□□□□ -0.73
VCP-206ENST00000480327 SLC43A3Q8NBI5 491 aa10.49□□□□□ -0.73
VCP-206ENST00000480327 CHST13Q8NET6 341 aa10.49□□□□□ -0.73
VCP-206ENST00000480327 PURBQ96QR8 312 aaKnown RBP10.49□□□□□ -0.73
VCP-206ENST00000480327 MAP3K14Q99558 947 aa10.49□□□□□ -0.73
VCP-206ENST00000480327 PBX4Q9BYU1 374 aa10.49□□□□□ -0.73
VCP-206ENST00000480327 ZNF576Q9H609 170 aa10.49□□□□□ -0.73
VCP-206ENST00000480327 JMJD4Q9H9V9 463 aa10.49□□□□□ -0.73
VCP-206ENST00000480327 NCOA5Q9HCD5 579 aaKnown RBP10.49□□□□□ -0.73
VCP-206ENST00000480327 HOMER2Q9NSB8 354 aa10.49□□□□□ -0.73
VCP-206ENST00000480327 CXXC1Q9P0U4 656 aaPredicted RBP10.49□□□□□ -0.73
VCP-206ENST00000480327 TPCN1Q9ULQ1 816 aa10.49□□□□□ -0.73
VCP-206ENST00000480327 GNEQ9Y223 722 aaKnown RBP10.49□□□□□ -0.73
VCP-206ENST00000480327 TET1Q8NFU7 2136 aa10.49□□□□□ -0.73
VCP-206ENST00000480327 MYH6P13533 1939 aa10.48□□□□□ -0.73
VCP-206ENST00000480327 TRIP12Q14669 1992 aaPredicted RBP10.48□□□□□ -0.73
VCP-206ENST00000480327 A0A0U1RQG5 324 aaPredicted RBP10.48□□□□□ -0.73
VCP-206ENST00000480327 CYTH3O43739 400 aa10.48□□□□□ -0.73
VCP-206ENST00000480327 LARGE1O95461 756 aa10.48□□□□□ -0.73
VCP-206ENST00000480327 ALAS1P13196 640 aa10.48□□□□□ -0.73
VCP-206ENST00000480327 CYP2C18P33260 490 aa10.48□□□□□ -0.73
VCP-206ENST00000480327 ADGRE1Q14246 886 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms