RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 TMEM106CQ9BVX2 250 aa19.51■□□□□ 0.71
SCAF11-206ENST00000474828 ZMYND12Q9H0C1 365 aa19.51■□□□□ 0.71
SCAF11-206ENST00000474828 RIC8AQ9NPQ8 531 aa19.51■□□□□ 0.71
SCAF11-206ENST00000474828 SH3GLB2Q9NR46 395 aa19.51■□□□□ 0.71
SCAF11-206ENST00000474828 OGDHLQ9ULD0 1010 aa19.51■□□□□ 0.71
SCAF11-206ENST00000474828 POTEFA5A3E0 1075 aa19.5■□□□□ 0.71
SCAF11-206ENST00000474828 CDKL5O76039 1030 aa19.5■□□□□ 0.71
SCAF11-206ENST00000474828 DEXIO95424 95 aa19.5■□□□□ 0.71
SCAF11-206ENST00000474828 STK3Q13188 491 aa19.5■□□□□ 0.71
SCAF11-206ENST00000474828 PRAMEF19Q5SWL8 479 aa19.5■□□□□ 0.71
SCAF11-206ENST00000474828 TAPT1Q6NXT6 567 aa19.5■□□□□ 0.71
SCAF11-206ENST00000474828 HEATR3Q7Z4Q2 680 aa19.5■□□□□ 0.71
SCAF11-206ENST00000474828 UBE2Q1Q7Z7E8 422 aa19.5■□□□□ 0.71
SCAF11-206ENST00000474828 U2AF1L4Q8WU68 220 aaKnown RBP19.5■□□□□ 0.71
SCAF11-206ENST00000474828 RMDN3Q96TC7 470 aa19.5■□□□□ 0.71
SCAF11-206ENST00000474828 GLT8D2Q9H1C3 349 aa19.5■□□□□ 0.71
SCAF11-206ENST00000474828 PSTPIP2Q9H939 334 aa19.5■□□□□ 0.71
SCAF11-206ENST00000474828 VTA1Q9NP79 307 aa19.5■□□□□ 0.71
SCAF11-206ENST00000474828 PXMP2Q9NR77 195 aa19.5■□□□□ 0.71
SCAF11-206ENST00000474828 DDX20Q9UHI6 824 aaKnown RBP19.5■□□□□ 0.71
SCAF11-206ENST00000474828 CNPY2Q9Y2B0 182 aa19.5■□□□□ 0.71
SCAF11-206ENST00000474828 CPLX1O14810 134 aa19.49■□□□□ 0.71
SCAF11-206ENST00000474828 CLK2P49760 499 aaKnown RBP19.49■□□□□ 0.71
SCAF11-206ENST00000474828 SSRP1Q08945 709 aaKnown RBP19.49■□□□□ 0.71
SCAF11-206ENST00000474828 TRIM22Q8IYM9 498 aa19.49■□□□□ 0.71
SCAF11-206ENST00000474828 PDCD2LQ9BRP1 358 aa19.49■□□□□ 0.71
SCAF11-206ENST00000474828 SLC26A6Q9BXS9 759 aa19.49■□□□□ 0.71
SCAF11-206ENST00000474828 SH2B1Q9NRF2 756 aaPredicted RBP19.49■□□□□ 0.71
SCAF11-206ENST00000474828 B4DLN1 442 aa19.48■□□□□ 0.71
SCAF11-206ENST00000474828 ST18O60284 1047 aa19.48■□□□□ 0.71
SCAF11-206ENST00000474828 FDPSP14324 419 aaKnown RBP19.48■□□□□ 0.71
SCAF11-206ENST00000474828 HOXA13P31271 388 aaPredicted RBP19.48■□□□□ 0.71
SCAF11-206ENST00000474828 MCM2P49736 904 aa19.48■□□□□ 0.71
SCAF11-206ENST00000474828 MNX1P50219 401 aaPredicted RBP19.48■□□□□ 0.71
SCAF11-206ENST00000474828 MRPL12P52815 198 aaKnown RBP19.48■□□□□ 0.71
SCAF11-206ENST00000474828 USP17L6PQ6QN14 398 aa19.48■□□□□ 0.71
SCAF11-206ENST00000474828 VSIG10LQ86VR7 867 aa19.48■□□□□ 0.71
SCAF11-206ENST00000474828 NECAB1Q8N987 351 aa19.48■□□□□ 0.71
SCAF11-206ENST00000474828 ANKLE1Q8NAG6 615 aa19.48■□□□□ 0.71
SCAF11-206ENST00000474828 NSUN7Q8NE18 718 aaKnown RBP19.48■□□□□ 0.71
SCAF11-206ENST00000474828 CUL5Q93034 780 aa19.48■□□□□ 0.71
SCAF11-206ENST00000474828 DEFB118Q96PH6 123 aa19.48■□□□□ 0.71
SCAF11-206ENST00000474828 MPHOSPH6Q99547 160 aaKnown RBP19.48■□□□□ 0.71
SCAF11-206ENST00000474828 NR3C2P08235 984 aa19.47■□□□□ 0.71
SCAF11-206ENST00000474828 AKR1A1P14550 325 aa19.47■□□□□ 0.71
SCAF11-206ENST00000474828 NAPAP54920 295 aa19.47■□□□□ 0.71
SCAF11-206ENST00000474828 AKAP17AQ02040 695 aaKnown RBP19.47■□□□□ 0.71
SCAF11-206ENST00000474828 SMARCC2Q8TAQ2 1214 aa19.47■□□□□ 0.71
SCAF11-206ENST00000474828 CCDC12Q8WUD4 166 aaPredicted RBP19.47■□□□□ 0.71
SCAF11-206ENST00000474828 LLPHQ9BRT6 129 aaKnown RBP19.47■□□□□ 0.71
SCAF11-206ENST00000474828 DDX49Q9Y6V7 483 aaKnown RBP19.47■□□□□ 0.71
SCAF11-206ENST00000474828 PDE4DIPQ5VU43 2346 aa19.46■□□□□ 0.71
SCAF11-206ENST00000474828 KIAA0100Q14667 2235 aaKnown RBP19.46■□□□□ 0.71
SCAF11-206ENST00000474828 SMCO2A6NFE2 343 aa19.46■□□□□ 0.71
SCAF11-206ENST00000474828 EIF3JO75822 258 aaKnown RBP19.46■□□□□ 0.71
SCAF11-206ENST00000474828 CD2BP2O95400 341 aaKnown RBP19.46■□□□□ 0.71
SCAF11-206ENST00000474828 PGM5Q15124 567 aa19.46■□□□□ 0.71
SCAF11-206ENST00000474828 NPY5RQ15761 445 aa19.46■□□□□ 0.71
SCAF11-206ENST00000474828 CCDC144BQ3MJ40 725 aa19.46■□□□□ 0.71
SCAF11-206ENST00000474828 MCTP2Q6DN12 878 aa19.46■□□□□ 0.71
SCAF11-206ENST00000474828 IQSEC1Q6DN90 963 aa19.46■□□□□ 0.71
SCAF11-206ENST00000474828 XRRA1Q6P2D8 792 aa19.46■□□□□ 0.71
SCAF11-206ENST00000474828 CRYGNQ8WXF5 182 aa19.46■□□□□ 0.71
SCAF11-206ENST00000474828 FAM184BQ9ULE4 1060 aa19.46■□□□□ 0.71
SCAF11-206ENST00000474828 MKI67P46013 3256 aaKnown RBP19.46■□□□□ 0.71
SCAF11-206ENST00000474828 MCM3APO60318 1980 aa19.46■□□□□ 0.71
SCAF11-206ENST00000474828 ADCY6O43306 1168 aa19.45■□□□□ 0.7
SCAF11-206ENST00000474828 DUSP11O75319 330 aaKnown RBP19.45■□□□□ 0.7
SCAF11-206ENST00000474828 STAM2O75886 525 aa19.45■□□□□ 0.7
SCAF11-206ENST00000474828 FOSP01100 380 aaPredicted RBP19.45■□□□□ 0.7
SCAF11-206ENST00000474828 EN2P19622 333 aaPredicted RBP19.45■□□□□ 0.7
SCAF11-206ENST00000474828 ADCY7P51828 1080 aa19.45■□□□□ 0.7
SCAF11-206ENST00000474828 PDE4DQ08499 809 aa19.45■□□□□ 0.7
SCAF11-206ENST00000474828 STXBP2Q15833 593 aa19.45■□□□□ 0.7
SCAF11-206ENST00000474828 ARHGEF16Q5VV41 709 aa19.45■□□□□ 0.7
SCAF11-206ENST00000474828 CCDC62Q6P9F0 684 aa19.45■□□□□ 0.7
SCAF11-206ENST00000474828 UPF3AQ9H1J1 476 aaKnown RBP19.45■□□□□ 0.7
SCAF11-206ENST00000474828 GNEQ9Y223 722 aaKnown RBP19.45■□□□□ 0.7
SCAF11-206ENST00000474828 Q9Y3F1 56 aa19.45■□□□□ 0.7
SCAF11-206ENST00000474828 FRMPD3Q5JV73 1810 aa19.45■□□□□ 0.7
SCAF11-206ENST00000474828 M0R2N6 131 aa19.44■□□□□ 0.7
SCAF11-206ENST00000474828 TNRC18O15417 2968 aaPredicted RBP19.44■□□□□ 0.7
SCAF11-206ENST00000474828 RGS20O76081 388 aa19.44■□□□□ 0.7
SCAF11-206ENST00000474828 MYCP01106 439 aaPredicted RBP19.44■□□□□ 0.7
SCAF11-206ENST00000474828 MRPS9P82933 396 aaKnown RBP19.44■□□□□ 0.7
SCAF11-206ENST00000474828 AP3B2Q13367 1082 aa19.44■□□□□ 0.7
SCAF11-206ENST00000474828 PCNX4Q63HM2 1172 aa19.44■□□□□ 0.7
SCAF11-206ENST00000474828 GALNT17Q6IS24 598 aa19.44■□□□□ 0.7
SCAF11-206ENST00000474828 DAGLBQ8NCG7 672 aa19.44■□□□□ 0.7
SCAF11-206ENST00000474828 CCDC148Q8NFR7 591 aa19.44■□□□□ 0.7
SCAF11-206ENST00000474828 IL31RAQ8NI17 732 aa19.44■□□□□ 0.7
SCAF11-206ENST00000474828 ADAMTS3O15072 1205 aa19.43■□□□□ 0.7
SCAF11-206ENST00000474828 ADAMTS4O75173 837 aa19.43■□□□□ 0.7
SCAF11-206ENST00000474828 EIF2AK2P19525 551 aaKnown RBP19.43■□□□□ 0.7
SCAF11-206ENST00000474828 GNA11P29992 359 aa19.43■□□□□ 0.7
SCAF11-206ENST00000474828 UBE2SQ16763 222 aa19.43■□□□□ 0.7
SCAF11-206ENST00000474828 DUSP28Q4G0W2 176 aa19.43■□□□□ 0.7
SCAF11-206ENST00000474828 NOL8Q76FK4 1167 aaKnown RBP19.43■□□□□ 0.7
SCAF11-206ENST00000474828 FCHSD1Q86WN1 690 aa19.43■□□□□ 0.7
SCAF11-206ENST00000474828 FBXO16Q8IX29 292 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms