RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 ZNF280CQ8ND82 737 aa5.09□□□□□ -1.6
CCNL1-215ENST00000474539 PPP1R2P1Q96PQ5 205 aa5.09□□□□□ -1.6
CCNL1-215ENST00000474539 MAP3K14Q99558 947 aa5.09□□□□□ -1.6
CCNL1-215ENST00000474539 NSRP1Q9H0G5 558 aaKnown RBP5.09□□□□□ -1.6
CCNL1-215ENST00000474539 OSBPL3Q9H4L5 887 aa5.09□□□□□ -1.6
CCNL1-215ENST00000474539 ZSWIM4Q9H7M6 989 aa5.09□□□□□ -1.6
CCNL1-215ENST00000474539 MRPL44Q9H9J2 332 aaKnown RBP5.09□□□□□ -1.6
CCNL1-215ENST00000474539 SLC38A7Q9NVC3 462 aa5.09□□□□□ -1.6
CCNL1-215ENST00000474539 DACT1Q9NYF0 836 aa5.09□□□□□ -1.6
CCNL1-215ENST00000474539 PCDHA4Q9UN74 947 aa5.09□□□□□ -1.6
CCNL1-215ENST00000474539 MINPP1Q9UNW1 487 aa5.09□□□□□ -1.6
CCNL1-215ENST00000474539 SYNGAP1Q96PV0 1343 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 KAT6BQ8WYB5 2073 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 LOC102724159A0A0B4J2E5 919 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 CAPN9O14815 690 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 STRNO43815 780 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 KDM1AO60341 852 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 EEF2P13639 858 aaKnown RBP5.08□□□□□ -1.6
CCNL1-215ENST00000474539 PWP2Q15269 919 aaKnown RBP5.08□□□□□ -1.6
CCNL1-215ENST00000474539 STILQ15468 1287 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 INF2Q27J81 1249 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 NRKQ7Z2Y5 1582 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 FAM83AQ86UY5 434 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 FAM178BQ8IXR5 827 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 C10orf67Q8IYJ2 551 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 ZNF34Q8IZ26 560 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 ZNF557Q8N988 423 aaPredicted RBP5.08□□□□□ -1.6
CCNL1-215ENST00000474539 BBOF1Q8ND07 529 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 BEST2Q8NFU1 509 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 TDRD7Q8NHU6 1098 aaKnown RBP5.08□□□□□ -1.6
CCNL1-215ENST00000474539 CCT6BQ92526 530 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 TBC1D31Q96DN5 1066 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 TMX3Q96JJ7 454 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 ZFP91Q96JP5 570 aaPredicted RBP5.08□□□□□ -1.6
CCNL1-215ENST00000474539 ZHX2Q9Y6X8 837 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 MROH7Q68CQ1 1323 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 PNPLA7Q6ZV29 1317 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 DENND3A2RUS2 1198 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 STAT3P40763 770 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 SP4Q02446 784 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 FAM160A1Q05DH4 1040 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 ARL13BQ3SXY8 428 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 FAM102BQ5T8I3 360 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 C9orf131Q5VYM1 1079 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 SPECC1LQ69YQ0 1117 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 PRR5LQ6MZQ0 368 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 PIK3AP1Q6ZUJ8 805 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 PPP1R14CQ8TAE6 165 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 ZNF526Q8TF50 670 aaPredicted RBP5.08□□□□□ -1.6
CCNL1-215ENST00000474539 DYDC1Q8WWB3 177 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 DHX58Q96C10 678 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 GLT1D1Q96MS3 346 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 UBN1Q9NPG3 1134 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 LMCD1Q9NZU5 365 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 PARP2Q9UGN5 583 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 LUC7L2Q9Y383 392 aaKnown RBP5.08□□□□□ -1.6
CCNL1-215ENST00000474539 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.08□□□□□ -1.6
CCNL1-215ENST00000474539 BCORL1Q5H9F3 1711 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 E9PCH4 1651 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 A6NNZ2 444 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 PRPF3O43395 683 aaKnown RBP5.08□□□□□ -1.6
CCNL1-215ENST00000474539 CELF2O95319 508 aaKnown RBP5.08□□□□□ -1.6
CCNL1-215ENST00000474539 MOCS3O95396 460 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 KRT5P13647 590 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 TNNI1P19237 187 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 KRT9P35527 623 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 TXKP42681 527 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 MYL7Q01449 175 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 LMNB2Q03252 620 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 KRT17Q04695 432 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 ASIC2Q16515 512 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 TUBB8Q3ZCM7 444 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 SLC9C1Q4G0N8 1177 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 ARL6IP4Q66PJ3 421 aaKnown RBP5.08□□□□□ -1.6
CCNL1-215ENST00000474539 MYOCDQ8IZQ8 938 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 TSPYL6Q8N831 410 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 ZNF594Q96JF6 807 aaPredicted RBP5.08□□□□□ -1.6
CCNL1-215ENST00000474539 MRIQ9BWK5 157 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 USP44Q9H0E7 712 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 SRP68Q9UHB9 627 aaKnown RBP5.08□□□□□ -1.6
CCNL1-215ENST00000474539 CPSF3Q9UKF6 684 aaKnown RBP5.08□□□□□ -1.6
CCNL1-215ENST00000474539 AGTPBP1Q9UPW5 1226 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 CCL15-CCL14A0A0B4J2E2 113 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 KDM4FA0A1W2PPD8 638 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 MACROD2A1Z1Q3 448 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 E7EWF7 191 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 CHMP2AO43633 222 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 ORC4O43929 436 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 YY1P25490 414 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 MCM4P33991 863 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 RFC5P40937 340 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 COG7P83436 770 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 RAD51Q06609 339 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 ELAVL2Q12926 359 aaKnown RBP5.08□□□□□ -1.6
CCNL1-215ENST00000474539 PLD1Q13393 1074 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 CCL15Q16663 113 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 TBC1D10BQ4KMP7 808 aaPredicted RBP5.08□□□□□ -1.6
CCNL1-215ENST00000474539 SBK1Q52WX2 424 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 TBC1D9BQ66K14 1250 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 CHADLQ6NUI6 762 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms