RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 RAXQ9Y2V3 346 aa6.84□□□□□ -1.31
ATPAF1-204ENST00000474020 COL22A1Q8NFW1 1626 aaPredicted RBP6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 PTPDC1A2A3K4 754 aa6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 SOX1O00570 391 aaPredicted RBP6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 DHX15O43143 795 aaKnown RBP6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 GADD45BO75293 160 aaPredicted RBP6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 PDE8BO95263 885 aa6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 APPP05067 770 aa6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 POLR3DP05423 398 aaPredicted RBP6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 GNAT2P19087 354 aa6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 FSTP19883 344 aa6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 NLRP12P59046 1061 aa6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 GNL2Q13823 731 aaKnown RBP6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 TRIM29Q14134 588 aa6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 SART3Q15020 963 aaKnown RBP6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 HGSNATQ68CP4 663 aa6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 CDC37L1Q7L3B6 337 aa6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 FERMT3Q86UX7 667 aa6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 GALNT12Q8IXK2 581 aa6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 TTLL11Q8NHH1 800 aa6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 ASAP3Q8TDY4 903 aa6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 WASF1Q92558 559 aa6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 FAM129BQ96TA1 746 aa6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 PUS3Q9BZE2 481 aaKnown RBP6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 RNF208Q9H0X6 261 aa6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 SOX17Q9H6I2 414 aaPredicted RBP6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 ZBTB1Q9Y2K1 713 aa6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 SHANK3Q9BYB0 1731 aa6.83□□□□□ -1.32
ATPAF1-204ENST00000474020 TOGARAM1Q9Y4F4 1720 aa6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 GOLGA8BA8MQT2 603 aa6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 M0R2C6 588 aa6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 GPAA1O43292 621 aa6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 PRC1O43663 620 aa6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 EIF4EBP3O60516 100 aaPredicted RBP6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 IDH1O75874 414 aaKnown RBP6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 APOBRQ0VD83 1088 aa6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 SF3A1Q15459 793 aaKnown RBP6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 SLC9C2Q5TAH2 1124 aa6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 ANKRD34AQ69YU3 496 aa6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 BRAPQ7Z569 592 aa6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 NBPF11Q86T75 865 aa6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 ZNF34Q8IZ26 560 aa6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 FBXL16Q8N461 479 aa6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 LEO1Q8WVC0 666 aaPredicted RBP6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 UTP4Q969X6 686 aaKnown RBP6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 DDX11Q96FC9 970 aa6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 PDLIM2Q96JY6 352 aa6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 CITED4Q96RK1 184 aa6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 SEC62Q99442 399 aaKnown RBP6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 RUSC1Q9BVN2 902 aa6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 GREM2Q9H772 168 aa6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 CNNM2Q9H8M5 875 aa6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 RRAGDQ9NQL2 400 aaPredicted RBP6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 NOL7Q9UMY1 257 aaKnown RBP6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 RIPOR2Q9Y4F9 1068 aa6.82□□□□□ -1.32
ATPAF1-204ENST00000474020 SPATA31A1Q5TZJ5 1347 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 ROBO1Q9Y6N7 1651 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 KLF18A0A0U1RQI7 1052 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 A0A1W2PP55 124 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 ERICH2A1L162 156 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 MEGF11A6BM72 1044 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 KINO60870 393 aaKnown RBP6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 TPM2P07951 284 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 ESRRAP11474 423 aaPredicted RBP6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 ADORA1P30542 326 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 ADD2P35612 726 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 CRKLP46109 303 aaKnown RBP6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 EXOSC10Q01780 885 aaKnown RBP6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 ST3GAL1Q11201 340 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 SCRN1Q12765 414 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 RESTQ13127 1097 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 HLFQ16534 295 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 NFXL1Q6ZNB6 911 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 CCNJLQ8IV13 435 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 JMYQ8N9B5 988 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 SPATA5Q8NB90 893 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 SMARCC2Q8TAQ2 1214 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 OSBP2Q969R2 916 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 CHAMP1Q96JM3 812 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 C8orf76Q96K31 380 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 TMEM87BQ96K49 555 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 MYRFLQ96LU7 910 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 AGXT2Q9BYV1 514 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 KRT23Q9C075 422 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 NAT10Q9H0A0 1025 aaKnown RBP6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 NAPBQ9H115 298 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 CLSTN2Q9H4D0 955 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 RNF41Q9H4P4 317 aaPredicted RBP6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 STOML1Q9UBI4 398 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 ZKSCAN5Q9Y2L8 839 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 ATRNO75882 1429 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 RIC1Q4ADV7 1423 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 CARMIL3Q8ND23 1372 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 RTL9Q8NET4 1388 aa6.81□□□□□ -1.32
ATPAF1-204ENST00000474020 ZMYM6O95789 1325 aa6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 ANKRD36CQ5JPF3 1778 aa6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 CCDC69A6NI79 296 aa6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 METTL12A8MUP2 240 aa6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 GOLGA6L19H0YKK7 550 aa6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 JAK2O60674 1132 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms