RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 TRIM59Q8IWR1 403 aa7.81□□□□□ -1.16
CD46-213ENST00000471987 CXorf38Q8TB03 319 aa7.81□□□□□ -1.16
CD46-213ENST00000471987 KRTAP9-8Q9BYQ0 159 aa7.81□□□□□ -1.16
CD46-213ENST00000471987 GPRC5CQ9NQ84 441 aa7.81□□□□□ -1.16
CD46-213ENST00000471987 CYP26B1Q9NR63 512 aa7.81□□□□□ -1.16
CD46-213ENST00000471987 FUCA1P04066 466 aa7.8□□□□□ -1.16
CD46-213ENST00000471987 SSBP05455 408 aaKnown RBP eCLIP7.8□□□□□ -1.16
CD46-213ENST00000471987 MC3RP41968 323 aa7.8□□□□□ -1.16
CD46-213ENST00000471987 KCNC1P48547 511 aa7.8□□□□□ -1.16
CD46-213ENST00000471987 HTRA3P83110 453 aa7.8□□□□□ -1.16
CD46-213ENST00000471987 GTF2IRD2BQ6EKJ0 949 aa7.8□□□□□ -1.16
CD46-213ENST00000471987 SAPCD2Q86UD0 394 aa7.8□□□□□ -1.16
CD46-213ENST00000471987 GTF2IRD2Q86UP8 949 aa7.8□□□□□ -1.16
CD46-213ENST00000471987 CPA5Q8WXQ8 436 aa7.8□□□□□ -1.16
CD46-213ENST00000471987 ACTR10Q9NZ32 417 aa7.8□□□□□ -1.16
CD46-213ENST00000471987 SMAD7O15105 426 aaKnown RBP7.79□□□□□ -1.16
CD46-213ENST00000471987 THBDP07204 575 aa7.79□□□□□ -1.16
CD46-213ENST00000471987 ERCC5P28715 1186 aaPredicted RBP7.79□□□□□ -1.16
CD46-213ENST00000471987 SLURP1P55000 103 aa7.79□□□□□ -1.16
CD46-213ENST00000471987 FRMD5Q7Z6J6 570 aa7.79□□□□□ -1.16
CD46-213ENST00000471987 MRGPRX3Q96LB0 322 aa7.79□□□□□ -1.16
CD46-213ENST00000471987 TEPSINQ96N21 525 aa7.79□□□□□ -1.16
CD46-213ENST00000471987 NKX2-4Q9H2Z4 354 aa7.79□□□□□ -1.16
CD46-213ENST00000471987 BCAS3Q9H6U6 928 aa7.79□□□□□ -1.16
CD46-213ENST00000471987 MRVI1Q9Y6F6 885 aa7.79□□□□□ -1.16
CD46-213ENST00000471987 NTRK1P04629 796 aa7.78□□□□□ -1.16
CD46-213ENST00000471987 GNL2Q13823 731 aaKnown RBP7.78□□□□□ -1.16
CD46-213ENST00000471987 MBLAC2Q68D91 279 aa7.78□□□□□ -1.16
CD46-213ENST00000471987 IQCEQ6IPM2 695 aa7.78□□□□□ -1.16
CD46-213ENST00000471987 C6orf15Q6UXA7 325 aaPredicted RBP7.78□□□□□ -1.16
CD46-213ENST00000471987 LIPIQ6XZB0 460 aa7.78□□□□□ -1.16
CD46-213ENST00000471987 DCP2Q8IU60 420 aaKnown RBP7.78□□□□□ -1.16
CD46-213ENST00000471987 MARCH2Q9P0N8 246 aa7.78□□□□□ -1.16
CD46-213ENST00000471987 SH3D21A4FU49 640 aa7.77□□□□□ -1.17
CD46-213ENST00000471987 CACNB2Q08289 660 aaPredicted RBP7.77□□□□□ -1.17
CD46-213ENST00000471987 LARP1BQ659C4 914 aaKnown RBP7.77□□□□□ -1.17
CD46-213ENST00000471987 FAM178BQ8IXR5 827 aa7.77□□□□□ -1.17
CD46-213ENST00000471987 SMARCC2Q8TAQ2 1214 aa7.77□□□□□ -1.17
CD46-213ENST00000471987 PLEKHO2Q8TD55 490 aa7.77□□□□□ -1.17
CD46-213ENST00000471987 AP5M1Q9H0R1 490 aa7.77□□□□□ -1.17
CD46-213ENST00000471987 NPLOC4Q8TAT6 608 aa7.76□□□□□ -1.17
CD46-213ENST00000471987 ZNF526Q8TF50 670 aaPredicted RBP7.76□□□□□ -1.17
CD46-213ENST00000471987 FRS2Q8WU20 508 aa7.76□□□□□ -1.17
CD46-213ENST00000471987 DPF3Q92784 378 aa7.76□□□□□ -1.17
CD46-213ENST00000471987 ADAM7Q9H2U9 754 aa7.76□□□□□ -1.17
CD46-213ENST00000471987 LRP2BPQ9P2M1 347 aa7.76□□□□□ -1.17
CD46-213ENST00000471987 PRKAG3Q9UGI9 489 aa7.76□□□□□ -1.17
CD46-213ENST00000471987 A0A1B0GTL3 188 aa7.75□□□□□ -1.17
CD46-213ENST00000471987 HOXC12P31275 282 aa7.75□□□□□ -1.17
CD46-213ENST00000471987 INF2Q27J81 1249 aa7.75□□□□□ -1.17
CD46-213ENST00000471987 SV2CQ496J9 727 aa7.75□□□□□ -1.17
CD46-213ENST00000471987 E4F1Q66K89 784 aaPredicted RBP7.75□□□□□ -1.17
CD46-213ENST00000471987 TEX2Q8IWB9 1127 aa7.75□□□□□ -1.17
CD46-213ENST00000471987 ADGRG2Q8IZP9 1017 aa7.75□□□□□ -1.17
CD46-213ENST00000471987 BTN2A2Q8WVV5 523 aa7.75□□□□□ -1.17
CD46-213ENST00000471987 LGR4Q9BXB1 951 aa7.75□□□□□ -1.17
CD46-213ENST00000471987 BTG4Q9NY30 223 aa7.75□□□□□ -1.17
CD46-213ENST00000471987 SIT1Q9Y3P8 196 aa7.75□□□□□ -1.17
CD46-213ENST00000471987 C22orf46C9J442 243 aa7.74□□□□□ -1.17
CD46-213ENST00000471987 CELA3BP08861 270 aa7.74□□□□□ -1.17
CD46-213ENST00000471987 RPL11P62913 178 aaKnown RBP7.74□□□□□ -1.17
CD46-213ENST00000471987 DLX2Q07687 328 aaPredicted RBP7.74□□□□□ -1.17
CD46-213ENST00000471987 FXNQ16595 210 aa7.74□□□□□ -1.17
CD46-213ENST00000471987 ZNF227Q86WZ6 799 aa7.74□□□□□ -1.17
CD46-213ENST00000471987 CCDC140Q96MF4 163 aa7.74□□□□□ -1.17
CD46-213ENST00000471987 SPATA25Q9BR10 227 aa7.74□□□□□ -1.17
CD46-213ENST00000471987 PCDH18Q9HCL0 1135 aa7.74□□□□□ -1.17
CD46-213ENST00000471987 USP40Q9NVE5 1235 aa7.74□□□□□ -1.17
CD46-213ENST00000471987 TIMM13Q9Y5L4 95 aaPredicted RBP7.74□□□□□ -1.17
CD46-213ENST00000471987 B2RBV5 119 aa7.73□□□□□ -1.17
CD46-213ENST00000471987 SUSD5O60279 629 aa7.73□□□□□ -1.17
CD46-213ENST00000471987 DDAH1O94760 285 aa7.73□□□□□ -1.17
CD46-213ENST00000471987 ITGAVP06756 1048 aa7.73□□□□□ -1.17
CD46-213ENST00000471987 SNRPB2P08579 225 aaKnown RBP7.73□□□□□ -1.17
CD46-213ENST00000471987 CYP2C8P10632 490 aa7.73□□□□□ -1.17
CD46-213ENST00000471987 TCF3P15923 654 aa7.73□□□□□ -1.17
CD46-213ENST00000471987 GTF2A2P52657 109 aa7.73□□□□□ -1.17
CD46-213ENST00000471987 CYP4F3Q08477 520 aa7.73□□□□□ -1.17
CD46-213ENST00000471987 KCNAB2Q13303 367 aa7.73□□□□□ -1.17
CD46-213ENST00000471987 LCE5AQ5TCM9 118 aa7.73□□□□□ -1.17
CD46-213ENST00000471987 MROH9Q5TGP6 573 aa7.73□□□□□ -1.17
CD46-213ENST00000471987 ETV3LQ6ZN32 361 aa7.73□□□□□ -1.17
CD46-213ENST00000471987 SEC14L1Q92503 715 aa7.73□□□□□ -1.17
CD46-213ENST00000471987 DIO2Q92813 273 aa7.73□□□□□ -1.17
CD46-213ENST00000471987 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.73□□□□□ -1.17
CD46-213ENST00000471987 MYO1BO43795 1136 aa7.72□□□□□ -1.17
CD46-213ENST00000471987 CPP00450 1065 aa7.72□□□□□ -1.17
CD46-213ENST00000471987 SCG5P05408 212 aa7.72□□□□□ -1.17
CD46-213ENST00000471987 ETFBP38117 255 aa7.72□□□□□ -1.17
CD46-213ENST00000471987 SLC6A11P48066 632 aa7.72□□□□□ -1.17
CD46-213ENST00000471987 SKOR2Q2VWA4 1001 aaPredicted RBP7.72□□□□□ -1.17
CD46-213ENST00000471987 NT5DC1Q5TFE4 455 aa7.72□□□□□ -1.17
CD46-213ENST00000471987 TTLL7Q6ZT98 887 aa7.72□□□□□ -1.17
CD46-213ENST00000471987 RIOX2Q8IUF8 465 aa7.72□□□□□ -1.17
CD46-213ENST00000471987 CARFQ8N187 725 aa7.72□□□□□ -1.17
CD46-213ENST00000471987 ZBTB8AQ96BR9 441 aa7.72□□□□□ -1.17
CD46-213ENST00000471987 NOX5Q96PH1 765 aa7.72□□□□□ -1.17
CD46-213ENST00000471987 NTMQ9P121 344 aa7.72□□□□□ -1.17
CD46-213ENST00000471987 CCDC9Q9Y3X0 531 aaKnown RBP7.72□□□□□ -1.17
CD46-213ENST00000471987 MEFVO15553 781 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms